Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g02484 ATGCCTGAAATCAGAAAACAAGCAGAGGGTGTCAATATAATGCCTCTCTCTTCCCAGACCAGTGTTCTCTTCTGGCTTTGTACAAGGCCTGTTTTCTCAATGGAGAACAACCATGTTCAGCTTTTGCCTCATCTCACTCTGTCGCTTCTTATGATCACTGTTTTGTTTCCTTTGACTGAAGGTGCAGCAGTTTCCTCCATCAAGACTGATGCACAGGCTCTTCTCATGTTCAAAAGGATATTTCAGAAGGATCCAAGTGGAGTTTTGTCAGGGTGGAAGCTGAATAGGAATCCATGCAGCTGGTATGGAGTCTCTTGCACCCTTGGAAGAGTTACTCAGCTTGAAATTAGTGGCATTGATAACCTTGCTGGGACTATATCTCTTGACCCTTTGTCTTCTTTAGATATGTTGTCTGTTCTGAAATTGTCTATGAATTCATTTTCTGTAAATTCTACCTCTTTGCTTCAGCTACCATATAGCTTGACACAGCTTGATCTATCCTTTGGTCGAGTAATAGGTCCGGTCCCTGACAACCTGTTCTCCAAGTGTCCAAATCTTGTTGATGTGAATCTTTCTTACAACAACTTGACAGGCTCTATTCCTGAAAATTTCTTCCAAAACTCTGATAAATTGCAGTCCCTTGACATTTCTTTTAATAACCTGTCAGGGTCTATTTTTGACCTGAAAATGGAGTGCATTTCCTTGTTGCAACTTGATCTGTCTGGAAACCACTTGTCAGACTCAATTCCCTTCTCTTTGTCAAACTGCACCAGCCTTCAAATTTTGAATTTAGCCAACAATATGATTTCTGGGGAAATCCCCAAAGCTTTGGGTCAACTAAACAAACTACAGACTTTGGATCTTTCCCACAACCAACTCATTGGCTGGATCCCTTCTGAATTGGGAAATGCATGTGCTTCCCTTTTGGAGCTTAAACTTTCTTTCAACAACATCTCAGGCTCAATCCCATCTGGTTTGTCTTCTTGCACTTGGCTACAACTTCTTGACATATCTAACAACAATATGTCAGGCCAGTTACCGGATTCAAATTTTCAGAACCTTGGATCATTACAGGAACTGAGACTGGGAAATAATGCTATCACTGGTCAATTTCCATCTTCATTATCTTCCTGCAAGAAGTTGAAGATTGTGGATTTCAGTTCAAATAAAATTTATGGATCTATCCCCAGAGATTTATGCCCAGGGGCAGCCTCACTTGAGGAGCTGAGAATGCCAGATAATCTCATTACAGGAGAAATCCCAGCAGAACTGTCAAAGTGTTCACAGCTGAAGACACTTGATTTTAGTCTAAACTATCTTAATGGTACAATTCCCGATGAGCTCGGACAACTTGAAAACCTTGAGCAGCTAATAGCATGGTTCAATGGCTTGGAAGGAAGAATTCCACCGAAGTTGGGCCAGTGTAAGAATCTTAAGGATCTCATACTGAATAATAATCACCTGAGAGGTGGAATTCCCATTGAGTTGTTCAATTGCAGCAATCTTGAATGGATATCACTGACAAGCAATGAACTCAGTGGTGAAATACCGCGCGAGTTCGGCCTCTTGACAAGGTTAGCAGTTCTGCAGCTTGGAAACAACAGCTTGACTGGGGAGATACCATCAGAGCTAGCAAATTGCAGCAGTTTGGTGTGGTTGGACTTGAACAGCAACAAGCTCACAGGCGAGATCCCTCCAAGACTTGGCAGGCAATTAGGAGCGAAATCCTGGTTTGGGATCCTTTCAGAAAACACTTTGGTGTTTGTAAGAAATGTTGGAAACTCATGCAAAGGGGTTGGAGGTTTGCTAGAATTCTCTGGCATTCGACCTGAAAGACTCTTGCAGGTTCCAACATTGAGAACTTGTGATTTCACAAGACTCTATTCTGGTCCTGTCCTCAGTCTGTTCACCAAGTACCAGACTCTGGAGTATCTTGATCTTTCCTATAACGAGCTTCGGGGGAAAATCCCAGATGAATTTGGAGATATGGTGGCTCTGCAGGTTCTTGAACTATCTCACAATCAGCTATCAGGAGAAATCCCTACATCACTTGGCCAGCTAAAAAATCTGGGTGTGTTTGATGCATCACACAATAGACTGCAGGGTCATATCCCAGACTCATTCTCAAACCTCTCCTTCTTAGTGCAACTTGATCTATCTAACAATGAGTTAACAGGGCAAATTCCATCTAGGGGACAACTAAGTACACTTCCAGCTTCCCAGTATGCAAATAATCCTGGCCTTTGTGGTGTACCATTGCCTGATTGCAAGAATGACAACACCCAACCTACAACAAATCAAAGTGATGATGTTAGTAAAGGGAGCCATAAAGCAGCAACTGCAACATGGGCAAACAGCATTGTCATGGGAATTCTTATCTCTGTCGCTTCTGTATGTATCCTAATTGTGTGGGCAATTGCGATGCGGGCAAGGAGGAAGGAGGCTGAGGAAGTCAAGATGCTTAATAGCCTGCAAGCATGCCATGCTGCTACCACTTGGAAAATAGACAAAGAGAAAGAGCCACTGAGCATTAATGTGGCAACATTTCAGAGGCAGCTGAGGAAGCTAAAGTTTTCACAGCTGATTGAAGCAACTAACGGCTTCTCAGCAGCAAGCCTTATAGGGTGTGGTGGTTTTGGTGAAGTGTTCAAGGCCACACTCAAAGATGGCTCAAGTGTTGCCATTAAGAAGCTCATTCGACTGAGTTGCCAGGGTGATCGAGAATTCATGGCAGAGATGGAAACGTTAGGGAAGATCAAGCACAGAAATCTTGTCCCTTTGTTAGGGTACTGCAAAGTAGGTGAAGAGAGGCTCCTTGTTTATGAGTACATGGAGTATGGAAGCCTAGAAGAGATGCTTCATGGGAGAATCAAGACGAGTGATCGGCGCATTTTAACATGGGAAGAAAGGAAGAAGATTGCAAGAGGTGCTGCTAAAGGACTTTGTTTCCTGCACCACAATTGCATTCCTCACATCATACACAGAGACATGAAATCAAGCAATGTGCTACTTGACCATGAAATGGAGTCCAGGGTCTCAGATTTTGGAATGGCAAGACTAATAAGTGCCCTTGACACACATCTTAGTGTGAGCACTCTAGCAGGAACACCTGGATATGTTCCCCCAGAGTACTACCAAAGTTTCAGGTGCACTGCCAAGGGAGATGTGTACTCATTTGGAGTTGTGATGTTGGAACTGCTAAGTGGAAAACGCCCTACTGACAAGGAGGACTTTGGTGACACCAACTTGGTGGGGTGGGCCAAGATGAAGGTCCATGAAGGGAAGCAAATGGAAGTAATTGACAATAACTTGCTTTTGGCCACTCAAGGAACTGATGATGAAGCAGAAGCCAAAGAAGTGAAGGAGATGATAAGATATCTAGAGATTACTTTGCGGTGTGTTGATGACTTGCCTTCAAGAAGGCCAAACATGTTGCAGGTAGTGGCCATGCTGAGAGAGCTTATGCCTGGATCAACTGATGGAAGCAGCAACAGTGCTTGA 3501 0.435 MPEIRKQAEGVNIMPLSSQTSVLFWLCTRPVFSMENNHVQLLPHLTLSLLMITVLFPLTEGAAVSSIKTDAQALLMFKRIFQKDPSGVLSGWKLNRNPCSWYGVSCTLGRVTQLEISGIDNLAGTISLDPLSSLDMLSVLKLSMNSFSVNSTSLLQLPYSLTQLDLSFGRVIGPVPDNLFSKCPNLVDVNLSYNNLTGSIPENFFQNSDKLQSLDISFNNLSGSIFDLKMECISLLQLDLSGNHLSDSIPFSLSNCTSLQILNLANNMISGEIPKALGQLNKLQTLDLSHNQLIGWIPSELGNACASLLELKLSFNNISGSIPSGLSSCTWLQLLDISNNNMSGQLPDSNFQNLGSLQELRLGNNAITGQFPSSLSSCKKLKIVDFSSNKIYGSIPRDLCPGAASLEELRMPDNLITGEIPAELSKCSQLKTLDFSLNYLNGTIPDELGQLENLEQLIAWFNGLEGRIPPKLGQCKNLKDLILNNNHLRGGIPIELFNCSNLEWISLTSNELSGEIPREFGLLTRLAVLQLGNNSLTGEIPSELANCSSLVWLDLNSNKLTGEIPPRLGRQLGAKSWFGILSENTLVFVRNVGNSCKGVGGLLEFSGIRPERLLQVPTLRTCDFTRLYSGPVLSLFTKYQTLEYLDLSYNELRGKIPDEFGDMVALQVLELSHNQLSGEIPTSLGQLKNLGVFDASHNRLQGHIPDSFSNLSFLVQLDLSNNELTGQIPSRGQLSTLPASQYANNPGLCGVPLPDCKNDNTQPTTNQSDDVSKGSHKAATATWANSIVMGILISVASVCILIVWAIAMRARRKEAEEVKMLNSLQACHAATTWKIDKEKEPLSINVATFQRQLRKLKFSQLIEATNGFSAASLIGCGGFGEVFKATLKDGSSVAIKKLIRLSCQGDREFMAEMETLGKIKHRNLVPLLGYCKVGEERLLVYEYMEYGSLEEMLHGRIKTSDRRILTWEERKKIARGAAKGLCFLHHNCIPHIIHRDMKSSNVLLDHEMESRVSDFGMARLISALDTHLSVSTLAGTPGYVPPEYYQSFRCTAKGDVYSFGVVMLELLSGKRPTDKEDFGDTNLVGWAKMKVHEGKQMEVIDNNLLLATQGTDDEAEAKEVKEMIRYLEITLRCVDDLPSRRPNMLQVVAMLRELMPGSTDGSSNSA 1166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g02484 1166 SUPERFAMILY L domain-like 305 752 - -
Pste3g02484 1166 FunFam serine/threonine-protein kinase BRI1-like 2 69 181 - -
Pste3g02484 1166 SMART serkin_6 868 1155 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g02484 1166 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 603 760 - -
Pste3g02484 1166 SMART LRR_typ_2 354 378 IPR003591 -
Pste3g02484 1166 SMART LRR_typ_2 280 304 IPR003591 -
Pste3g02484 1166 SMART LRR_typ_2 476 499 IPR003591 -
Pste3g02484 1166 SMART LRR_typ_2 548 571 IPR003591 -
Pste3g02484 1166 SMART LRR_typ_2 183 207 IPR003591 -
Pste3g02484 1166 SMART LRR_typ_2 451 475 IPR003591 -
Pste3g02484 1166 SMART LRR_typ_2 523 547 IPR003591 -
Pste3g02484 1166 SMART LRR_typ_2 305 329 IPR003591 -
Pste3g02484 1166 SMART LRR_typ_2 711 734 IPR003591 -
Pste3g02484 1166 SMART LRR_typ_2 663 687 IPR003591 -
Pste3g02484 1166 SUPERFAMILY L domain-like 87 392 - -
Pste3g02484 1166 Pfam Brassinosteroid receptor island domain 579 636 IPR045381 -
Pste3g02484 1166 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 400 587 - -
Pste3g02484 1166 ProSitePatterns Serine/Threonine protein kinases active-site signature. 992 1004 IPR008271 GO:0004672|GO:0006468
Pste3g02484 1166 Pfam Protein tyrosine and serine/threonine kinase 872 1150 IPR001245 GO:0004672|GO:0006468
Pste3g02484 1166 ProSitePatterns Protein kinases ATP-binding region signature. 874 897 IPR017441 GO:0005524
Pste3g02484 1166 PRINTS Leucine-rich repeat signature 211 224 - -
Pste3g02484 1166 PRINTS Leucine-rich repeat signature 280 293 - -
Pste3g02484 1166 Pfam Leucine rich repeat 235 293 IPR001611 GO:0005515
Pste3g02484 1166 Pfam Leucine rich repeat 160 221 IPR001611 GO:0005515
Pste3g02484 1166 Pfam Leucine rich repeat 500 560 IPR001611 GO:0005515
Pste3g02484 1166 Pfam Leucine rich repeat 635 676 IPR001611 GO:0005515
Pste3g02484 1166 Pfam Leucine rich repeat 332 391 IPR001611 GO:0005515
Pste3g02484 1166 Gene3D Ribonuclease Inhibitor 69 181 IPR032675 -
Pste3g02484 1166 Gene3D - 581 637 - -
Pste3g02484 1166 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 228 307 - -
Pste3g02484 1166 FunFam serine/threonine-protein kinase BRI1-like 2 944 1162 - -
Pste3g02484 1166 Gene3D Transferase(Phosphotransferase) domain 1 944 1163 - -
Pste3g02484 1166 Gene3D Phosphorylase Kinase; domain 1 828 943 - -
Pste3g02484 1166 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 308 395 - -
Pste3g02484 1166 Pfam Leucine rich repeat N-terminal domain 68 106 IPR013210 -
Pste3g02484 1166 SUPERFAMILY Protein kinase-like (PK-like) 849 1151 IPR011009 -
Pste3g02484 1166 Gene3D Ribonuclease Inhibitor 208 756 IPR032675 -
Pste3g02484 1166 FunFam serine/threonine-protein kinase BRI1-like 2 829 943 - -
Pste3g02484 1166 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 379 1152 - -
Pste3g02484 1166 ProSiteProfiles Protein kinase domain profile. 868 1155 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g02484 1166 CDD STKc_IRAK 874 1154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g02484 Pste-Chr3 17602971 17607028 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g02484 74 1154 Receptor kinase-like Gene Family AT1G55610 49.154 0.0 993
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Pste3g02484 PK_Tyr_Ser-Thr 3.6e-43 CL0016