Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g02414 AGCAACTCAAATGCAACAAATAATGAGGTTTTCAACTTGTGCAATTGTGTTCCTTGTGTGTTTTTCTTCTATGCTACTAGTCCTTGGTCAAGGCTACTCAGATAGTGAGACTACTTTGAGAGTGTTGTTGGAAGTGAAGAAGTCTTTTGCGCATGATCCACAAAACGTTCTTAGTGATTGGTCAGAGGATAATACAGACTACTGCAGTTGGAGAGGGGTGTCATGTGAGCAGAACTCAAACTTATTAGCTAGTGACTCGGTGCAAGTGGTGGGTCTCAACCTTTCTGACTCGTCACTCGCTGGATCAATATCAACTTCACTCGGTCGTTTGCAAAACCTGCTCCACCTTGATCTCTCCTCCAACAGCCTCACGGGTCCCATTCCACCTAATCTCTCCAACCTCACTTCCTTGGAATCTCTTCTTCTGTTCTCCAACCAACTCACGGGTCACATTCCCACTGAGTTCGGCTCGATCACGAGTCTCCGAGTCATGCGACTCGGTGACAATGCACTAACGGGAACAATTCCCGCGTCTCTCGGGAACCTTGTCAATCTTGTCAACCTCGGCATGGCCTCCTGTGGGCTCACCGGGTCGATTCCGGGTCAACTGGGTCAACTCAATCTCTTGGAGAATCTGATTCTGCAGGACAACATGTTGATGGGTCCGATTCCGACCGAGTTTGGGAACTGCTCAAGCCTCACCATCTTCACTGCAGCTAATAATAAACTCAATGGCTCAATCCCGAGTGAACTGGCTCAACTCAGGAATCTACAAATTCTCAACTTCGCCAACAACAGCTTATCAGGGGAGATTCCCAATCAACTCGGTAACATGAGTGAACTCGTTTACCTGAACTTTATGGGGAACCAGCTCGAGGGTTCTATTCCACCGTCTCTAGCTCAACTGAGCAATCTTCAAAATCTGGACTTGTCAATGAACAAGCTCAGTGGAGGAATCCCAGACGAGTTAGGCAGCATGGGTGAGTTAGCATACTTGGTTCTGTCCGGTAACAACCTTAATTGTGTCATACCAAAGACCATATGCTCCAACGCAACAAGTTTGGAGCACTTGATGTTGTCAGAAAGTGGACTTCATGGTGAGATTCCAGCTGAGTTGATTCAGTGCCAGCAACTGAAGCAACTTGATTTGTCCAACAATGCATTGAATGGGTCCATACCTCTTGAACTTTATGGGTTGCAGGGGTTAACTGATCTTTTGCTGAACAATAACAGTTTGGTTGGTTCCATCTCTCCCCACATAGGGAACCTCAGTGACTTGCAGACTCTTGCTTTGTTTCACAACAATTTGCAAGGTGCTCTACCAAGAGAGATTGGAATGCTTGGCAAGTTGGAAATTCTGTATCTTTATGATAACCAATTATCAGGGGCTATTCCTATGGAGCTTGGTAATTGTTCTAGTTTGCAAATGGTTGATTTCTTTGGGAACCATTTCAGTGGGGAAATTCCCATCACTATTGGAATGCTGAAAGAGTTGAATTTCCTTCACCTCAGGCAGAATGAGCTTGTGGGTGAGATTCCAGCCCCGTTGGGTAATTGTCAAAAACTGAACATACTGGATTTGGCTGACAATCAGCTCTCAGGTGCAATTCCTGTAACGTTTGGATTCCTCAAGGCATTACAACAGCTCATGCTGTACAACAATTCTCTTGAAGGTAATCTCCCTAACCAACTGATAAATGTAGTAAACTTGACCAGAGTGAATCTTTCAAAGAACAGATTGAATGGTAGTATTGCTGCATTGTGTAGCTCTCAATCATTTCTTTCTTTCGATGTTACCGACAATGCATTTGACAGTGAAATTCCTTCCCAAATTGGAAACTCACCTTCCCTTGAGAGGCTAAGATTAGGTAACAACAAATTTTCTGGTGAAATTCCAAGGACATTGGGAAAAATCCGTGACCTGTCATTGTTAGACCTCTCAGGAAACTCACTCACTGGACCAATACCAGCTGAGCTTTCCTTGTGCAACAAATTGGCTTATATTGATTTAAACAGTAATCTTCTTTTTGGACAAATACCATCATGGCTTGGAAATTTGCCACAGTTGGGAGAGCTTAAGCTATCCTCTAATAATTTTTCTGGGCCTCTTCCATTAGGCCTATTCAAATGTTCCAAGTTGCTAGTTCTCTCTCTAAATGACAACTCTCTGAATGGAAGTCTCTCAGCTAATATTGGTGATCTTGCATACCTTAATGTCCTCAGACTTGACCACAATGAGTTTTTAGGACCAATCCCTCCAGAGATAGGTAAGTTGAGCAAGCTTTATGAGCTCCAGCTCTCCAGAAACAGCTTCAATGGTGAGATGCCAGCTGAGATTGGAAAACTTCAAAATCTTCAAATCATTTTAGACCTCAGTTACAATAATCTCTCAGGTCACATCCCACCCTCTCTTGGGACACTGTTAAAGTTAGAAGCACTTGATCTTTCGCACAATCAACTCAGTGGGGAAGTCCCTCCACAAGTTGGGGGAATGAGCAGCTTGGGAAAGCTTGATCTCTCTTACAACAACGTTGAAGGAGAATTGGATAAGAAGTTCTCCCACTGGCCAGACGAGGCATTTGAAGGAAACCTAAATCTTTGTGGAAGCCCTCTTGAACACTGCCAACGTGATGATGCTTCCAGGAGTGCAGGCCTAAATGAGTCATCAGTGGTGATAATTTCTTCCATTTCAACTTTAGCTGCAATTGCACTTTTAATATTTGCAGTGAGAATCTTCACCAAAAACAAGCAAGAATTTTGCAGGAAAGGCAGTGAAGTGAATTATGTTTACTCTTCCTCTTCCTCTTCCTCTTCCTCTCAAGCTCAGAGAAGACCACTCTTCCAACTAAATGCTGCTGGAAAGAAAGATTTCAGATGGGAACACATCATGGATGCCACAAACAATCTAAGTGATGAGTTCATGATTGGTTCTGGAGGTTCAGGGAAAATCTACAAAGCTGAATTGGCCACTGGAGAGACAGTAGCTGTCAAGAAGATTTCTTCAAAAGATGAATTTCTGTTAAACAAAAGCTTCATAAGAGAAGTTAAGACACTTGGCAGGATTAGGCATAGACATCTGGTGAAGCTAATAGGATACTGTACCAATAGAAACAGAGAAGCAGGTTGGAATCTGTTGATATATGAGTATATGGAGAATGGGAGTGTATGGGATTGGCTTCATGGGAAACCAGCCATGGTGAGCAAAGTAAAGAGGAGTTTTGATTGGGAGACAAGATTCAAAATTGCTGTGGGATTAGCTCAAGGAGTGGAGTACCTCCACCACGATTGTGTCCCAAAGATCATTCACAGAGACATCAAATCCAGCAATGTATTGCTGGATTCCAAAATGGAATCACATCTGGGAGATTTTGGACTGGCAAAGGCACTAACTGAGAAATATGACTCCAATACTGAGTCTAATTCTTGGTTTGCTGGGTCTTATGGTTACATAGCTCCAGAGTATGCATACTCCCTACAGGCAACAGAAAAAAGTGATGTTTACAGCATGGGAATAGTGCTTATGGAACTTGTTAGTGGTAAAATGCCAACAAATGAAGTTTTTGGAGCTGAGATGGACATGGTGAGATGGGTAGAGATGCACATGAATAAGCTTGGTTCTACACGAGAGGAATTGATAGATCCTGAGCTGAAACCCCTTTTACCTGGCTTAGAGTTTGCTGCATTCCAAGTGCTTGAGATAGCCTTACAGTGCACGAAAACTACACCACAGGAGAGGCCATCTTCAAGGAAAGTATGTGATCTTCTCCTCCATGTATTCAACAACAGA 3787 0.4323 MQQIMRFSTCAIVFLVCFSSMLLVLGQGYSDSETTLRVLLEVKKSFAHDPQNVLSDWSEDNTDYCSWRGVSCEQNSNLLASDSVQVVGLNLSDSSLAGSISTSLGRLQNLLHLDLSSNSLTGPIPPNLSNLTSLESLLLFSNQLTGHIPTEFGSITSLRVMRLGDNALTGTIPASLGNLVNLVNLGMASCGLTGSIPGQLGQLNLLENLILQDNMLMGPIPTEFGNCSSLTIFTAANNKLNGSIPSELAQLRNLQILNFANNSLSGEIPNQLGNMSELVYLNFMGNQLEGSIPPSLAQLSNLQNLDLSMNKLSGGIPDELGSMGELAYLVLSGNNLNCVIPKTICSNATSLEHLMLSESGLHGEIPAELIQCQQLKQLDLSNNALNGSIPLELYGLQGLTDLLLNNNSLVGSISPHIGNLSDLQTLALFHNNLQGALPREIGMLGKLEILYLYDNQLSGAIPMELGNCSSLQMVDFFGNHFSGEIPITIGMLKELNFLHLRQNELVGEIPAPLGNCQKLNILDLADNQLSGAIPVTFGFLKALQQLMLYNNSLEGNLPNQLINVVNLTRVNLSKNRLNGSIAALCSSQSFLSFDVTDNAFDSEIPSQIGNSPSLERLRLGNNKFSGEIPRTLGKIRDLSLLDLSGNSLTGPIPAELSLCNKLAYIDLNSNLLFGQIPSWLGNLPQLGELKLSSNNFSGPLPLGLFKCSKLLVLSLNDNSLNGSLSANIGDLAYLNVLRLDHNEFLGPIPPEIGKLSKLYELQLSRNSFNGEMPAEIGKLQNLQIILDLSYNNLSGHIPPSLGTLLKLEALDLSHNQLSGEVPPQVGGMSSLGKLDLSYNNVEGELDKKFSHWPDEAFEGNLNLCGSPLEHCQRDDASRSAGLNESSVVIISSISTLAAIALLIFAVRIFTKNKQEFCRKGSEVNYVYSSSSSSSSSQAQRRPLFQLNAAGKKDFRWEHIMDATNNLSDEFMIGSGGSGKIYKAELATGETVAVKKISSKDEFLLNKSFIREVKTLGRIRHRHLVKLIGYCTNRNREAGWNLLIYEYMENGSVWDWLHGKPAMVSKVKRSFDWETRFKIAVGLAQGVEYLHHDCVPKIIHRDIKSSNVLLDSKMESHLGDFGLAKALTEKYDSNTESNSWFAGSYGYIAPEYAYSLQATEKSDVYSMGIVLMELVSGKMPTNEVFGAEMDMVRWVEMHMNKLGSTREELIDPELKPLLPGLEFAAFQVLEIALQCTKTTPQERPSSRKVCDLLLHVFNNR 1259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g02414 1259 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 923 1046 - -
Pste3g02414 1259 ProSitePatterns Protein kinases ATP-binding region signature. 972 995 IPR017441 GO:0005524
Pste3g02414 1259 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 205 276 - -
Pste3g02414 1259 Pfam Protein kinase domain 971 1249 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g02414 1259 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1097 1109 IPR008271 GO:0004672|GO:0006468
Pste3g02414 1259 Gene3D Phosphorylase Kinase; domain 1 926 1046 - -
Pste3g02414 1259 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 32 200 - -
Pste3g02414 1259 Gene3D Ribonuclease Inhibitor 198 428 IPR032675 -
Pste3g02414 1259 SUPERFAMILY Protein kinase-like (PK-like) 950 1252 IPR011009 -
Pste3g02414 1259 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 486 582 - -
Pste3g02414 1259 Gene3D Transferase(Phosphotransferase) domain 1 1047 1258 - -
Pste3g02414 1259 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 583 875 - -
Pste3g02414 1259 Gene3D Ribonuclease Inhibitor 538 875 IPR032675 -
Pste3g02414 1259 FunFam Uncharacterized protein 392 485 - -
Pste3g02414 1259 SMART LRR_sd22_2 444 465 - -
Pste3g02414 1259 SMART LRR_sd22_2 107 133 - -
Pste3g02414 1259 SMART LRR_sd22_2 396 422 - -
Pste3g02414 1259 SMART LRR_sd22_2 372 393 - -
Pste3g02414 1259 SMART LRR_sd22_2 299 320 - -
Pste3g02414 1259 SMART LRR_sd22_2 804 830 - -
Pste3g02414 1259 SMART LRR_typ_2 683 707 IPR003591 -
Pste3g02414 1259 SMART LRR_typ_2 251 275 IPR003591 -
Pste3g02414 1259 SMART LRR_typ_2 444 468 IPR003591 -
Pste3g02414 1259 SMART LRR_typ_2 540 564 IPR003591 -
Pste3g02414 1259 SMART LRR_typ_2 396 420 IPR003591 -
Pste3g02414 1259 SMART LRR_typ_2 155 179 IPR003591 -
Pste3g02414 1259 SMART LRR_typ_2 828 859 IPR003591 -
Pste3g02414 1259 SMART LRR_typ_2 804 827 IPR003591 -
Pste3g02414 1259 SMART LRR_typ_2 131 154 IPR003591 -
Pste3g02414 1259 SMART LRR_typ_2 755 779 IPR003591 -
Pste3g02414 1259 SMART LRR_typ_2 299 323 IPR003591 -
Pste3g02414 1259 SMART LRR_typ_2 107 130 IPR003591 -
Pste3g02414 1259 SUPERFAMILY L domain-like 293 646 - -
Pste3g02414 1259 ProSiteProfiles Protein kinase domain profile. 966 1257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g02414 1259 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 489 1252 - -
Pste3g02414 1259 Pfam Leucine rich repeat N-terminal domain 37 72 IPR013210 -
Pste3g02414 1259 FunFam Leucine-rich repeat receptor-like protein kinase 1047 1259 - -
Pste3g02414 1259 Pfam Leucine Rich Repeat 109 131 IPR001611 GO:0005515
Pste3g02414 1259 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 292 391 - -
Pste3g02414 1259 Gene3D Ribonuclease Inhibitor 429 535 IPR032675 -
Pste3g02414 1259 PRINTS Leucine-rich repeat signature 804 817 - -
Pste3g02414 1259 PRINTS Leucine-rich repeat signature 375 388 - -
Pste3g02414 1259 SUPERFAMILY L domain-like 591 846 - -
Pste3g02414 1259 Gene3D Ribonuclease Inhibitor 33 197 IPR032675 -
Pste3g02414 1259 SUPERFAMILY L domain-like 36 339 - -
Pste3g02414 1259 SMART serkin_6 966 1257 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g02414 Pste-Chr3 17080250 17084141 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g02414 38 708 Receptor kinase-like Gene Family AT1G17750 33.931 3.49e-96 331
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pste3g02414 Pkinase 2.8e-45 CL0016