Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g02501 TCCCCACCACCAACTCACACTAGTGCCTTCCTAACCACAAATCTCTCTCTCTCTCTTTCCCTACATATGGTGTTACACTCTTGTACACATTTCTCTGTACCAATTGTTATCTTCAATTTTCCAAATAACAAAAGTTTTCAAACCTAGGAAGTTGGAAGTCATGGCATCAACATTGATGGCAGCTACAGCCAGCTCTGGCACTGTTGTTAAACCAACTCCTTTCCTTGGACAAGGCAAGGGTGCCAATGCCAACCCTCTTAGGGATGTTGTCTCCATGGGAACTGGGAAATATACCATGGGCAATGAATTGTGGTATGGACCCGACAGAGTGAAATACTTGGGACCCTTTTCAGCTCAGACCCCTTCATACTTGAAAGGAGAATTCCCAGGAGATTATGGATGGGACACTGCTGGTTTATCTGCTGACCCAGAAGCATTTGCCAAGAACAGGGCTCTTGAGGTGATCCATGGGCGTTGGGCCATGCTTGGAGCACTAGGTTGCATCACCCCAGAGGTGCTACAGAAGTGGTTGAGAGTGGAATTCAAGGAGCCAGTGTGGTTCAAAGCTGGATCCCAAATATTCTCAGAAGGTGGGCTTGACTATCTGGGTAACCCAAACCTTGTGCATGCACAAAGCATCCTAGCAGTGCTGGGCTTCCAAGTTGTTCTTATGGGCCTTGTTGAAGGGTACCGCATAAATGGGCTTGATGGGGTGGGAGAGGGCAACAACCTCTACCCTGGGGGCCAGTACTTTGACCCACTGGGCCTTGCTGATGACCCTGTCACTTTTGCTGAGCTCAAAGTGAAGGAGATCAAGAATGGAAGGTTGGCCATGTTCTCTATGTTTGGTTTCTTTGTTCAAGCCATTGTCACTGGAAAAGGCCCATTGGAGAATCTTTTGGACCACCTTGACAACCCTGTGGCTAACAATGCTTGGGTCTATGCCACTAAGTTTACCCCTGGATCTTAAATGTATATGACTTCCCTAATCTCTATCCATCCCTTGTGCTTGCCTTTCTGATTTATGTGTAGATTATTATCATAATGATTCTCGCGGATTAGTGTACTTATTAAGGACTAAGGTTCAATTTAAACCTGGGATATCCCTTGTTTGCTAATCTAGTTTGGTCTGAAGCAACTAATGAGGAAGGTACTGATTCTGGGATTCAATGTTGAGAAT 1180 0.4576 MASTLMAATASSGTVVKPTPFLGQGKGANANPLRDVVSMGTGKYTMGNELWYGPDRVKYLGPFSAQTPSYLKGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCITPEVLQKWLRVEFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGYRINGLDGVGEGNNLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFTPGS 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g02501 269 Pfam Chlorophyll A-B binding protein 68 235 IPR022796 -
Pste3g02501 269 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 12 268 IPR001344 GO:0009765|GO:0016020
Pste3g02501 269 SUPERFAMILY Chlorophyll a-b binding protein 50 266 - -
Pste3g02501 269 FunFam Chlorophyll a-b binding protein, chloroplastic 58 262 - -
Pste3g02501 269 Gene3D Chlorophyll a/b binding protein domain 58 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g02501 Pste-Chr3 17797037 17798919 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g02501 1 268 Chloroplast and Mitochondria Gene Families AT3G27690 66.187 8.14e-121 345