Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g02463 GAAAAAATTTTGATGGGGTAAAATTAATTTGGTTTTTAAACTTTGAAGCGTGCGTGGATTTTAATTTTAATCTCTTGTGTTTTTCTTTTAATGCTTGACTGAAGAAAGCAGTTATATCTACTTTTACTTTTACTTTTATTCAGGGCTACGTGCAATGCACCTACCGAATGCTACGACCGTATCGGAACCAGATAAGGTCGACTGTCTGGATGCTTTTTTGTTCAGGACACGTGGTGAAGTCCAAGAGGAGAGTAACTCAAGTGGGTCCCACTCTCCAGCAGTAAGACAAAGTTAACCGTACTTATCTTGCTATAAATAACGGCCCATGTCTACCGTTTTCTGAGAAAATAGAAGAAAGAAAAAGAGAAAACAAAACATTTTCGTTTTCTCAAAGGTAGCTGGAGCTTCCCCTGCTACTTGCTCATCGTCTTCTTCTTCATCACTGCTTCTGTTCGTCTTTTTGGTACTATTTCTGAGAAGAAATGGGAGTTCAAGAGAAGGACCCTCTTTCCCAATTGAGTTTGCCTCCTGGTTTTCGGTTCTTCCCCACCGACGAGGAGCTTCTCGTTCAATATCTATGTCGCAAGGTAGCTGGTCACCATTTCTCTCTGCAAATCATTGCTGAAATTGACTTGTACAAGTTCGACCCGTGGGTTCTTCCAAGCAAGGCAATTTTTGGTGAGAAAGAATGGTACTTTTTTAGCCCAAGAGACAGAAAGTACCCAAACGGGTCTCGACCCAACAGAGTAGCCGGGTCGGGTTATTGGAAAGCCACCGGAACCGACAAGATCATCACCACCGAAGGCAGAAAAGTTGGAATAAAAAAAGCCCTAGTTTTCTACGTTGGCAAAGCCCCCAAAGGCACAAAAACCAATTGGATCATGCACGAGTATCGCCTCCTCGACTCCTCCCGAAAGAACACTGGCACCAAGTTGGATGACTGGGTTCTGTGTCGAATATACAAGAAAAACTCGAGCGCACAGAAGGCGGCGCAAAACGGCGTGGTTTCGAGCGGAGAACACACTCAATACAGCAACGGTTCCTCCTCTTCATCTTCGTCCCAGCTCGAGGACGTTCTGGAATCGCTGCCAGAGATCAGCGAAAGGTGCTTCGCGGTGCCACATGTGCAACAACAACACAAAGAGAAGCTGAATGTTCAAAACATGGGTTCAGGGGGTTTGATGGATTGGGCGAACCCTTCGGTGGTTCTGAATTCGGTCTCTGATTTCGTTTCGGAGAACCAAGTCGTGCAGGACCAAACTCAGGGAATGGTGAATTATAACGCCTGCAATGACCTTTATGTCCCCACGATGTGCCACTTGGATTCGTCCTCCGTTCCGCAAAAGATGGAGGAAGAGGTTCAAAGTGGCGTCAGAAACCAACGTGTCGACATTAATTCCTGGTTTCTTCAGAATGATTTCACGCAGGGCTTTACAAACTCCATCGACACGTGTGGGTTTAAGTACCCGGTTCAGCCGGTCTGCTTCGGGTTCAGGCAATGAGCCTGCTTAATGATTATAGATAAATAATGTTCAAATCGTGTAAATAGGTGGGGATTCTTTGGGCTAACTCTTTGGGTTTTAGATTCCTTTAGAATAGGGTGGAAGGTGCAAATTTTGGTCCTCATTTTCGGCGTACAAAACGATTCAATGAATCGATCCTCGAGATAAAGCAATGCTGATGGAACCATTATTTGTTAGGACCTAGTTTTTGGCCACACATGCCTTACTCGGCCACATGAATCACGTTTTGTACTTAAAATGAACTAGAATTTCTTTTCAATCTTAGGTTTCGATAATTCCAATATTCATATCTTGTTTTTATAATTAACCAAGTCCATTGCCTCATTAATACAATATCAATCCATAATTAATTAATTAATAGTCCTAAATGCTTATTTTTGCTGTAATGAAAACTTACAAGGTGTTTAATTAATAAGCTTTATGCACGTGTACAATGAGTCCCGTGTGATCACAGTTTCTGAAAGTAGGCGCATTGCCATTATGAGAAAGAAAGTGATATTAAACTTCTCTGTTCCTAAATAATATTCCAAA 2054 0.4255 MGVQEKDPLSQLSLPPGFRFFPTDEELLVQYLCRKVAGHHFSLQIIAEIDLYKFDPWVLPSKAIFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITTEGRKVGIKKALVFYVGKAPKGTKTNWIMHEYRLLDSSRKNTGTKLDDWVLCRIYKKNSSAQKAAQNGVVSSGEHTQYSNGSSSSSSSQLEDVLESLPEISERCFAVPHVQQQHKEKLNVQNMGSGGLMDWANPSVVLNSVSDFVSENQVVQDQTQGMVNYNACNDLYVPTMCHLDSSSVPQKMEEEVQSGVRNQRVDINSWFLQNDFTQGFTNSIDTCGFKYPVQPVCFGFRQ 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g02463 339 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 13 227 - -
Pste3g02463 339 SUPERFAMILY NAC domain 10 163 IPR036093 GO:0003677|GO:0006355
Pste3g02463 339 Gene3D NAC domain 23 168 IPR036093 GO:0003677|GO:0006355
Pste3g02463 339 FunFam NAC domain-containing protein 72-like 23 167 - -
Pste3g02463 339 ProSiteProfiles NAC domain profile. 14 162 IPR003441 GO:0003677|GO:0006355
Pste3g02463 339 Pfam No apical meristem (NAM) protein 15 139 IPR003441 GO:0003677|GO:0006355
Pste3g02463 339 MobiDBLite consensus disorder prediction 168 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g02463 Pste-Chr3 17459254 17461535 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g02463 1 272 NAC Transcription Factor Family AT3G15500 63.605 4.44e-125 360
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pste3g02463 NAM 2.7e-36 No_clan