Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g02506 AAAATATTGAAAGATTTGTCAGTTAGCTTGAAGGCACCCCACATGTCTCTCTTACGCAGCTTCCTAGTTCATCCTACAATTATTAATGTCTCTCATGACCCCGAATCACGTGTCTTAGGAATGCACTACTTCTCAACTGACGAGGAGGAGGAGGAGGAGGAGGAGGAGAGCAATGTCAGCGGCGACGATGAGGAGGCGGAGAATTCAAGGGGCGCGGTGGTGGAGGGGAGAGGAAAGTGGGTCCAAGAATGGAACAGGGTGTTCCTGCTGGTGAGCGCAACGGGGTTGTTCGTGGATCCTCTATTCTTCTACGCGCTCTCCATAAGCGACACGTGTATGTGCCTCTTCGTGGATGGCTGGCTCGTCATCACCGTCACTGCGCTCCGCTGCATGAACGACGCGTTGCACCTCTGGAGCATTTGGCTCCAGTTCAACATTTCCAAACGCTCTTCTTTTCTCGCCAGAGACTCACATCTTCGCTACCGGACCTTCTTCTTTGACCTCTTTGTCATTCTCCCTATTCCCCAGATTGTGCTATGGGTGGCAATTCCGTCTCTGTTGGAGAAAGGATCAATTACATTGGTGATGACAGTGTTTTTAATAATGTTCCTGTTTCAATACCTTCCCAAAATTTATCACTCCGTTCGCCTCTTGCGTCGCATGCAAAACCTCACTGGCTATATTTTTGGAACCGTTTGGTGGGGTATCGCCCTCAACCTCATCGCCTATTTTGTAGCTTCCCATGCAGCAGGGGCGTGTTGGTACTTGTTGGGAGTGCAAAGGGCAGCACAGTGCCTAGAAGAGCAATGTGCAAAAACAGCAGGTTGTAGCTTGAGAACACTATGTTGTAAACAGCCCATATACTATGGGGGCAGTAACATTGTAAGAGACAAAACAAGGTTGGCATGGGCGGAGAACAGGGAAGCAAGGTCTACTTGTTTGGACAGTTCTGATAACTATGACTATGGCTTTTATGAATGGTCTGTTCAACTCGTAACAAATGATAGCAGATTGGAAAAGATACTTTTCCCTATCTTCTGGGGCCTCATGACTCTCAGCACTTTTGGGAACCTAGAGAGCACAACGGAGCGGATAGAAGTGATTTTCAACATTATTGTGTTGACTAGTGGCCTCATTCTAGTGACTATGCTGATTGGAAACATCAAGGTGTTTTTACATGCGACAACATCGAAGAAGCAAGCCATGCAATTGAAGATGAGGGACATTGAATGGTGGATGAGAAAAAGGAGATTGCCACAAGGGTTCAGGCAGCGTGTGAGAAACTATGAGAGGCAGCGTTGGGCTGCCATGCGTGGGGTTGATGAATGCCAGATGATAAAAAATCTCCCTGAGGGACTAAGAAGGGACATCAAGTACCATCTTTGTTTGGATTTGGTGAGACAGGTGCCACTGTTTCAGCATATGGATGATTTGGTGCTAGAGAACATATGTGACCGAGTGAAGTCCCTTGTATTCACAAAGGGAGAAACAATAAGCAGAGAGGGAGACCCAGTGCAAAGAATGTTGTTTGTGGTAAGGGGTCATCTTCAAAGTAGCCAAGTACTACGAGACGGGGTGAAAAGTTTGTGCATGTTAGGCCCTGGGAACTTCAGTGGGGACGAGCTTCTTTCATGGTGTCTAAGAAGACCCTTCATAGAGAGGCTTCCACCATCTTCATTCACTTTGGTAACGCTTGAAACCACTGAGGCATTTGGGCTTGAAGCACGGGACGTGAAGTATGTGACACAACATTTTAGGTACACATTTGTTAAGGAAAAGGTAAAGAGAAGTGCAAGGTATTACTCACCGGGATGGAGAACTTGGGCTGCTGTGGCCATTCAGTTGGCTTGGAGAAGGTATAGACACCGTTTGACTTTGACATCTTTGTCCTTTATAAGGCCTCGCAGGCCTGCTTCAAGGTGCACTTCCATGGAAGAGGATAGGCTTCGTTTGTATACGGCTTTGTTAACCTCTCCCAAGCCTAATCAGGATCACTTTGACTTCTGATTTCTCATAACTCTTTTTGGATTTTGTATAACTTCAATAATGT 2050 0.4659 KILKDLSVSLKAPHMSLLRSFLVHPTIINVSHDPESRVLGMHYFSTDEEEEEEEEESNVSGDDEEAENSRGAVVEGRGKWVQEWNRVFLLVSATGLFVDPLFFYALSISDTCMCLFVDGWLVITVTALRCMNDALHLWSIWLQFNISKRSSFLARDSHLRYRTFFFDLFVILPIPQIVLWVAIPSLLEKGSITLVMTVFLIMFLFQYLPKIYHSVRLLRRMQNLTGYIFGTVWWGIALNLIAYFVASHAAGACWYLLGVQRAAQCLEEQCAKTAGCSLRTLCCKQPIYYGGSNIVRDKTRLAWAENREARSTCLDSSDNYDYGFYEWSVQLVTNDSRLEKILFPIFWGLMTLSTFGNLESTTERIEVIFNIIVLTSGLILVTMLIGNIKVFLHATTSKKQAMQLKMRDIEWWMRKRRLPQGFRQRVRNYERQRWAAMRGVDECQMIKNLPEGLRRDIKYHLCLDLVRQVPLFQHMDDLVLENICDRVKSLVFTKGETISREGDPVQRMLFVVRGHLQSSQVLRDGVKSLCMLGPGNFSGDELLSWCLRRPFIERLPPSSFTLVTLETTEAFGLEARDVKYVTQHFRYTFVKEKVKRSARYYSPGWRTWAAVAIQLAWRRYRHRLTLTSLSFIRPRRPASRCTSMEEDRLRLYTALLTSPKPNQDHFDF 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g02506 668 SUPERFAMILY Voltage-gated potassium channels 76 392 - -
Pste3g02506 668 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 60 633 - -
Pste3g02506 668 CDD CAP_ED 471 577 IPR000595 -
Pste3g02506 668 FunFam Cyclic nucleotide-gated ion channel 1 398 462 - -
Pste3g02506 668 FunFam cyclic nucleotide-gated ion channel 4 469 587 - -
Pste3g02506 668 MobiDBLite consensus disorder prediction 46 62 - -
Pste3g02506 668 SMART cnmp_10 471 600 IPR000595 -
Pste3g02506 668 Pfam Ion transport protein 84 388 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Pste3g02506 668 Gene3D Jelly Rolls 469 587 IPR014710 -
Pste3g02506 668 Gene3D Helix hairpin bin 396 462 - -
Pste3g02506 668 SUPERFAMILY cAMP-binding domain-like 397 585 IPR018490 -
Pste3g02506 668 ProSiteProfiles cAMP/cGMP binding motif profile. 471 550 IPR000595 -
Pste3g02506 668 Pfam Cyclic nucleotide-binding domain 491 579 IPR000595 -
Pste3g02506 668 MobiDBLite consensus disorder prediction 46 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g02506 Pste-Chr3 17848698 17858952 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g02506 71 667 Ion Channels AT5G54250 77.273 0.0 994