Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g02442 CTCGAACACACTCTCTCTCTTTTTTTTCTCTCTCTAAGCTCTGACCCCAATTTCTGTGGCGGCTCTCTCTCTACTGAGATTGAGATTTGGATCCATCCATCCTCTTTGATCTATTCATTGGGTTGGGTTGAGGTATTCAACTTCAACTTCAACAACACCAACTCCAGCTATGGTTACCCAACAGCCACAGCCACAGCTTCAGGTTCAGGTTCAGGTTCAGCCTCAGCCTCTGCCTCAGCCTCAACAGCCTACACCCTCTTCACAAGATGACGCCTTGAAGAGGAACACCGATTGTGTCTACTTCCTTGCATCTCCTTTGACATGCAAAAAGGGGAATGAATGTGAGTACCGTCATAGTGAGTATGCACGTGTTAATCCTAGGGATTGTCGTTATTGGTTGAGTGGCAATTGCTTGAATCCCAAATGTTCATTTCGTCATCCGCCTCTTGATGGATTGTTAGGAACACAGGTAGCAACAACTGGTGGACCATCTGTAGCCCCATCACAGATTCCAACAGCATCTGCAACACATGCACCTTATAATTCCAGTAAACAAGCTGTCCCATGCTTTTTCTTCCAAAAGGGGCTTTGCTTAAAAGGTGACAGATGTGCCTTCTTGCATGGTCCTCCTCCTCCTAACACTGTTAATAAAGTAGCTGCTCAGGTTCCAGTGACTAGCCAAGGAGCTGAGAATACAAGTTTGAAGAAGCCTTTTGGCAGCAATGACAAGTCTACTCAGGAAAGGAAAACCTTCCAAGGAAATTTTGCGAAGTCAGGTGGAGGGCTTGAAGCCAAACCTGCCCCAAAAATTGAAACTGCTCTGCAAAGAAATATATTTGATTCAGAGAAGAAAATGCCTCCACCATCTGCGGGATTTGATAATGAGACTTCTAGATTTAAGACAAGTTCTCCACCAGTGACCAATGGCCCTGCTATAGCACGGTCGAACCGTCTGCATCAAGCTCGTGTGCCTGATGATCACAGTTTCCCCTGTGGCAAGGACAGTGACGAGTTTATGAGAGAATCATCTCCTGGGTTTGATGTTCTTGTAGCTGATGAGCTTAGGAATTCTGATTACTACCATGGAGAGGATGAATTTGGTAAAGCAAGAGGTCAAGATGAAAGGAACTTAGATTCTTTGAATGAATATGATTTAGGACATTCCGGCGATTATAGTTTAGCAGCCGATATTGATCGAGAAAGATTTCGTGTTCCCCAAGGTTATGATTCATATGATCACATACAGGATCCATTTGCTTGGGAGCAGCATAGAAAGGCTCCAGCCCATTTAGAGAGAAGGGCTCGCCGAAGATCTGACAGTCCCGAAAATGCTGAGGTCTCAGATCTCCGACATCATTTATCCAAGCGTAGGAAGGGCAATGGTTTAAAATCTGTTGTCAGTCATGATTATGCTCTTGACGGCCATGGTGAGGAACAAAGTCATCGGTCCTTCTCTAGGAAGGATTCACTCCAGTTACCTCTGAATGAGAGCTCCCTTGGTAATCGCTTCCGAGGTAGAATAAAGCTTCCAGCAAATGGTGGTGGTGATCACCTAGAGAGGGAAGACAGGGGGAGAATTAGGAGCAGACTGTCATCTGGAAGATTGCAGGCCACTAACCAGGGAAGGGTCCATGATAGAATAAGAGGAAGGTTGTCAGATGATGAGAGAAGAAACTCCAAGGATCGATTGATGGGGAAAGAACTAATGGGTGGTTATAGGAGTGATTTTGCTGGACCAAAAAGTCTTGCTGAACTTAAAAATGGGAGGAACACTGAGAATAAGGAGCAGCTGTCACTGGGAAAGAGAAGAAGTTTAAGGGATGATCACCCACAATCTGAAGATGATCTTCATTTTGAAGGTCCAAAACCTCTGAGTGAAATTCTGAAGGAGAAGAGAGGAGCTGGTGCTGGTGCTGACACTGAGAATGGCAAATCATCTGACAATAAGAATGAAGAAGTTACCCATAGCTCGGATACTACACCTGTCACGAACATGCAAAACGAAGTGCTGTCTAAGACCAATGAAGATGTCAACAATCATCTGCCACTAAATAATGAAGAATCATCCAAGCTTGAGGTCACTGATGCAGCTGGAGGAGACATTGATGCAACTCTTGGTCAATATGAGGAGGGAATGATGGACGATGAAGCTGGTGAGGAACAGTATTATGAAGGTGATGATCAGAGAGATGCGGATTATGAGTATGAACAAGGTGACGAGGGCTACTATGACTATGAACAAGGTGATGAGGGTGAAATTCCAGAGGAAGAGTACTTTGGAGAGGAAGATGATGGGGATGATTTTGCTAAGAAGATTGGTGTCGTTCATTCATAATTATGGAATGTCTGAGAAACAAGGGAAAGTGTCCTACACTCCTACTCTACTCTTAAAATCAAATCTCATATAGGTCTCTCTCTGACTGAGCAGCATTTCTGCTTAAATTTGCTTGTAGAACTAAGAACTGCTATCATTATAAATTTGTTTTCTTGTATTAATTAGCCCTTTTTATTTTTACCTGTATTTTCATCAAATGTATTGGATATTTTTATGTGATCAGTGGGGCGTTTTGCTGTGCTCTCGGCATATAAATGTCATGCAGAGTAGTGCAGGCCTTTAACCTTAGAAAGTTAATAATATTTTGCATTTAAAATTCAG 2656 0.433 MVTQQPQPQLQVQVQVQPQPLPQPQQPTPSSQDDALKRNTDCVYFLASPLTCKKGNECEYRHSEYARVNPRDCRYWLSGNCLNPKCSFRHPPLDGLLGTQVATTGGPSVAPSQIPTASATHAPYNSSKQAVPCFFFQKGLCLKGDRCAFLHGPPPPNTVNKVAAQVPVTSQGAENTSLKKPFGSNDKSTQERKTFQGNFAKSGGGLEAKPAPKIETALQRNIFDSEKKMPPPSAGFDNETSRFKTSSPPVTNGPAIARSNRLHQARVPDDHSFPCGKDSDEFMRESSPGFDVLVADELRNSDYYHGEDEFGKARGQDERNLDSLNEYDLGHSGDYSLAADIDRERFRVPQGYDSYDHIQDPFAWEQHRKAPAHLERRARRRSDSPENAEVSDLRHHLSKRRKGNGLKSVVSHDYALDGHGEEQSHRSFSRKDSLQLPLNESSLGNRFRGRIKLPANGGGDHLEREDRGRIRSRLSSGRLQATNQGRVHDRIRGRLSDDERRNSKDRLMGKELMGGYRSDFAGPKSLAELKNGRNTENKEQLSLGKRRSLRDDHPQSEDDLHFEGPKPLSEILKEKRGAGAGADTENGKSSDNKNEEVTHSSDTTPVTNMQNEVLSKTNEDVNNHLPLNNEESSKLEVTDAAGGDIDATLGQYEEGMMDDEAGEEQYYEGDDQRDADYEYEQGDEGYYDYEQGDEGEIPEEEYFGEEDDGDDFAKKIGVVHS 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g02442 721 MobiDBLite consensus disorder prediction 485 512 - -
Pste3g02442 721 Pfam RNA-binding, Nab2-type zinc finger 132 152 - -
Pste3g02442 721 MobiDBLite consensus disorder prediction 531 581 - -
Pste3g02442 721 MobiDBLite consensus disorder prediction 414 429 - -
Pste3g02442 721 MobiDBLite consensus disorder prediction 1 34 - -
Pste3g02442 721 MobiDBLite consensus disorder prediction 171 191 - -
Pste3g02442 721 ProSiteProfiles Zinc finger C3H1-type profile. 127 154 IPR000571 GO:0046872
Pste3g02442 721 FunFam Zinc finger CCCH domain-containing protein 17 30 93 - -
Pste3g02442 721 MobiDBLite consensus disorder prediction 369 396 - -
Pste3g02442 721 SUPERFAMILY CCCH zinc finger 128 152 IPR036855 GO:0046872
Pste3g02442 721 Gene3D - 28 93 - -
Pste3g02442 721 Gene3D - 118 197 - -
Pste3g02442 721 MobiDBLite consensus disorder prediction 1 19 - -
Pste3g02442 721 MobiDBLite consensus disorder prediction 599 635 - -
Pste3g02442 721 Pfam Zinc-finger containing family 37 92 IPR041686 -
Pste3g02442 721 ProSiteProfiles Zinc finger C3H1-type profile. 67 93 IPR000571 GO:0046872
Pste3g02442 721 ProSiteProfiles Zinc finger C3H1-type profile. 36 65 IPR000571 GO:0046872
Pste3g02442 721 MobiDBLite consensus disorder prediction 457 473 - -
Pste3g02442 721 MobiDBLite consensus disorder prediction 369 644 - -
Pste3g02442 721 SMART c3hfinal6 127 153 IPR000571 GO:0046872
Pste3g02442 721 SMART c3hfinal6 37 64 IPR000571 GO:0046872
Pste3g02442 721 SMART c3hfinal6 69 92 IPR000571 GO:0046872
Pste3g02442 721 MobiDBLite consensus disorder prediction 238 258 - -
Pste3g02442 721 PANTHER ZN-FINGER, C-X8-C-X5-C-X3-H TYPE-CONTAINING 33 720 - -
Pste3g02442 721 MobiDBLite consensus disorder prediction 224 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g02442 Pste-Chr3 17255004 17259345 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Pste3g02442 zf-CCCH_3 3.7e-12 CL0537