Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g02458 GTTTTGGTTTTTGGTTGCTTTGAATCGCTCAGAGCAGGGAAAAGGAGCACTTGTTGTATAGTCTGTACAAAACTTGAACGCTCCCTATTGAAGGTGGAGGAATTACAAGGAAGAGGGAGAGGAATGATTGCATCTCAGCCCCTTAAAGCTGGTCAAATTGTCCTCAGAGACTCTCCCATCCTGCTGTATTCAGCTTTACCCTTGATCAGACAGTCTTTGTCGTTCTCATCCTTGTCCTCATCTGCATCAGCTTCTTATTTCTGTGATCACTGCTTCAGAACCCTGCCTCCATCTTTACAGGGAGATTCTTCAGCATCCACAGTTTTGTGCCCTAATTGTCGCCACCATTGTTTCTGCAGCTCAAGTTGTCTTTCTAAGGCACTGAACTCCTCCCATTCTTCTTGGGTATGCCAAGCGTTATCTCGTCTCAGAGCCAACTCTCTAATGGTTGAACAGCCCCTTGAGCGCCAAGTCCAAGCTAATTTTCTCATTTCTGCTTACAATCTTGCCAATATCTCCCCTTCAGACTTTCAAATTATGCTTTCTCTTCAGGGTTCTCCTGATGATTCCACCATTGCTGCAGCTCAGTTCCTACATCCTCTTATTTCATCCCTCTGCTCACTTGCTCTCATTAGCCCCCAGAATGAATTTTCTTTAGAACTGGCTTCTGCGCTTCTTGCCAAAGACAAACTCAATGCCTTTGGCATAATGCACCCCTTCTCTGTAGATGATGGCCAGAGGTCTGTCAGAGCTTATGGTATTTACCCCTATGCCTCCTTTTTTAACCATGATTGCCTTCCCAATGCCTGCAGATTTGATTATGTTGACGCTAATCCACCTGATGATGGCCATAATACTGACTTTATTATTAGGATGATTCATGATGTTCCCCAAGGTAGGGAGATCTGTTTGAGTTATTTCCCTGTGAATGAAAACTATTCTAGTAGACAGAAGAGATTGATTGAAGACTATGGCTTCACCTGTAATTGTGATCGATGTAATGTGGAGTCAAGTTGGTCAGATAATGATAGTGTTGAAGATAATGCTGAGGATGAAGAGGAGGTTATGGATGAGGACCAATATGAAACTATGGCAGCATCAGACACTGACAATCACCTCCATGAAGATAATAATGATTTTCCACATGCTTATTTCTTTTTAAAATACATGTGTGATAGAACAAATTGCTGGGGAACTTTAGCTCCTTTACCTCCACAGGGTGATACTCCGTCTAATGTCTTGGAATGTAATGTCTGTGGCAAATTGAAGAGTGATGATACTTTTGGTATTGTTGCTTGTTGCATGAAGGAGGGAATTGTTGGTAGATTTTACCCGATTTACAGTCTACTAGCCGAGACCAATGCTAGCTACCCAGGAATCAAATGTGACTTTTATGTTTTGATTTTTAAGAGTACAATAGAATATCCTATGCCCAGTTTGCCGTAATTTGTTGCTTTATTCAAAATTATTTGCCGGCAAAATATTAGCATCTCAGTTTTTGAAATATACTTTTTATAAGTTCTTTGCACGACCTAAGTGGTAGCCTGCTAGGCAGT 1556 0.4152 VLVFGCFESLRAGKRSTCCIVCTKLERSLLKVEELQGRGRGMIASQPLKAGQIVLRDSPILLYSALPLIRQSLSFSSLSSSASASYFCDHCFRTLPPSLQGDSSASTVLCPNCRHHCFCSSSCLSKALNSSHSSWVCQALSRLRANSLMVEQPLERQVQANFLISAYNLANISPSDFQIMLSLQGSPDDSTIAAAQFLHPLISSLCSLALISPQNEFSLELASALLAKDKLNAFGIMHPFSVDDGQRSVRAYGIYPYASFFNHDCLPNACRFDYVDANPPDDGHNTDFIIRMIHDVPQGREICLSYFPVNENYSSRQKRLIEDYGFTCNCDRCNVESSWSDNDSVEDNAEDEEEVMDEDQYETMAASDTDNHLHEDNNDFPHAYFFLKYMCDRTNCWGTLAPLPPQGDTPSNVLECNVCGKLKSDDTFGIVACCMKEGIVGRFYPIYSLLAETNASYPGIKCDFYVLIFKSTIEYPMPSLP 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g02458 481 ProSiteProfiles SET domain profile. 23 307 IPR001214 GO:0005515
Pste3g02458 481 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ASHR2 24 428 IPR044238 -
Pste3g02458 481 Gene3D SET domain 41 333 IPR046341 -
Pste3g02458 481 SMART set_7 27 313 IPR001214 GO:0005515
Pste3g02458 481 Gene3D - 151 233 - -
Pste3g02458 481 CDD SET_SMYD 231 333 - -
Pste3g02458 481 Pfam SET domain 39 306 IPR001214 GO:0005515
Pste3g02458 481 Gene3D - 87 146 - -
Pste3g02458 481 SUPERFAMILY SET domain 29 331 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g02458 Pste-Chr3 17404004 17407550 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Pste3g02458 SET 1.5e-11 No_clan