Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g02531 AATATTTAACACTATCTGAATTCAAGCGGTTACATGAATATATATTGAAGAAGAATAAAGAACGAAATGGAAGGCTTTACATTGCTTCTGTTCTGCCTTGCCTTGCTGAATAATGTACAAGGCGACACAGTGAGAGATACTATTAATACATTGCAATCTATCAAAGATGGCCAGATCATAGTGTCACCTGGCAAAACCTATGCACTGGGATTCTTCAGTCCAGGAAATTCCAAGAACCGTTATGTGGGAATTTGGTATAATGAGGTCTCAACACAGACTGTAGTATGGGTTGCAAACAGAGACAACCCTCTGACAGACTCGTCAGGGGTTTTGAAGCTCGATGAAACTGGAGTTCTAGTCCTTCTCAACCATAACAAGAGTGTCATCTGGTCTTCCAACACAACAAGATCGGTGCGATATCCGGTTGCAAAGCTTTTGGATTCTGGAAACTTCATTGTGCAAGATAACAACAACAATAATGACCCAAAATATTTACTGTGGCAGAGTTTTGATTTTCCTGGGGACACAATCTTGCCGGGACAGAAGTTTGGAAGAAATCTAGTTACCGGCCTGAATCGATACATGTCGTCATGGAATAACTCTGATGATCCATCTAAAGGTGTATTTAGTTATCAAATTGATGTTAACGGATATCCACAGTTCATTCTAAGAAAAGGCACTTTCAAAAGATATCGTTTTGGATCGTGGAATGGTATTCAGTTTAGTGGGGCACCTATGTTGAAACAAAGTGCTATTACTAGATTTAATTTTATTTCTGATGAGGAAGAGCTATATTTTAGTTTTGAGCTTACCAACAAATCAGTTTTTCATAGGATGGTGTTAACAACAGATGGATTCATCAATGGGACTTATTGGAACAATGACGGAAAAGTTTGGAACTTGCATGCACGAATTCCTGTGGATGACTGTGATAACTATGACAAATGTGGAGCCTATGCAAGCTGTAATATAAACAACATTCCTCCTTGTAATTGCTTGGATGGATTTATACCGAAAACGGCTGATATATACGGTGGTTGTGTCAGGAGAACTTCACTGACTTGTCATGGAGACAGGTTTTTGAAGCTTTCAGGGTTGAAATTACCAGACACGGAGAGATCCTGGTTTGATAGAAATACTAGCCTTGAGGATTGCAGGATATTGTGCATGAAGAATTGTTCCTGTACAGCATATGCAGCCTTAGACGTCAGTAAAGGGCCAACTGGGTGTTTACTCTGGTTTGGTGATCTGCTTGACATAAGAGAATTGACTGATGTTGATGAAGATATATACATAAGAATGGCTGAGACAGAAATAGAAGCTATCGAAAGAAAGCAGTCACACAAATCCAACATCTGGAAGCCAGGGACTGCTTTCATAAGTTGTGCGTTGTTTGTTGGAATTTTAAGCCTATGCTTAACCTTCATCATTTATAGACGGTGGAAGACATGGCATAAAGGCAAAAAGAACAAAGGTAATCTAGAAAGAGATGACAACGTAATAAATGAGCACGAGAAGGAAGATCTGGAGTTACCCATGTTTGAGTTGTCTACCATTACTTCTGCAACGAATAACTTTTCACCTGACAACAAGTTAGGAGAAGGTGGTTTTGGATCAGTTTATAAGGGTATTCTCAACGATGGAGGAGAAATAGCAGTCAAAAGGCTGTCAAAAAATTCTAAACAAGGACTTCAGGAGTTCAAAAATGAAGTTATGCATATTGCAAAACTTCAGCACAGGAACTTAGTGAGGCTATTAGGGTACTGCACTCAAGCAGAAGAAAGATTACTTATTTATGAATTTATGCCTAACAAAAGCTTGGATTCCTTCATATTTGATGAAAACAAGAGCATGTTACTAGATTGGCCAAGGCGGTTGCTAATCATCAATGGGATTGCTCGAGGTCTTCTTTATCTTCACCAAGATTCTAGGCATAGAATAGTTCATAGAGATCTCAAAGCTGGAAATGTTTTGTTGGACAGCGAAATGAACCCAAAAATCTCAGACTTTGGACTGGCTAGAAGCTTTGGAGGGAATGAAATTGAAGCAACCACAAAGCATGTAGTTGGAACCTATGGCTATCTGCCTCCAGAGTATATAATTGATGGAGCTTATTCAACAAAATCAGATGTTTTCAGTTTTGGTGTGTTGATATTGGAGATAGTGAGTGGGAAGAGAAATAAAGGATTCTGTCATCAAGATAATCTTCTGGCACATGTATGGAGACTATTTACTGAAGGCAAATGCTCTAAAATAGTTGACGGAACAATAATAGACTCACTCAATTTATCCAAAGCACTAAGATTAATTCATGTGGGACTACTGTGTGTGCAACTAAGTCCAGATGACAGGCCAAACATGTCATCTGTTGTTTTGATGCTGAGCAGTGAATCTGCACTGCCTCAGCCAAACTTGCCTGGATTCTTTACAAGTACAAGTATGGCTGGTGATAGTTCTTCATCAAGCAGTTATAAACAATACACAAATAATGACATGACAATTAGTATAATGACTCCTAGATAGGTTGCATTTCAGACTTTATCTTGAAGTGGTTTGATACGTGATAGTAGAC 2572 0.3876 MEGFTLLLFCLALLNNVQGDTVRDTINTLQSIKDGQIIVSPGKTYALGFFSPGNSKNRYVGIWYNEVSTQTVVWVANRDNPLTDSSGVLKLDETGVLVLLNHNKSVIWSSNTTRSVRYPVAKLLDSGNFIVQDNNNNNDPKYLLWQSFDFPGDTILPGQKFGRNLVTGLNRYMSSWNNSDDPSKGVFSYQIDVNGYPQFILRKGTFKRYRFGSWNGIQFSGAPMLKQSAITRFNFISDEEELYFSFELTNKSVFHRMVLTTDGFINGTYWNNDGKVWNLHARIPVDDCDNYDKCGAYASCNINNIPPCNCLDGFIPKTADIYGGCVRRTSLTCHGDRFLKLSGLKLPDTERSWFDRNTSLEDCRILCMKNCSCTAYAALDVSKGPTGCLLWFGDLLDIRELTDVDEDIYIRMAETEIEAIERKQSHKSNIWKPGTAFISCALFVGILSLCLTFIIYRRWKTWHKGKKNKGNLERDDNVINEHEKEDLELPMFELSTITSATNNFSPDNKLGEGGFGSVYKGILNDGGEIAVKRLSKNSKQGLQEFKNEVMHIAKLQHRNLVRLLGYCTQAEERLLIYEFMPNKSLDSFIFDENKSMLLDWPRRLLIINGIARGLLYLHQDSRHRIVHRDLKAGNVLLDSEMNPKISDFGLARSFGGNEIEATTKHVVGTYGYLPPEYIIDGAYSTKSDVFSFGVLILEIVSGKRNKGFCHQDNLLAHVWRLFTEGKCSKIVDGTIIDSLNLSKALRLIHVGLLCVQLSPDDRPNMSSVVLMLSSESALPQPNLPGFFTSTSMAGDSSSSSSYKQYTNNDMTISIMTPR 818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g02531 818 Pfam Domain of unknown function (DUF3403) 773 818 IPR021820 GO:0004674
Pste3g02531 818 Pfam PAN-like domain 333 398 IPR003609 -
Pste3g02531 818 SMART blect_4 29 151 IPR001480 -
Pste3g02531 818 Gene3D Phosphorylase Kinase; domain 1 478 579 - -
Pste3g02531 818 CDD PAN_AP_plant 329 413 - -
Pste3g02531 818 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 19 148 - -
Pste3g02531 818 Gene3D Transferase(Phosphotransferase) domain 1 580 780 - -
Pste3g02531 818 Gene3D - 18 148 IPR036426 -
Pste3g02531 818 CDD B_lectin 30 151 IPR001480 -
Pste3g02531 818 ProSiteProfiles Protein kinase domain profile. 504 783 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g02531 818 SMART ntp_6 333 412 IPR003609 -
Pste3g02531 818 SUPERFAMILY alpha-D-mannose-specific plant lectins 72 182 IPR036426 -
Pste3g02531 818 SMART serkin_6 504 772 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g02531 818 Pfam D-mannose binding lectin 71 176 IPR001480 -
Pste3g02531 818 ProSitePatterns Serine/Threonine protein kinases active-site signature. 625 637 IPR008271 GO:0004672|GO:0006468
Pste3g02531 818 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 468 579 - -
Pste3g02531 818 SUPERFAMILY Protein kinase-like (PK-like) 490 805 IPR011009 -
Pste3g02531 818 ProSiteProfiles PAN/Apple domain profile. 333 413 IPR003609 -
Pste3g02531 818 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 8 763 - -
Pste3g02531 818 Pfam S-locus glycoprotein domain 209 317 IPR000858 GO:0048544
Pste3g02531 818 CDD STKc_IRAK 510 772 - -
Pste3g02531 818 Pfam Protein tyrosine and serine/threonine kinase 507 769 IPR001245 GO:0004672|GO:0006468
Pste3g02531 818 PIRSF SRK 2 818 IPR024171 GO:0004674
Pste3g02531 818 ProSitePatterns Protein kinases ATP-binding region signature. 510 532 IPR017441 GO:0005524
Pste3g02531 818 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 580 780 - -
Pste3g02531 818 ProSiteProfiles Bulb-type lectin domain profile. 23 144 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g02531 Pste-Chr3 18150084 18154340 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g02531 492 818 Receptor kinase-like Gene Family AT4G11480 54.971 5.10e-117 367
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pste3g02531 PK_Tyr_Ser-Thr 2.2e-47 CL0016