Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pste3g02402 | GCCAAGCATGGAGGTCCTCGCCCTATTGTTGTACTGTCTCCTTTACGTGGTTGTCATGGTCCTTTTCAATCTTCTCCTCCAGGCGAGAAAGTTGAAGAACCTCCCTCCAGGGCCACCCTCTATCCCCGTAATCGGAAACCTCCACCACCTTAAACGGCCCCTCCACCGCACCTTCAAAGCCCTCTCCGACAGCTACGGCCACGTCATCTCCCTCTGGTTCGGCTCCCGCCTCGTGGTCGTCGTTTCCTCCCACTCCCTCTTCCAAGAGTGTTTCACCAAAAACGACGTCGTCCTCGCCAACCGGCCCCGCTTCCTCTCCGGTAAATACATCTTCTACAACTACACCACCCTAGGCTCCTCCCCCTACGGCCACCACTGGCGCAACCTCCGCCGCATCACCGCCCTCGACGTCCTCTCCGCCCACCGCATCCACGCCTTCACCGCCATCCGAAGGGACGAAACAAACAGACTGATACAAAAACTGGCTGAGCACTCCCTCACCCACTTCGCCGAGGTGGAACTCACTTCCAAATTCTACGACATGAACTTCAACAACATAATGAGGATGATCTCCGGGAAGAGGTACTACGGTGATGATTGCGACATGGCGGACGTGGAAGAGGCTAAGCAGTTCAGGGCCATGGTTTCGGAGCTGCTCAAGTTGTCCGGGGCCAATAACAAGAACGATTTCATGCCCATACTCCGCTTGTTTGATTTTGAAAACCTGGAGAAGAGGTTGAAGAACATCAGTAGCAAAACCGATACGTTCTTGAGAGGACTCATTCAGGAACACCGCGCCAAGAATGAGCGTGCCAATACCATGGTTGATCATCTCCTCACTTTGCAACAATCCCACCCTCACTACTATACTGATCAAATCATCAAAGGCCTAGCTTTGGGAATGCTTGTTGCTGGAACAGATTCATCAGCTGTAACTTTAGAGTGGGCATTATCTTGTATGTTGAACAATCCAGAAGTGTTGAAAAAAGCAAATGATGAATTGAATTTCTATGTGGGACAAGATCGAATCAGACCTCTCAAACTTCCTTACCTTAAAAATATTATTTATGAAACACTTAGATTGTACACTCCTGCTCCGTTGTTGTTACCACATTCATCTTCGGAAAAATGCATTATCGGGGGATTCAAAGTTCCACAAAACACTATAGTGTTGATTAATGCTTGGTCCATTCATAGGGACCCTCAAGTGTGGAGTGAAGCCACGAGTTTCAAGCCTGAAAGATTTGAAAAGGAAAGTGAGTTAGACAAATTAATTGCATTTGGGTTAGGAAGAAGAGCTTGTCCCGGAGAAGGTTTGGCCATGCGTGTGCTCAGCTTGACTTTAGGATTATTGATTCAATGTTTTGAATGGAAACGAGTTGATGATCAAGAGATTGATATGAGAGAGGAAAGTGGATTCACTTTGTCTAGGTTAATCCCATTGAAAGTCATGTGTAAAGCACGCCCAATCATCAACAAGCTTATGAAGGCTGATTCTGGATCTTGCAACAGAAGCCAACGATGCAGCAACATGAACAATTTATTAGATGATGATTGGAAGCTTTTGATTCAAAAAGAAGATAAGTTAACACAGACAAAAGCAATCCGGCCCATGACCATGACCCCTATGATGTACTACTTCCTCCTTTCTCTTGCTTTGATTCTCAGCTTCAAGTTTTTAGTTCGAAGAACAAGAGCCAAAAACCTTCCACCATGTCCACCAAGTCTTCCCATAATCGGCAACCTCCACTACATGAAGCCCCCACTCCACCGCTCCCTCCTGGGCCTAGCGCAAAAGTATGGCCCCATCTTCTCTCTCTGGTTCGGTTCACGTTTCGTGGTGGTCATAACTTCCCCAACCTTGGTTCAAGAATGCTTCACCAAACACGACATCGTCCTAGCGAACCGGCCTCGTTTTCTCACAGGAAAGTACTTGTTCTACAATTACTCGAGCATGGGTTCCTCCCCCTACGGCGACCACTGGCGCAACCTTCGCCGCATCATCACCATTGATGTTCTCTCCACTCACCGTCTCAACTCCTTCTTTGAGATCAGAAGGGAGGAAACCATGAGGGTCATACAAAAGCTTGTTAGGGAAACATGCAAGGGCTTCACCCAAGTGCAGCTCAGACCTAGACTGACGGAGATGTCATTCAACAACATGATGAGAATGATATCTGGAAAGAGATACTACGGGGATGACAGTGATGTAACAGATGCGGAGGAAGCGAAACAGTTCAGAGAGATAATCACGGAGATTATGTCCTTGCTGGGTGCAAACAACAAGGGAGACTTCTTGCCTTTGCTTCGGTGGTTCGATTTTGATGGTTTGGAGAAGAGGCTGAAGTCGATTAGCACTAGGGCAGATGCTTTCTTGCAAGGACTCGTTGATGACCATCGCAGTGGCAAGCACAAAGCCAACTCAATGATTGAACATCTCTTAACCATGCAACAATCGCAGCCAGAATACTATTCCGATCATATTATCAAAGGCCTCATTCAGGGCATGCTTCTGGCTGGAACAGATACAACAGCAGTGACTATAGAGTGGGCAATAGCTTCTTTATTAAATCACCCTGAGATATTGAAAAAAGCAAAGGATGAAATAGACAATTGTGTAGGACAAGATCGTTTGGTAGATGAATCAGATCTTCCGAATCTTTCTTATCTTCAAAACATTATTTACGAGACACTTCGATTGTTTTCTCCCGCTCCATTACTGTTGCCTCATTATTCCTCAGATCAGTGCACTATTGGGGGATTCACTATTCCACGTGACACCATAGTGTTGATTAATGCATGGGCCATTCAAAGAGATCCTGAAACTTGGAGTGATGCTAAATGTTTTAAGCCCGAAAGATTTGAAAAAGAAGGGGAAGCAATTAAGTTAATTCCATTCGGATTAGGAAGAAGGGCTTGTCCCGGAATAGGTTTAGCACATCGTTCAATGGGCTTAACTTTGGCCCTATTGATTCAGTGCTTTGAATGGAAACGACCAACTGATGAAGAAATTGATATGAGGGAGAATAAAGGAGTGGCAATGCCAAAGCTAATTCCATTAGAAGCTATCTGTAAAGCGCGACCAATCATCCAGAACTTATGCTCAGAC | 3109 | 0.46 | MEVLALLLYCLLYVVVMVLFNLLLQARKLKNLPPGPPSIPVIGNLHHLKRPLHRTFKALSDSYGHVISLWFGSRLVVVVSSHSLFQECFTKNDVVLANRPRFLSGKYIFYNYTTLGSSPYGHHWRNLRRITALDVLSAHRIHAFTAIRRDETNRLIQKLAEHSLTHFAEVELTSKFYDMNFNNIMRMISGKRYYGDDCDMADVEEAKQFRAMVSELLKLSGANNKNDFMPILRLFDFENLEKRLKNISSKTDTFLRGLIQEHRAKNERANTMVDHLLTLQQSHPHYYTDQIIKGLALGMLVAGTDSSAVTLEWALSCMLNNPEVLKKANDELNFYVGQDRIRPLKLPYLKNIIYETLRLYTPAPLLLPHSSSEKCIIGGFKVPQNTIVLINAWSIHRDPQVWSEATSFKPERFEKESELDKLIAFGLGRRACPGEGLAMRVLSLTLGLLIQCFEWKRVDDQEIDMREESGFTLSRLIPLKVMCKARPIINKLMKADSGSCNRSQRCSNMNNLLDDDWKLLIQKEDKLTQTKAIRPMTMTPMMYYFLLSLALILSFKFLVRRTRAKNLPPCPPSLPIIGNLHYMKPPLHRSLLGLAQKYGPIFSLWFGSRFVVVITSPTLVQECFTKHDIVLANRPRFLTGKYLFYNYSSMGSSPYGDHWRNLRRIITIDVLSTHRLNSFFEIRREETMRVIQKLVRETCKGFTQVQLRPRLTEMSFNNMMRMISGKRYYGDDSDVTDAEEAKQFREIITEIMSLLGANNKGDFLPLLRWFDFDGLEKRLKSISTRADAFLQGLVDDHRSGKHKANSMIEHLLTMQQSQPEYYSDHIIKGLIQGMLLAGTDTTAVTIEWAIASLLNHPEILKKAKDEIDNCVGQDRLVDESDLPNLSYLQNIIYETLRLFSPAPLLLPHYSSDQCTIGGFTIPRDTIVLINAWAIQRDPETWSDAKCFKPERFEKEGEAIKLIPFGLGRRACPGIGLAHRSMGLTLALLIQCFEWKRPTDEEIDMRENKGVAMPKLIPLEAICKARPIIQNLCSD | 1034 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pste3g02402 | 1034 | CDD | CYP81 | 64 | 479 | - | - | |
| Pste3g02402 | 1034 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 964 | 973 | IPR017972 | GO:0005506|GO:0016705 | |
| Pste3g02402 | 1034 | PRINTS | P450 superfamily signature | 890 | 901 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste3g02402 | 1034 | PRINTS | P450 superfamily signature | 962 | 971 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste3g02402 | 1034 | PRINTS | P450 superfamily signature | 837 | 854 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste3g02402 | 1034 | PRINTS | P450 superfamily signature | 971 | 982 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste3g02402 | 1034 | SUPERFAMILY | Cytochrome P450 | 568 | 1025 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste3g02402 | 1034 | SUPERFAMILY | Cytochrome P450 | 33 | 486 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste3g02402 | 1034 | FunFam | Cytochrome P450 family protein | 558 | 1028 | - | - | |
| Pste3g02402 | 1034 | CDD | CYP81 | 599 | 1018 | - | - | |
| Pste3g02402 | 1034 | PRINTS | E-class P450 group I signature | 619 | 640 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste3g02402 | 1034 | PRINTS | E-class P450 group I signature | 846 | 872 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste3g02402 | 1034 | PRINTS | E-class P450 group I signature | 826 | 843 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste3g02402 | 1034 | PRINTS | E-class P450 group I signature | 889 | 907 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste3g02402 | 1034 | PRINTS | E-class P450 group I signature | 595 | 614 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste3g02402 | 1034 | PRINTS | E-class P450 group I signature | 930 | 954 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste3g02402 | 1034 | PRINTS | E-class P450 group I signature | 961 | 971 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste3g02402 | 1034 | PRINTS | E-class P450 group I signature | 714 | 732 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste3g02402 | 1034 | PRINTS | E-class P450 group I signature | 971 | 994 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste3g02402 | 1034 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 425 | 434 | IPR017972 | GO:0005506|GO:0016705 | |
| Pste3g02402 | 1034 | FunFam | Cytochrome P450 family protein | 24 | 489 | - | - | |
| Pste3g02402 | 1034 | Gene3D | Cytochrome P450 | 21 | 486 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste3g02402 | 1034 | Gene3D | Cytochrome P450 | 556 | 1018 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste3g02402 | 1034 | PANTHER | CYTOCHROME P450 82C3-RELATED | 549 | 1025 | - | - | |
| Pste3g02402 | 1034 | Pfam | Cytochrome P450 | 33 | 473 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pste3g02402 | 1034 | Pfam | Cytochrome P450 | 568 | 1014 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pste3g02402 | Pste-Chr3 | 17022818 | 17034674 | Dispersed/Proximal |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Pste3g02402 | 7 | 492 | Cytochrome P450 | AT4G37370 | 50.913 | 1.52e-177 | 525 |