Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g02460 GTAGACATGGATCATCGTCAAGAGATAACAGACGACATAGAGTCTCACACTCAACAAATCCCTCACACATTACACAAAGGAAAACGTCAACTCATTCTTAAGTTTGATGATGTTGTGTATAAAATTAAGACAAAGAAAGGTGGACTATTTGTGAAGAACAAAGAGGTAGAAGAAAAAGTGATACTGAAGGGAGTGACAGGTGTTGTTGAACCTGGTGAAATGCTAGCCATGCTAGGTCCATCTGGGAGTGGCAAAACAACTCTGCTCACAGCATTGGGAGGCAGGCTTGGAGGGAAACTTAATGGAAGCATAACTTACAATGGTGAAGCCTTCTCAAATGCAATGAAGAGGAACACTGGCTTTGTTACCCAAGATGATGTTCTCTACCCCCACTTGACTGTGACTGAGACCCTAGTTTTCACAGCACTTCTCAGATTGCCCAACAGTGTCACAAAAGAAGAGAAAGTTCAGAAAGCAAAAGCTGTGATTGATCAACTAGGTTTAACCAAGTGTAAGGATAGCATAGTTGGAAGCCCTTACTTGAGGGGGGTCTCTGGGGGAGAGAGAAAGAGGGTTAGCATTGGACAGGAACTACTCATAAACCCAAGTTTGTTGTTTCTTGATGAACCTACCTCTGGCCTAGACTCAACCACAGCACAAAGAATTGTCTCAACCTTGTGGGATCTAGCAAGTGGCGGGAGAACTATTGTGATGACAATACACCAACCTTCAAGTAGGCTATACTACCAGTTTCATAAGGTGTTATTGCTATCAGAAGGCAACACCTTGTATTTTGGAAAGGGATCTGAAGCCATTGAATATTTTTCTAATATTGGATATGCTCCAGCATTGACCATGAACCCTGCAGACTTCCTTTTGGATCTTGCAAACGGTATATACACTGATGAACATAATGTAGATCATGACATAGATAGACCAAATTTGATTTCGTTGTGTAAGAGAAACAATGCTGCACAATTTAAGTCAGCACTTCAAGGAATCAATGACTCAGGTAAAAGCCAGAGTAGATCTAAAGAAAAGGACTCTGAAAAATGGCCCACCAGCTGGTCACAGCAATTTTTCGTGCTGTTAAGAAGAGACATCAAAGAGAGAAAGCATGAATCATTCTCTGGTTTGCGGGTTGGTCAGATCCTCGTGGTTGCTATTATTGCAGGACTACTGTGGTTTAAGTCTGATATCTCTCACTTGCAGGATCAGATTGGACTTCTATTCTTCATGGTAGGCTTTTGGGGTTTTTTCCCTCTCTTTCAAGCAATTTTCACATTTCCACAAGAGCTAATGATGCTACAGAAAGAAAGATCTTCTGGAATGTACAGGCTCTCCTCATACTTCATGTCAAGGGTGGTAGCTGACCTTCCCATGGAACTTATTCTTCCCATAATATTTATCTTCATAACTTATTGGATGGCAGGGTTGAAAGCCAATGGGATAAACTTCTTGTACACATTGCTGAGCCTCTTACTGAATGTGTTAGTCTCACAAGGCCTAGGCCTTGCCCTTGGTGCTTGTGTAATGGATCAAAAAGCGGCAACCACACTTGGGTCGGTGATCATGCTATCCTTCATGCTGGCTGGAGGATTTTATGTTCAGCATGTTCCAAAATTTATTTCATGGGTGAAGTACATTTCGATCGGCTATTACACCTACCAGCTCTTTATTGGCTCTCAATATAGCTATGGTGAAACATACCCTTGTCCCAATGGCCAGTGCCAAATTGCGGAATTTCCTTCCATAAAGCAAGCAGGTATTCATCTTCATTTGAATGACCAACTCATGGCTGCGGCAGCTCTAGTCATAATGGCAATAGGTTACAGACTTATAGCCTATATTGCACTTATGAGGATTGGAGTCAGAAAGAACTAG 1884 0.4193 VDMDHRQEITDDIESHTQQIPHTLHKGKRQLILKFDDVVYKIKTKKGGLFVKNKEVEEKVILKGVTGVVEPGEMLAMLGPSGSGKTTLLTALGGRLGGKLNGSITYNGEAFSNAMKRNTGFVTQDDVLYPHLTVTETLVFTALLRLPNSVTKEEKVQKAKAVIDQLGLTKCKDSIVGSPYLRGVSGGERKRVSIGQELLINPSLLFLDEPTSGLDSTTAQRIVSTLWDLASGGRTIVMTIHQPSSRLYYQFHKVLLLSEGNTLYFGKGSEAIEYFSNIGYAPALTMNPADFLLDLANGIYTDEHNVDHDIDRPNLISLCKRNNAAQFKSALQGINDSGKSQSRSKEKDSEKWPTSWSQQFFVLLRRDIKERKHESFSGLRVGQILVVAIIAGLLWFKSDISHLQDQIGLLFFMVGFWGFFPLFQAIFTFPQELMMLQKERSSGMYRLSSYFMSRVVADLPMELILPIIFIFITYWMAGLKANGINFLYTLLSLLLNVLVSQGLGLALGACVMDQKAATTLGSVIMLSFMLAGGFYVQHVPKFISWVKYISIGYYTYQLFIGSQYSYGETYPCPNGQCQIAEFPSIKQAGIHLHLNDQLMAAAALVIMAIGYRLIAYIALMRIGVRKN 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g02460 627 MobiDBLite consensus disorder prediction 1 21 - -
Pste3g02460 627 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 33 284 IPR003439 GO:0005524
Pste3g02460 627 Pfam ABC transporter 62 212 IPR003439 GO:0005524
Pste3g02460 627 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 56 277 IPR027417 -
Pste3g02460 627 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 23 616 - -
Pste3g02460 627 SMART AAA_5 71 259 IPR003593 GO:0016887
Pste3g02460 627 Gene3D - 51 278 IPR027417 -
Pste3g02460 627 ProSitePatterns ABC transporters family signature. 184 198 IPR017871 GO:0005524|GO:0016887
Pste3g02460 627 FunFam ABC transporter G family member 22 49 278 - -
Pste3g02460 627 Pfam ABC-2 type transporter 358 564 IPR013525 GO:0016020|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g02460 Pste-Chr3 17430706 17433551 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g02460 61 298 Calmodulin-binding Proteins AT2G36910 28.279 1.11e-13 72.8