Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g02524 CACACACGCAGAAAAGCATAGCCGTCTTTTTATTTATGCCCACAATGTGAACACTTCAAAAATGACGTTCTGGCCGTTGCTTGCAGAGAGTGTCTCAAACCAAACCCAAAACCAATGCCCACAACATACAAAAAAAAAAAAAACCCTCTCTGATTGTCCGTTTATTTTCAGAATTGCCCTTCTCTCTCTGTTTCTGTTTCTGTTTTCTTCTCTCCTCCTCTGGCCATGATTGGTAGTAAGGATCGTGTTGCTGACTCTGACGGCGAGAACTCTAGGAGCAAGCTTTCAAGGCACAATTTTGAGGCTAACAAGGAGTACCCAGATGAAAAAGGTGTTGAATTTCTGAGAGATTCAGAAGTGGGTGGTGGTGAGGGGGTTCTTCACTCAAAACCCACCAAGATTATTGTTGGTGGTAACTCGGGTTTGCAAGAGTTGACCTTCAGCTACCTTTGTGACAACCCAAAATTGAGTCTTGCTGAGAAAGAGATTCCTGGGAAAAGCTTGCTGAATTCCTTGGAAAAAATGAGCCACAAAGGGAAAGAGGTTGTGGTCTGCGAGGATTCGAATCAGGATGGAAAATGGGTGGAACGAGATTTCCTCAGCTTGAGTGAGCCGATAGAGGATTCTTCGAAGAGATCCCTCGAGGAAGTTGTTGAGAGGGAGAGTAATAGGGAGAAGAAGCCAAAACTGGAGACACTTAATCTCTCTCTTGCTTTACCTGATGTGTCACTTTCTCTCACAGCTTCAAACGCCTTGCAAAATGGTGACCAACAACCGGTTAGGACTAAACCTTGCTGGCCATCCACTACTCACAATTCTTATTCCAATGACTACACTACAGCTTCTTTGTCTTACTCTTATTCCCACCCTTTCTCACACAACCCAAGCTGTTCACTCACCCGCAATTCTACTGATAATTTTGAGTACTCAGTGAGCAAAGATGACCAAATTTGGAACTGTGGGGAGGGGACTAATGGGTCTGTGCATAGTAGGTTCAAGCCAATTGGAGATGGGGTTGGTTTGTCCAACCATGGTGGTGCTGGTATTAGTTCCTTTATGCAAGGTAATAGTCAGTATAAAACTACTAGTTCAGATAATCATTCCTTTTTTCCTTCAGAATTGCCTGCAAGGCCAAGGTTTGAGGCTCAGTCTGGGGACTCAAGGGGGAGGAATTCTGAGAATCTGAGAATCTTGGAAGGCTTGGATGATGGAAAGGTAAGGAAGCTTTCCAGACCGGAGAGAATTGTAAGGGAAATTGTTTCAGAGTCCATACCTGTCATGGCATTGACAATTCAAGAGCTTGCTGATGATGTGATATCATCAACTAAGGAATACTTGAAGAATCTCATTGAGAAGCCTGACAAGAAAGAGGAAATGGTAGGCCTCCAAAACCGGCTTGAGAGACGATCTGACCTTACCAAGGAGAGTCTTTCAAAGTGCCATAAAGTACAATTAGAAGTTTTGGTGGCTGTCAAGATGGGGGTTGCTAGCTTCCTATCTAGCAAAGTTCCCTTGTCTGAGATGGTAGAGATTTTCTTGTATAAGAGATGTAGAAATGTAACCTGCAAGCATTTGCTTCCTGTTGATGATTGTGACTGCAAGATTTGCTCTGGACATAAGGGCTTTTGCAGTTCTTGCATGTGTCCTGTCTGTTTGAACTTTGATTGTGCAAGTAACACCTGTAGTTGGATTGGATGTGATGTTTGTTCCCATTGGTGCCATGCTACCTGTGGCATTCTGAGGAATCTTATCAAGCCTGGCCCAAGCTTGAAAGGACCTTCGGGAACCTCAGAGATGCAGTTTCATTGTATCGGCTGTGGCCATGCCTCAGAAATGTTTGGTTTCGTTAAAGACGTGTTTGTGTGTTGTGCAAAGGATTGGGGTCTTGAAACCTTGATGAAAGAGCTTGATTGTGTAAGGAGGATCTTCAGGAAAAGTGAAGATTTCAAAGGAAAGGAATTGCATGTTAAAACCGATGACATGCTATTAAAGCTTCAAACTAAAATGATATCTCCTTTGGATGCCTGCAATTACATCATACAATTTTTCAACTGTGAAGACGCAGACAGCATGTCAGACTTTCCTGCTTCAGGTATTTCTTCAAAGGATTTGGCAACCTCTCAATCTAACCTTACAAAGGATACACCATCTCTTTCAAAACCTAATTCTCTATTACCAAAATATTCCTATGACATGAGCTATTCTAGGTCTCATCCTGATGCCATGTCGAGTGATATACTTCAGAAAGACATCAAGGCTTCCATCTTAAGTGAACTGAAAAATGAGGCTGATTTCCATTTGGGTGCCTTATTAAGGAAAGGTGGACTTGAAAGTTTGGAGAGCATTGTGAGGATAAAGGAGGCAGAAGCTAGAATGTTCCAAACCAAGGCAGACGAAGCAAGAAGAGAGGCAGAAGGGTTCCAGAGGATGATCAGGACAAAGACCGCGCAGATGGAGGAAGAGTACGCCGAAAAGCTTTCCAAACTCTGCTTGCATGAGACTGAGGATACGCAGAGGAAGAAATTGGATGAACTGAAAGTCTTGGAAAATTCCTATTTTGATTATTATAACATGAAGAAAAGAATGCAAGAAGAGATTGATGGTTTGTTGCGGAGAATGGAGGCAACAAAGCAGCAATGGGTTTAA 2646 0.4286 MIGSKDRVADSDGENSRSKLSRHNFEANKEYPDEKGVEFLRDSEVGGGEGVLHSKPTKIIVGGNSGLQELTFSYLCDNPKLSLAEKEIPGKSLLNSLEKMSHKGKEVVVCEDSNQDGKWVERDFLSLSEPIEDSSKRSLEEVVERESNREKKPKLETLNLSLALPDVSLSLTASNALQNGDQQPVRTKPCWPSTTHNSYSNDYTTASLSYSYSHPFSHNPSCSLTRNSTDNFEYSVSKDDQIWNCGEGTNGSVHSRFKPIGDGVGLSNHGGAGISSFMQGNSQYKTTSSDNHSFFPSELPARPRFEAQSGDSRGRNSENLRILEGLDDGKVRKLSRPERIVREIVSESIPVMALTIQELADDVISSTKEYLKNLIEKPDKKEEMVGLQNRLERRSDLTKESLSKCHKVQLEVLVAVKMGVASFLSSKVPLSEMVEIFLYKRCRNVTCKHLLPVDDCDCKICSGHKGFCSSCMCPVCLNFDCASNTCSWIGCDVCSHWCHATCGILRNLIKPGPSLKGPSGTSEMQFHCIGCGHASEMFGFVKDVFVCCAKDWGLETLMKELDCVRRIFRKSEDFKGKELHVKTDDMLLKLQTKMISPLDACNYIIQFFNCEDADSMSDFPASGISSKDLATSQSNLTKDTPSLSKPNSLLPKYSYDMSYSRSHPDAMSSDILQKDIKASILSELKNEADFHLGALLRKGGLESLESIVRIKEAEARMFQTKADEARREAEGFQRMIRTKTAQMEEEYAEKLSKLCLHETEDTQRKKLDELKVLENSYFDYYNMKKRMQEEIDGLLRRMEATKQQWV 806
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g02524 806 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 741 763 IPR004082 -
Pste3g02524 806 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 552 571 IPR004082 -
Pste3g02524 806 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 355 377 IPR004082 -
Pste3g02524 806 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 433 454 IPR004082 -
Pste3g02524 806 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 394 409 IPR004082 -
Pste3g02524 806 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 702 722 IPR004082 -
Pste3g02524 806 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 479 499 IPR004082 -
Pste3g02524 806 MobiDBLite consensus disorder prediction 1 37 - -
Pste3g02524 806 CDD PHD_OBE1_like 472 531 IPR047578 -
Pste3g02524 806 Coils Coil 708 742 - -
Pste3g02524 806 PANTHER VERNALIZATION-INSENSITIVE PROTEIN 3 101 805 IPR004082 -
Pste3g02524 806 Pfam PHD - plant homeodomain finger protein 442 566 IPR032881 -
Pste3g02524 806 Pfam Coiled-coil region of Oberon 668 795 IPR032535 -
Pste3g02524 806 Coils Coil 784 804 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g02524 Pste-Chr3 18056950 18060733 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g02524 442 539 PHD Gene Family AT5G57380 28.571 2.28e-07 52.4