Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g02447 CAAACATCCTAAACAAGCACCTTACTCTCTTTGTTGTCTTTAAAGATCACCAACATATTGTAACAGACACTTTTCACCATGGTTTTTCCAAAACCTGCTTCTGAGTCTGACCTCTTTCTTCATTCCAACTTCGCTTCTCGCTATGCCAGGGACTCTCTTCCCAGATTCTGCATGCCCCAGGACTCCATGCCTAAGGAGTCTGCGTACCAAAACATTCACGATGAGTTGCAGCTTGATGCCATTCCAAAGCTCAACTTGGCTTCCTTTGTCACCACTTCCATGGAGGAAGAGTGCAACAAACTCATCATGGAATCCATCAACAAAAACTATGTTGACATGGACGAGTATCCCATCACCACTGACCTTCACAATCGATGTGTGAACATGATAGCTCGTATGTTCCATGCTGAAATTGGAGAGAATGAGAATGCAATTGGAGCAGGAACTGTGGGATCATCAGAGGCCATAATGCTGGCAGGGCTTGCATTCAAGAAGAAGTGGCAGAACAAGCGAAAGGCAGAGGGAAAGCCCTATGATAAGCCCAATTTGGTGACTGGTTCCAATGTGCAGGTATGTTGGGAGAAATTTGCAAGGTATTTTGAGGTGGAGTTGAGGGAAGTTGAGGTGAGAGAAGGCTACTACGTCATGGACCCCGCCAAAGCCGTTGAGATGGTTGATGACAACACTATTTGTGTGGCTGCAATCTTGGGTTCAACCTACAATGGAGAGTTCGAAGATGTCAAGCTCTTAAACGACTTGCTACTAGAGAAAAACAAGCAAACTGGATGGGACACACCTATTCATGTGGATGCTGCTAGTGGTGGCTTCATTGCCCCTTTCCTTTATCCAGAGCTAGAATGGGATTTCAGACTCCCATTAGTGAAGAGCATAAATGTTAGTGGACACAAATATGGGCTTGTTTATGCTGGTATTGGTTGGGTTATTTGGAGGACCAAGGACGATTTGCCAGAAGACCTTGTCTTCCATATTAATTACCTTGGAGCTGATCAACCCACCTTCACCCTCAATTTCTCTAAAGGTTCTAGTCAGATCATTGCTCAATATTATCAGCTAATTCGTCTTGGCCAAGAGGGGTACCGGAGCATAATGGAGAACTGCAGAGAAAATGCAATGGTGCTGAAGGAAGATTTGGAGAAAAGTGGACGCTTTAACATACTCTCAAAAGACGATGGTGTTCCTGTGGTGGCATTTTCTCTGAAAGACAGAAGTGAGTACGATGAGTTCAAGATATCAGAGATGTTGAGGCGGCACGGATGGATAGTGCCAGCATATCCAATGCCACCAGCAGCACAACACATAAATGTGCTTCGTGTAGTGATCAGGGCAGAGTTTTCACGCACTCTTGCAGAACGTCTTGTGTTTGACATACACAGTGTGTTGGATGAACTTGATAAAATACATCCCCCCAAAGTTACCAAAATCACTGCGGAAGAGAATGAGGCCACGGTTGATAGTGGTTTCAAGAACACTCTCACTGCATTGGATTTAAGAAGAGAAATCATTTCTCAAGAATCCAACAAGCGTCAGAAAATCACGGTTGCCTAACTACGGAACATTATCTCACTATACTAATTAAATAAGGAGCCTTCACTAGTTATTTGTTCTAACTCCATCCAAAATCCACACTGGACTATAGTTACTTTATTTTTTCCGAAAACTTTGGCCAAATCATTTTGCTTAATCCACAGTTTGTTCTTTTTCCTAT 1726 0.434 MVFPKPASESDLFLHSNFASRYARDSLPRFCMPQDSMPKESAYQNIHDELQLDAIPKLNLASFVTTSMEEECNKLIMESINKNYVDMDEYPITTDLHNRCVNMIARMFHAEIGENENAIGAGTVGSSEAIMLAGLAFKKKWQNKRKAEGKPYDKPNLVTGSNVQVCWEKFARYFEVELREVEVREGYYVMDPAKAVEMVDDNTICVAAILGSTYNGEFEDVKLLNDLLLEKNKQTGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRTKDDLPEDLVFHINYLGADQPTFTLNFSKGSSQIIAQYYQLIRLGQEGYRSIMENCRENAMVLKEDLEKSGRFNILSKDDGVPVVAFSLKDRSEYDEFKISEMLRRHGWIVPAYPMPPAAQHINVLRVVIRAEFSRTLAERLVFDIHSVLDELDKIHPPKVTKITAEENEATVDSGFKNTLTALDLRREIISQESNKRQKITVA 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g02447 495 CDD DOPA_deC_like 59 437 - -
Pste3g02447 495 PANTHER GLUTAMATE DECARBOXYLASE 2 487 IPR010107 GO:0004351|GO:0006536|GO:0030170
Pste3g02447 495 Gene3D - 66 360 IPR015421 GO:0003824
Pste3g02447 495 FunFam Glutamate decarboxylase 4 65 - -
Pste3g02447 495 NCBIfam glutamate decarboxylase 16 444 IPR010107 GO:0004351|GO:0006536|GO:0030170
Pste3g02447 495 Gene3D - 1 65 - -
Pste3g02447 495 FunFam Glutamate decarboxylase 361 448 - -
Pste3g02447 495 FunFam Glutamate decarboxylase 66 360 - -
Pste3g02447 495 SUPERFAMILY PLP-dependent transferases 16 444 IPR015424 -
Pste3g02447 495 Gene3D - 361 447 - -
Pste3g02447 495 Pfam Pyridoxal-dependent decarboxylase conserved domain 33 381 IPR002129 GO:0016830|GO:0019752|GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g02447 Pste-Chr3 17301495 17303900 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g02447 1 483 Calmodulin-binding Proteins AT5G17330 75.309 0.0 767