Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g02486 CCATTTTCTTCCAAGCCATGTTCTATGGTTTTTCTTCAACCCTTTTAGACTTGAAAATATTATTTATTCATATCATTTTATATACGATAGACCATTTTTAAAGAGTTGTAAACCTCAATTCCCAAACTTCCATTGTGTTATTATTTATTTTGTCTATATCACTCCACCTTTGGTTTCTATGATTCTCAATTTTGAAAACTACACCACAGAATCTTCAAATAACAGCTGGTTCTATGTGAGTTTCAACTTTGAAGTTTGAAGTTTCCTGAACACTTTTTTATTTTGATTTTTATTTTTATTTTCTTTGTGGGGTCCACTTTTTCCACTGTAATTGACAGCCTAATCAACAGCCTGGAAAAGGTGTTTGCATTACGGCCACGCTAAAAAGCTAAACTTGATGGGATTTCAGTAATGGGGTTCACGTAATCTAAATTGGGTCTCATTTTGTTTCAGTCTTTGAGCAGCGTTAATCACTTTTACAGAAACAGGCTATTCACGACCAAAATGAATCCTGGTATTATGTCAGTTGCTTGTAACGGAAATGCCAGGTTCTGTGCACTGAGTTTGATAGATCCAAGGTTGTTGCAGACTTGGAGAACTACAATGGTGAAGATGAAACTTGTAAAGTGGGTTTCGTTTGTTTTGGTAGTTTATTTGTTTTTGGTGAATGGTTCATTTGCCACATTCACTCCCCATGATAATTATCTAATTGCTTGTGGTTCCTCCCAAAGCATCACTTTCCAAGATCGAACATTCGTTCCTGATTCACAGCATTCTTCAGTTGTGTTGAAAACTGGGAATTCTGCTGTTGCTAGTTCCAATTCTAGTGTCCCTTCCCCGATATACCAATCAGCTAGGATTTTCACCGAGAAGGCTTCTTATAAATTTGAGGTTGAGGAAGGTAGGCACTGGCTTAGGCTATATTTTTCTCCACTTCCCAACTCTGCCCATAATTTGACTGCTGCGGCTATAACAGTCGTCACTGATGATTTTGTTCTCTTGAGTAACTTCACCTTTAGGAACTACAGTGGCTCTTATATGTTTAGGGAGTATGCCATCAATGTTACCTCTGATACCTTAACTGTCACCTTCATTCCTTCAAATGGTTCAGTAGCCTTTGTTAATGCAATTGAAGTTTTGTCAATGCCAAATGACTTGTTTGTTGATCAGGCCTTGGCCCTTAACCCAACTGCACCATTCAATGGCCTTTCTGAACTTGCTTTTGAGACTGTTTATCGCTTAAACATAGGAGGCCCCTTGCTCACTCCCCAAAATGACACCTTGGGAAGGACTTGGGAGAATGATAGGAAATATCTCCATGTGAATAGTTCAGTCATTAATGTGTTAGTTAATCCTTCCAGTATTAAGTATCCAGCAGGTGTTACACCTGAGACGGCACCAAATTGGGTCTATGCCACTTCCGAAGCAATGGGGGATGCAAATGTGCCCAACTCAAATTTCAACATTACTTGGGTCTTTACTGTGGATCCAAACTTCTCCTACTTTATCCGGGTGCACTTTTGTGATATTATTAGCAAGTCTCTCAACACTTTGGTGTTCAATTTGTTCATAAATTCTGACATAGCTCTTGGAAGCCTGGACCTCTCATCCATAACTAACGATTTATCTGTGCCTTACTATAAGGACTTTGTTTCCAATGCCTCGGAAGATTCCAACATTTTGACGGTAAGTGTTGGTCCTGATACCATGGCAGATATCACAAATGCCACTATGAATGGACTGGAAGTTATCAAGATCAGCAATGCATTTAAGAGCTTGGATGGACTTTCTTCAGTTGAGAGTCTTCTTCCTAGTTCGCCTTCAAGGAAAAGCAAGACGGGAATAATAGTTGGTTCTTCTGTTGGGGCTGTGGCTGCCATAGCTTTGGTTGGCTTGTGTTATTGCTTCTTGGTGAGAAGCAAATCAAAGTCTACTCAGCAAGGCCATTCTTGGCTTCCTTTACCTTTATATGGAAATTCTCAGACCATGACAAAAATGTCAACAACTTCACAGAAGAGTGCAACTGCAAGCTGCATTTCTTTAGCTTCATCGAATCTCGGACGGTTCTTCACTTTCCAAGAGATCCTAGATGCAACTAACAAGTTTGATGAGAAGCTGCTTCTTGGTGTCGGTGGGTTTGGCAGGGTTTATAAAGGAACTCTTGAAGATGGGACTAATGTGGCTGTTAAAAGAGGGAACCCCAGATCTGAACAAGGTCTTGCTGAATTCCGAACAGAAATTGAGATGTTATCCAAGCTTCGCCATCGCCATCTTGTGTCCCTCATTGGCTATTGTGATGAGAGATCCGAAATGATCCTTGTCTATGAATACATGGCCAATGGACCTCTCAGGAGTCATCTGTATGGAACTGACCTACCACCTCTATCATGGAAGCAGCGACTTGAAATTTGCATTGGAGCAGCAAGAGGTCTTCATTATCTCCACACTGGTGCATCTCAAAGCATAATTCACCGGGATGTAAAGACAACTAACATCCTCTTAGATGATAACTTTGTTGCTAAGGTTGCTGACTTTGGCCTCTCCAAAACTGGTCCAGCTCTTGATCAGACTCATGTCAGCACTGCTGTGAAAGGCAGTTTTGGTTATCTTGATCCTGAATACTTCAGAAGGCAACAGCTTACAGAGAAATCAGATGTTTATTCATTTGGAGTGGTTTTAATGGAAGTTTTGTGCACAAGACCAGCCTTGAATCCTGTCCTTCCTAGGGAGCAGGTTAACATAGCTGAGTGGGCAATGAACTGGCAGAAGAAAGGAATGCTTGATCAAATAATGGATCAAAATCTGGTGGGGAAAGTCAATCCTGCTTCTCTTAAGAAGTTTGGGGAGACTGCTGAGAAGTGCTTGGCTGACTATGGAGTGGATCGGCCGTCCATGGGAGATGTCTTGTGGAATCTTGAATATGCTTTGCAGCTTCAAGAGACCTCATCAGCACTCATGGAACCTGAAGATAACAGCACAAACCACATTCCTGGAATTCAGTTGACACGTCTTGAGCCTTTTGATAACAGTGTTAGTATGATTGATGGGGACAACTCTTTCACAGAGAATGATGCAGAAGATGCTGCCACAAGTGCAGTGTTCTCACAATTGGTAAATCCTCGAGGAAGATGA 3132 0.4109 MNPGIMSVACNGNARFCALSLIDPRLLQTWRTTMVKMKLVKWVSFVLVVYLFLVNGSFATFTPHDNYLIACGSSQSITFQDRTFVPDSQHSSVVLKTGNSAVASSNSSVPSPIYQSARIFTEKASYKFEVEEGRHWLRLYFSPLPNSAHNLTAAAITVVTDDFVLLSNFTFRNYSGSYMFREYAINVTSDTLTVTFIPSNGSVAFVNAIEVLSMPNDLFVDQALALNPTAPFNGLSELAFETVYRLNIGGPLLTPQNDTLGRTWENDRKYLHVNSSVINVLVNPSSIKYPAGVTPETAPNWVYATSEAMGDANVPNSNFNITWVFTVDPNFSYFIRVHFCDIISKSLNTLVFNLFINSDIALGSLDLSSITNDLSVPYYKDFVSNASEDSNILTVSVGPDTMADITNATMNGLEVIKISNAFKSLDGLSSVESLLPSSPSRKSKTGIIVGSSVGAVAAIALVGLCYCFLVRSKSKSTQQGHSWLPLPLYGNSQTMTKMSTTSQKSATASCISLASSNLGRFFTFQEILDATNKFDEKLLLGVGGFGRVYKGTLEDGTNVAVKRGNPRSEQGLAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGASQSIIHRDVKTTNILLDDNFVAKVADFGLSKTGPALDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMNWQKKGMLDQIMDQNLVGKVNPASLKKFGETAEKCLADYGVDRPSMGDVLWNLEYALQLQETSSALMEPEDNSTNHIPGIQLTRLEPFDNSVSMIDGDNSFTENDAEDAATSAVFSQLVNPRGR 875
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g02486 875 FunFam Putative receptor-like protein kinase 66 215 - -
Pste3g02486 875 Gene3D Transferase(Phosphotransferase) domain 1 610 827 - -
Pste3g02486 875 FunFam Receptor-like protein kinase FERONIA 610 826 - -
Pste3g02486 875 Gene3D Phosphorylase Kinase; domain 1 492 609 - -
Pste3g02486 875 Pfam Malectin-like domain 69 417 IPR024788 -
Pste3g02486 875 Pfam Protein tyrosine and serine/threonine kinase 539 800 IPR001245 GO:0004672|GO:0006468
Pste3g02486 875 FunFam receptor-like protein kinase FERONIA 495 609 - -
Pste3g02486 875 CDD STKc_IRAK 540 805 - -
Pste3g02486 875 PANTHER OS07G0166700 PROTEIN 520 811 IPR045272 GO:0004714|GO:0006468
Pste3g02486 875 SMART serkin_6 534 807 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g02486 875 SUPERFAMILY Protein kinase-like (PK-like) 512 805 IPR011009 -
Pste3g02486 875 FunFam Receptor-like protein kinase FERONIA 239 420 - -
Pste3g02486 875 ProSitePatterns Protein kinases ATP-binding region signature. 540 562 IPR017441 GO:0005524
Pste3g02486 875 ProSiteProfiles Protein kinase domain profile. 534 807 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g02486 875 Gene3D - 66 215 - -
Pste3g02486 875 Gene3D - 238 420 - -
Pste3g02486 875 ProSitePatterns Serine/Threonine protein kinases active-site signature. 654 666 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g02486 Pste-Chr3 17657208 17660508 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g02486 37 875 Receptor kinase-like Gene Family AT3G46290 52.230 0.0 848
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Pste3g02486 Malectin_like 5.6e-35 CL0202