Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g02466 TCGTCCCGACTAATATAGCATGTTCTTCTGTGGAAGCCATAGCCATAACATAAGCATAACCACCACTTGAAAAACCCACCTTGGAGAAAACAAAAACAAAAACCTAAGCTTTGTTCCGTCGTCACTATGGAGAGCACCGACTCATCAAGTGGTTCGCAACAACCGAACTTGCCACCTGGGTTTCGGTTCCACCCCACCGACGAGGAGCTTGTCGTTCACTACCTCAAAAAAAAGGCAGCTTCTGCTCCTCTTCCTGTAGCCATAATCGCCGAGGTTGATCTCTACAAGTTCGATCCATGGGAGCTACCCGCTAAGGCCACGTTTGGGGAGCAGGAGTGGTACTTCTTTAGTCCGAGGGACAGGAAGTATCCGAACGGTGCGAGGCCAAACAGGGCGGCCACATCTGGGTATTGGAAAGCCACAGGGACTGATAAGCCTGTGTTGACCTCTGGTGGAACCCAAAAGGTTGGGGTGAAGAAGGCTTTGGTTTTCTATGGAGGGAAGCCCCCAAGAGGGATCAAAACCAATTGGATCATGCATGAGTATAGGCTTGCTGATAACAAGCCTAACAATAGGCCTCCTGGCTGTGACTTGGGTAACAAGAAAAACTCTCTAAGGCTTGATGATTGGGTGCTGTGCCGAATCTACAAGAAGAGCAACACGCATAGGTCTCCGATGGAGCATGACAGGGAAGACTCAATGGAAAACATGATTGGAGGGATTCCTCCTTCCATCAACGTGGGCCACATGAATGCGAGGTTTCATCTTTCAAAGATGTCCACGGCCTACAACGGTGCATTGTTAGAAAATGACCACAACTTGTTGGAAGGGATGATGATAGGTAACGGAGGCATGAACACAACTACTACACCGTCTGGTGCCATGTCGTCTCAGTTGGGTGCCTCAAATTCCAAGGCAGAGCTTCCTTTTGTGCCAACCATGACTCACTCTTCAAACACTTCTAAGAGAACACTCTCATCACTCTATTGGAATGATGAGGATGTAGCAGGAACCTCTTCATCTAACAAAAGGTTCAATTTGGAAAGTGGGGATAATAACCATGGAAGTGTTGTGAGGACTGATCATGAGAATGGCACTGCTACCTCTATTGCCACTCTGCTTAATCAGCTCCCTCAAACCCCTTCATTGCACCAACAATCAATGATGGGATCAATAGGTGATGGATTACTTCGAACAACATACCAAATACCAGGAATGAATTGGTATGCTTAGAACAATTTCAGTTTTATTTATCGATGAGCAAGAAGGTATTGGATTACTATAAGAAGGATATGATGATATGATCCTCAGCTGGTGGAACCTTACACTATATACTCGATCTCTTGATGCTACCAATTATATTGTAAACATTTTAATGGGATATTGAGATTTTGATTGTTAGGAATTTGGAAGCAGTTGTTAGAATTTGATCAGTTAGATGGGCCTCATCGATCCTCTTCAACCATTGGAGGTAGCTGCAAGCAATAACAACGCGAAAGGTGAGGCAATGGATATTTTTAGTTAAACTTAAATATAGCTTTATACGTTTATATAGATATTTGCTTGTTTTATTGGTATGTAAATAAAAAATGGTGGTGTGCTCTTAATGTACAAATATTCAACAAAAGAGAAAAGAGATTTC 1642 0.4361 MESTDSSSGSQQPNLPPGFRFHPTDEELVVHYLKKKAASAPLPVAIIAEVDLYKFDPWELPAKATFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVLTSGGTQKVGVKKALVFYGGKPPRGIKTNWIMHEYRLADNKPNNRPPGCDLGNKKNSLRLDDWVLCRIYKKSNTHRSPMEHDREDSMENMIGGIPPSINVGHMNARFHLSKMSTAYNGALLENDHNLLEGMMIGNGGMNTTTTPSGAMSSQLGASNSKAELPFVPTMTHSSNTSKRTLSSLYWNDEDVAGTSSSNKRFNLESGDNNHGSVVRTDHENGTATSIATLLNQLPQTPSLHQQSMMGSIGDGLLRTTYQIPGMNWYA 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g02466 368 Pfam No apical meristem (NAM) protein 16 142 IPR003441 GO:0003677|GO:0006355
Pste3g02466 368 PANTHER NAC TRANSCRIPTION FACTOR 56 15 217 - -
Pste3g02466 368 Gene3D NAC domain 24 181 IPR036093 GO:0003677|GO:0006355
Pste3g02466 368 MobiDBLite consensus disorder prediction 1 20 - -
Pste3g02466 368 MobiDBLite consensus disorder prediction 1 17 - -
Pste3g02466 368 SUPERFAMILY NAC domain 9 176 IPR036093 GO:0003677|GO:0006355
Pste3g02466 368 FunFam NAC transcription factor 56 24 181 - -
Pste3g02466 368 ProSiteProfiles NAC domain profile. 15 176 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g02466 Pste-Chr3 17497279 17499377 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g02466 1 368 NAC Transcription Factor Family AT3G15510 54.026 2.27e-128 371
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pste3g02466 NAM 1.2e-39 No_clan