Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g02530 ATGGAAATCTTCAAGGCTTTGGTTTTGTGCTCTCTTCTGTTGAACTTCATAGTACCAGGCTTCCATGCCTTTGACACCATTGCTCCTGGCCAATCTGTCAAGGATAATGAGACTCTTGTTTCAGCAGAAGGGACTTTTGAAGCTGGGTTTTTCAACTTTGCAGACCCAACTAACCAATACTTTGGAATATGGTACAAGGATATTTCTCCAAGAACATTTGTATGGATAGCCAATAGAGATACCCCAGTTGGGAACTCCTCAGGAGTTTTAAATGTCACTGATGGGGGTAATCTTGTTATTTTGAATGTCTCAGGGGACATAGTCTGGTCCTCTAATACATCAACAACTGCAAAGAAACCGGTTTTGCAACTCTTGGATACCGGCAACCTTGTTGTGAAGGAAGAAAGCAACCCTGAGAATCTTTTGTGGCAGAGTTTTTATCTTCCTGGGGACACTTTGCTTCCAGGTATGCGAATTCGAAGTAGCATGGTGAGTGGTACCTTTACATCTCTGACATCTTGGAGAGATTCACAAGAACCTGGTAAAGGTGAGTATTCGTATCACATAGATACTCATGGTTTTCCTCAAGTGGTGATCACAAAGGGAGGGAAACTGTTGTATAGAGCAGGTTCATGGAATGGTAATATTTTATCTGGGATTCCTTCTGAAACATTGTACAAAGACTTCAATTTCTCTTTTGTAATAACTGAGCAGGAGGTGTCTTACGGATATGAACTCCTGAATCAGTCAATTGTTTCGAGATACATGATCACATTAACAGGCCAAATACAGCGTTTCATTTTGTCTGATCAGACAAACAATTGGCAGCTTTTCTACTCTGGTCCTGCAGACCGGTGTGATAATTATAACGTTTGTGGTGTAAATTCTAATTGTGACGTCGATAACTCACCAACATGTGAATGCCTTCAGGGTTTCATTCCAAAATCTCCGGAAAATTGGAATTCACAAAATTGGACTGATGGGTGTGTTAGGAGAGTTAATTTAGATTGTAGCAATAGTGACGGCTTTCTGAAGTATCAGGGATTGAAGTTGCCGGACACATCAGCATCATGGTTTGATAAGAGCATGAATCTGAAGGAATGTGAGAGTATCTGTCTGAAAAACTGCTCCTGCACAGCATATGCTAATTTAGACATCAGAGATGGTGGAAGTGGATGCTTGCTTTGGTTTAACAACATTGTGGATGTAAGAAAACTATCCTCTGGAGGACAAGACCTTTACATAAGAATGGCAGCTTCAGAACTAGATCATAACAAAGACTTGAACAAGAAGAAGCTTGCAGGTATTCTTGTAGGCTGTACCCTCTTCATTATTATCATGGTAATATTGGTAGTAACCATTTTTCGTTGGAAAAAGCTCAAGAAGGCAGGGAAGAACCAAATAGTTAGCGGGAAGAATCACACTGATAACACACAGAAGGGAGAAATTGACATACCAATATTTGATTTTTCAACCATAGCTAATGCAACTAGTAACTTTTCCATTGGTAACAAATTGGGAGAAGGTGGATTTGGACCAGTTTACAAGGGTACATTGTCAAATAGCCAAGATATAGCTGTGAAACGTCTTTGCAATAATTCAGGACAAGGACCAAAAGAGTTCATAAATGAAGTAGTGCTAATTGCCAATCTTCAGCACCGAAATCTCGTGAAGCTTTTGGGATGTTGCATTCAAGAAGATGAGAGAATCTTGATATATGAATTCATGACTAACAGAAGTTTGGACTATTTTATTTTTGATGAAGCTAGAAAAAGTTTGCTGCATTGGCCTCAGCGCTTCCAAATTATTTGTGGTATTGCCCGTGGTCTTCTCTACCTTCATGAAGATTCTAGATTAAGGATTATCCATAGAGATCTCAAGACCAGCAATATTCTTCTAGATGAAAATATGAATCCAAAAATATCCGACTTTGGTCTTGCTAGAACATTTGGAGGAGATGAAGTTGAAGGCAAAACAAAGAGAGTAGTAGGAACCTATGGATATATTTCTCCAGAATATGCAGCCCGTGGGAATTTCTCAGTGAAATCTGATGTCTTCAGTTTTGGTGTTATTGTACTAGAGACAGTTTGTGGAAAGAAGAACAGGGAATATTTTGACGATCATGATCATGGTCTTCTTGGACATGCATGGAGACTGTGGTGTGAAGAAAAGTCAATGGAGCTGATAGATGAATCACTAGGCGAACCAATAGGTCTAGCTGAAGCCGATGTGTTGAGATGTATTCAGATCGGGCTTTTATGTGTACAAGACAGACCAGAGGATAGGCCAGACATGTCAGCTGTAGTTCTCATGCTGAATGGTGAGAAATCATTGCCTAGGCCAAGGGAACCTGCCTTTTATCCACATCAATCTGGTTCTTCATCTGGAAATAGTAAGCTGCAATCAACCAATGAGATTTCTATCTCATTGTTAGATGCAAGATAGTTTATATGGAATTGTAGACTTCAAGGACTGAAGATCCCAATGAAAACATTTCTCCAACTGAAACTATGATCTGACGATCATTTATAGGTTGCACTGTATTAATTGTGTCTGTGACAGTGGTGGTTCCTATATAATTCAGCAGGATGACAAGTCCAAACAGAAGGAAGAATCTGAAGATCTCCCTCACCATGTGTCGATAGTCCCACCAGCGGTAGTAGATTCTGCAAATGCACATAGTGAAAAGTTATTCGTTGCAGAAGTAATGGTAGACAACTCAAACATGGGTAACTCCAGATCTTCCTTCTCGTGCTCATTTATTACGTTGTCATCTCTTTCTAGATTACCTTTGTTCTTTTCTGCAATGAAGTAATTGGTGTGTGTAAAGAAAAAAGAAGTTGAAATATAGAGTATGCTCAGTCTTCCATACTCTTTCTTTCTTTATCTGCCCCATCCCAAATCTAAAACAGAATAGAAGCTAACTTAATTTGCACACCCTATTTTGCCGCCATTGACAACAGGGCTC 2968 0.3962 MEIFKALVLCSLLLNFIVPGFHAFDTIAPGQSVKDNETLVSAEGTFEAGFFNFADPTNQYFGIWYKDISPRTFVWIANRDTPVGNSSGVLNVTDGGNLVILNVSGDIVWSSNTSTTAKKPVLQLLDTGNLVVKEESNPENLLWQSFYLPGDTLLPGMRIRSSMVSGTFTSLTSWRDSQEPGKGEYSYHIDTHGFPQVVITKGGKLLYRAGSWNGNILSGIPSETLYKDFNFSFVITEQEVSYGYELLNQSIVSRYMITLTGQIQRFILSDQTNNWQLFYSGPADRCDNYNVCGVNSNCDVDNSPTCECLQGFIPKSPENWNSQNWTDGCVRRVNLDCSNSDGFLKYQGLKLPDTSASWFDKSMNLKECESICLKNCSCTAYANLDIRDGGSGCLLWFNNIVDVRKLSSGGQDLYIRMAASELDHNKDLNKKKLAGILVGCTLFIIIMVILVVTIFRWKKLKKAGKNQIVSGKNHTDNTQKGEIDIPIFDFSTIANATSNFSIGNKLGEGGFGPVYKGTLSNSQDIAVKRLCNNSGQGPKEFINEVVLIANLQHRNLVKLLGCCIQEDERILIYEFMTNRSLDYFIFDEARKSLLHWPQRFQIICGIARGLLYLHEDSRLRIIHRDLKTSNILLDENMNPKISDFGLARTFGGDEVEGKTKRVVGTYGYISPEYAARGNFSVKSDVFSFGVIVLETVCGKKNREYFDDHDHGLLGHAWRLWCEEKSMELIDESLGEPIGLAEADVLRCIQIGLLCVQDRPEDRPDMSAVVLMLNGEKSLPRPREPAFYPHQSGSSSGNSKLQSTNEISISLLDAR 814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g02530 814 ProSitePatterns Serine/Threonine protein kinases active-site signature. 621 633 IPR008271 GO:0004672|GO:0006468
Pste3g02530 814 Gene3D Hepatocyte Growth Factor 334 416 - -
Pste3g02530 814 Pfam D-mannose binding lectin 72 175 IPR001480 -
Pste3g02530 814 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 336 417 - -
Pste3g02530 814 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 576 780 - -
Pste3g02530 814 ProSiteProfiles PAN/Apple domain profile. 337 418 IPR003609 -
Pste3g02530 814 SMART ntp_6 338 417 IPR003609 -
Pste3g02530 814 Gene3D - 21 146 IPR036426 -
Pste3g02530 814 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 464 575 - -
Pste3g02530 814 CDD B_lectin 31 146 IPR001480 -
Pste3g02530 814 MobiDBLite consensus disorder prediction 780 801 - -
Pste3g02530 814 SMART blect_4 30 149 IPR001480 -
Pste3g02530 814 SMART serkin_6 500 772 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g02530 814 Pfam PAN-like domain 337 403 IPR003609 -
Pste3g02530 814 CDD PAN_AP_plant 333 418 - -
Pste3g02530 814 ProSiteProfiles EGF-like domain profile. 282 318 IPR000742 -
Pste3g02530 814 Gene3D Transferase(Phosphotransferase) domain 1 576 780 - -
Pste3g02530 814 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 14 759 - -
Pste3g02530 814 Pfam Protein tyrosine and serine/threonine kinase 501 769 IPR001245 GO:0004672|GO:0006468
Pste3g02530 814 ProSiteProfiles Protein kinase domain profile. 500 786 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g02530 814 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 21 146 - -
Pste3g02530 814 SUPERFAMILY Protein kinase-like (PK-like) 485 793 IPR011009 -
Pste3g02530 814 Gene3D Phosphorylase Kinase; domain 1 473 575 - -
Pste3g02530 814 ProSiteProfiles Bulb-type lectin domain profile. 24 145 IPR001480 -
Pste3g02530 814 PIRSF SRK 1 814 IPR024171 GO:0004674
Pste3g02530 814 CDD STKc_IRAK 506 774 - -
Pste3g02530 814 SUPERFAMILY alpha-D-mannose-specific plant lectins 59 213 IPR036426 -
Pste3g02530 814 Pfam S-locus glycoprotein domain 207 316 IPR000858 GO:0048544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g02530 Pste-Chr3 18144434 18152461 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g02530 434 789 Receptor kinase-like Gene Family AT4G23190 51.233 1.05e-121 377
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pste3g02530 PK_Tyr_Ser-Thr 1e-45 CL0016