Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g02529 TCACAATAAATTATATGGATAGCAATGAGATGATAGTGTGGTGTTCTCTCTTACTTTTTTCCTTCGTACCCACCATTACTGCACTGAGTAGTATCACTCCAAATCAGCCCTTACATCACAATGAATCCTTGGTTTCTGCATCTGGAACTTTTGAAGCAGGATTCTTCAGCCCTGGAAGTTCCCAGAGAAAATACTTTTGCATATCTTACAAGAAAATGTCACCTAGAACAATCGTGTGGGTGGCCAACAGAAACACCCCATTAGATAACTCCACAGGAGTTTTCAAAGTCAGTGATGGGGGAAATCTTGTCGTACTTGATGGCACAGGTGTAAGTGTTTGGTCATCCAATGCATCAACCACGGCTCAGAATCCAATTGTGCAGCTCTTGGACTCTGGCAACCTCGTTGTAAAAGATGGTGGAACAAATAGCCCAGAGAAGGTTGTGTGGCAAAGCTTTGATTATCCTTGTGATACTTTACTTCCTGGGATGAAACTCAAGAGCAGTTTAGTGACAGGTGCTCACAGTTCTCTAACGTCATGGAGGAACACAGAAGATCCTGCTCTTGGGGAATTTTCATTGTATATTGACACTCATGGTTTTCCTCAGAGAGTGACTACAAAGGGAGGGACTTGGTTGTATAGAGCTGGTTCATGGAATGGTTATCAATTTTCTGGTGTTCCTTGGAATTTGTTGCATAATTTCTTCAATTACTATTTTGTGTTAACCCGGGAGGAAGTGTATTATGAGTATGAACTCTTGGAACCTTCAGTTGTTACAAGGTTTGTGATCAACCAAGCAGGGCTTGATCAACGTTTCACATGGTCAGAGAGGACTAAGAGTTGGGAGCTTTTTGCTTCTGGCCCCAGGGAACAGTGTGAAAACTATGCCTTATGTGGTGTAAATGCTGTTTGCAATGTTAATAGCTACCCCATATGTGGATGCCTGAAGGGATTTCTTCCCAAGTTTAGAGAAAAGTGGAGATCAATGGATTGGTCTGATGGGTGTGTTCGGCAAATGAATCTGAGTTGTGACAATGGTGATGGGTTTGTTAAGCATGAGGGAATGAGATTGCCAGACACATCTTCTTCCTGGTTTAACACAAGCATGAGCCTTGATGAATGTGAGAGAGTGTGTTTGAAAAACTGCTCTTGCACAGCATACACAAGTTTAGATGTCAGAAGTGGTGGGACTGGCTGCTTGCTTTGGTTTGGTAACATTGTGGATATGGAAAAAATTGTCTCCCAAGGACAAGACATTTACATACGAATGGCTGCATCAGAGCTAGACCAAACCTGGCATAAAAGGCACATTAACAAAAAGGTTGTGGTGATTCTGGTAGCAATTACTATGTTCACCATAGGCTTAATATTGGGATCAGTCATATACATACGGCGAAAACTTGAAAAATCAGTGTTCACTAAGAGAATAAACAATCACCATAATAAAACCATTAACATCTTGTCACTCGTTTACTATCTGTCTGCTGCCATATCAGGAAAGACAAACTCAATCGATCGGATGCATCATACTATAAAACATGAGAAAAAAGACACTGACTTACCAATCCTTGATTTATCAACCATTGATAATGCCACTAGTAACTTCTCTGCGAGTAACATATTGGGAGAAGGAGGATTTGGACCAGTTTACAAGGGTGTGCTAGCAAATGGACACGAGATCGCTGTAAAGAGGCTTTCGAAAAATTCAGGACAAGGATTAGATGAGTTCAGAAATGAAGTTGTGTTGATAGCCAATCTTCAGCACAGGAATCTTGTAAAGATTCTTGGGTGTTGTACTCAAGATGATGAGAGAATATTGATTTATGAATTCATGCCTAACAGGAGCTTGGATCTTTACATTTTTGATCAATTAAGAAAAAAGTTATTGGATTGGAACAAACGCTTCCAAATTATAAGTGGCATTGCTAGAGGGCTTGTCTATCTTCATCATGATTCTAGATTAAGGATCATCCACAGAGATATCAAAACCAGCAATATTCTTCTTGATAATGATATGAATCCAAAGATTTCAGACTTTGGACTAGCAAGGATGCTTGTTGGTGATCACACCAAAGCCAATACGAAAAGAGTAGTGGGAACTCATGGTTATATGCCTCCTGAGTATGCAGTGTATGGATCTTTCTCTGTGAAATCAGACGTCTTTAGCTTTGGTGTTATTGTACTAGAGATAGTTAGTGGGAAGAAAAACACACAATTTCTTGATCCATTCAATCAACTTAACCTCATAGGGCATGCGTGGAGATTGTGGAGTGAAGGGAGGCCTTTGGAGCTGATTGATGAATCACTAGGTGATTCAATAGTTGAAAGTGAAGTAATGAAAATAGTTCATGTGGGACTCTTATGCGTTCAAGAGAGACCAGAGGATAGGCCCAACATGTCAAATGTTGTTCTAATGCTGAATGGTGAAGGACCATTGCCCAGGCCCAAGCAGCCCGCATTTTATCCACACCATGAAGACTATTCTTCATCTGGCAAGTGTGAATACAGCTCAAATGAAATGTCCATCACGTTAGAGGCAAGATAGTAACCCTAAACTAATCAAATAATGTCTCTAGTTTCAGGATTACAGTTTTTTATTTGTTGTACAATGACGAAATCCTTTACTTTTAACATCCTATGCTTTTATAATTGTC 2655 0.4008 MDSNEMIVWCSLLLFSFVPTITALSSITPNQPLHHNESLVSASGTFEAGFFSPGSSQRKYFCISYKKMSPRTIVWVANRNTPLDNSTGVFKVSDGGNLVVLDGTGVSVWSSNASTTAQNPIVQLLDSGNLVVKDGGTNSPEKVVWQSFDYPCDTLLPGMKLKSSLVTGAHSSLTSWRNTEDPALGEFSLYIDTHGFPQRVTTKGGTWLYRAGSWNGYQFSGVPWNLLHNFFNYYFVLTREEVYYEYELLEPSVVTRFVINQAGLDQRFTWSERTKSWELFASGPREQCENYALCGVNAVCNVNSYPICGCLKGFLPKFREKWRSMDWSDGCVRQMNLSCDNGDGFVKHEGMRLPDTSSSWFNTSMSLDECERVCLKNCSCTAYTSLDVRSGGTGCLLWFGNIVDMEKIVSQGQDIYIRMAASELDQTWHKRHINKKVVVILVAITMFTIGLILGSVIYIRRKLEKSVFTKRINNHHNKTINILSLVYYLSAAISGKTNSIDRMHHTIKHEKKDTDLPILDLSTIDNATSNFSASNILGEGGFGPVYKGVLANGHEIAVKRLSKNSGQGLDEFRNEVVLIANLQHRNLVKILGCCTQDDERILIYEFMPNRSLDLYIFDQLRKKLLDWNKRFQIISGIARGLVYLHHDSRLRIIHRDIKTSNILLDNDMNPKISDFGLARMLVGDHTKANTKRVVGTHGYMPPEYAVYGSFSVKSDVFSFGVIVLEIVSGKKNTQFLDPFNQLNLIGHAWRLWSEGRPLELIDESLGDSIVESEVMKIVHVGLLCVQERPEDRPNMSNVVLMLNGEGPLPRPKQPAFYPHHEDYSSSGKCEYSSNEMSITLEAR 843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g02529 843 Gene3D - 20 148 IPR036426 -
Pste3g02529 843 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 7 789 - -
Pste3g02529 843 ProSiteProfiles PAN/Apple domain profile. 339 420 IPR003609 -
Pste3g02529 843 SUPERFAMILY Hairpin loop containing domain-like 343 399 - -
Pste3g02529 843 ProSiteProfiles Bulb-type lectin domain profile. 24 145 IPR001480 -
Pste3g02529 843 Pfam Protein tyrosine and serine/threonine kinase 534 800 IPR001245 GO:0004672|GO:0006468
Pste3g02529 843 CDD PAN_AP_plant 336 420 - -
Pste3g02529 843 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 19 148 - -
Pste3g02529 843 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 607 809 - -
Pste3g02529 843 ProSitePatterns Serine/Threonine protein kinases active-site signature. 652 664 IPR008271 GO:0004672|GO:0006468
Pste3g02529 843 SMART ntp_6 340 419 IPR003609 -
Pste3g02529 843 Pfam S-locus glycoprotein domain 209 317 IPR000858 GO:0048544
Pste3g02529 843 CDD B_lectin 30 151 IPR001480 -
Pste3g02529 843 Gene3D Transferase(Phosphotransferase) domain 1 607 806 - -
Pste3g02529 843 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 495 606 - -
Pste3g02529 843 CDD STKc_IRAK 537 804 - -
Pste3g02529 843 SMART serkin_6 531 800 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g02529 843 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 338 419 - -
Pste3g02529 843 SMART blect_4 30 151 IPR001480 -
Pste3g02529 843 SUPERFAMILY Protein kinase-like (PK-like) 516 819 IPR011009 -
Pste3g02529 843 Gene3D Phosphorylase Kinase; domain 1 504 606 - -
Pste3g02529 843 Pfam D-mannose binding lectin 72 177 IPR001480 -
Pste3g02529 843 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 182 IPR036426 -
Pste3g02529 843 Pfam PAN-like domain 339 405 IPR003609 -
Pste3g02529 843 PIRSF SRK 3 843 IPR024171 GO:0004674
Pste3g02529 843 Gene3D Hepatocyte Growth Factor 335 419 - -
Pste3g02529 843 ProSiteProfiles Protein kinase domain profile. 531 816 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g02529 Pste-Chr3 18124234 18128051 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g02529 519 827 Receptor kinase-like Gene Family AT3G45860 56.090 1.07e-119 375
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pste3g02529 PK_Tyr_Ser-Thr 2.9e-46 CL0016