Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g02389 GCTTTGCTACTTTCTCTCTCTTCACAGAAAGCTGCTGTGCAAGGGACACTCCCTCTTCGCAACATAAATATGCGCCGCGACAACATTAAATATATTTTTTCCCTATGCTATTCTTTTTTTTTATTAATTGTGTTACATAAATAATTGAGTATGTATATAATTTTTTTACCACGTTAGTTCCATTTCTTCATCTTCTCTAACACACTCCACGGTTCTCTCAACACTGCTTGCCCTAGATCCATGGCTTCCTTCATCAGCGTATGCTGAGTTTCAATGCTACCCTTTTCCACTCTTACCCTTGGGTTGCTGGGAAAAATTTCTGGAGCTCTATATCAAGTTGGAAATCCACTTTCCCAAGCTTCTTAGGATCTGGGTATTGTAAATTCGCTAGCTTTGACATCTTCTGGATTGCAAATTAGCAAGGTTTGCACTTGGAAAGTTGTTCTGCTGTGCAAGTAACTCTCATTTTCAAGTTGTCATTGTGTTTGCTTCATGTGGGTAGAGTAAAGTAGTAATTTTTAAGACTTTTGTGGTTTGATTTGTTGAATTGGAGGGTTTCACTGCTAGTTAGATTGTGCATCTTCTAGGGGTTTTATGGATGGGTTGTGTGTCGTGTTTGCTGACTTGCAGCCAAATTTGGATTGAGATGAATACTGGGTTGCTACTGTAGCTAATATTATGAATTATTTTGTGTGACATTTGATAAGACTAGTGCCTGAGTTTGGTGGTTATGGGTACTGAAGAAGAGGATAACAGGATAGAAATATAGAATAGTTGAAATGCAATTAAAGGGGTGAGAGTTGAGATTGGAGTTTGGTTCTGTGAGAGGGAGGGTTGGTTGGTGTGCAAAATGGGTTGCATGTGTTGCAAGCCGTCTGCCATTGAAGATAGTAAGGAGAGTCCAAGGGAGCGATTAACGAGCAAGGCTGTGTCGGACTTGCGTGTATCTAGGGGGACTTCATCAAGGAGGGAGGAAGCGTTTCGAGTAAAGGATAGATATGATAACAATGATGGAAGAACCGCTTTGATTGATAAGCAAGGGAATGGTTCTGTCAGAGTGCAAGGTGATAGCAGCTTTGAAAGGAAGAGGGACAAAATGGAATATGCTGTTGCTCAACATCCGGGGAATGGTAGTGTTCCCAAGGCCATGGAAGGTGAGCAGGTTGCAGCTGGATGGCCCTCATGGCTGGCAGCAGTGGCTGGAGAGGCTATCAAGGGATGGCTGCCTCGGCGTGCTGATTCTTTTGAGAAGTTGGATAAAATTGGACAGGGAACTTATAGCAATGTTTATAGAGCTCGTGATCTTGAACAAAGAAAGATTGTTGCTTTGAAAAAAGTGAGGTTTGATAATCTTGAGCCTGAGAGTGTTCGCTTCATGGCAAGGGAAATTCACATTCTACGTAGGCTTGATCATCCAAATGTCATAAAACTGGAAGGCTTGGTTACATCAAGGATGTCTTGCAGTTTATACCTTGTGTTTGAGTACATGGAGCATGACTTGGCTGGGCTTGCATCACATCCTGGACTGAAGTTTACAGAAGCACAGGTTAAATGTTACATGCAGCAACTTTTACGTGGACTTGATCACTGCCACAGCTGTGGTGTACTGCACCGTGACATTAAGGGCTCCAATCTTTTAATTGACAACAATGGGATATTGAAAATTGCAGATTTTGGTTTAGCAAGCTTTTTTGATCCCAATCAAGCTCAGCCACTGACAAGCCGAGTTGTTACTCTTTGGTATCGGCCTCCAGAACTTTTGCTTGGAGCCACTTATTATGGCACTGCTGTAGATTTATGGAGTACAGGTTGCATACTTGCTGAGCTATATGCTGGCAAGCCTATAATGCCTGGAAGGACTGAGGTGGAGCAATTACATAAAATTTTTAAACTTTGTGGTTCACCTTCTGAGGACTATTGGAGAAAATCAAAGTTGCCTCATGCAACAATATTTAAGCCTCAACAGCCCTATAAGCGATGTGTTTCTGAAACTTTCAAGGACTTTCCTGCACCAGCAAAAGAATTGATAGAGACCCTTTTGTCCATAGATCCTGCTGATCGGGGAACTTCGGCATCTGCTTTGAATAGTGAGTTCTTCTCAACAAAGCCTCTACCTTGTGATCCCTCAAGCTTACCAAAGTATCCTCCTAGCAAAGAATTTGATGCAAAAGTGCGGGATGAAGAAGCTAGAAGACAAGGAGCAGCTGGTAGCAAGGGCCAGAGACATGATCTTGAGAGAAGAGGTGCAAGAGAATCACGAGCGGTTCCTGCACCTGATGCCAATGCTGAACTGGTCTTATCAATGCAGAGAAACAGTGAAGATTTAGTGTGGTTGTCTCTATGTTTCTCCTCTCGTATGAGAGGATTTCCACATCAAATAGAGCAAAAGATGCAGAAGCTCCATATTAAGAGACAAGGGCAGGCTAATTCTCAGAGCAGGAGTGAGAAATTTAACCCTCATCCTGGAGAAGTTGCTTCTGGATTTCCCATTGATCCTCCAAGACCATCACAAGCTGCAGGAGTTAGTGTGGATCCCCCGGTTCATCAACATAAAAGAGCCTCCCATTCAGGCCCACTGACTCACCGTGCGGCATGGGCTAAAGCTGGGAAGAACCAGGAAGATGCTCCAAATATTTCAATGGGGGGTGACTCATCAACAACATCTGGCTTAGTTGCAGCAAGGAGGAGTATGATGTTAGACGATCGAAGAGAAAGATCGGGTTCATCACAAGCAGATGCCCCAAAGCTAATAAGCAGGTTCCCTGGATCCTTCAAGGAGGCCTCTGAGTCAATGATGCAACAAGATCAGAAGCATCATGCACATGCTCCTCAAAAGGAAGAAGGGAGAGGCAGCAACAAAGACTCAATTCTTGTTGGTTATGGGTCCAAGGGTCATAAAATTCATTATTCCGGTCCATTGCTAGTTCCATCAAGCAACATGGATCAGATGTTGAAGGACCATGACCGCCAAATACAAGAGGTAGTACGAAGAGCACGATTGGACAAGGCAAAAATGAGGAGACTCCAAGCTGAGGGGAACCAGATAACCAATTCATTATTTGTTTCTGGTCGCTGAGTTGTAGAACCTGATGCTGCAAAGCATAATTAAGAATATTTGATTATTTTTTTGCCCCTTTTTCTTTTTCTAATTTGCCTGTACAGGGAGTTAGTATCCCTTGCAAAATACCTTCCCTATGGCCGTGTTAGGTAACTCTAGCTCACAAATCTTCCCTCCACTTTATCAGATCACATGCTTATTCCTTCCACGTACAGCTGCAATTTCTAAAATGTGGCCATTCTTGCAAAGCTTATCAACCTTGAGTTGTAAACTTGTAATAGGATACTGGGAGACCTTGTACTCCTCATGTTTAACATATGTTAGAGTAATTATCACTGGGAAG 3401 0.4287 MGCMCCKPSAIEDSKESPRERLTSKAVSDLRVSRGTSSRREEAFRVKDRYDNNDGRTALIDKQGNGSVRVQGDSSFERKRDKMEYAVAQHPGNGSVPKAMEGEQVAAGWPSWLAAVAGEAIKGWLPRRADSFEKLDKIGQGTYSNVYRARDLEQRKIVALKKVRFDNLEPESVRFMAREIHILRRLDHPNVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFTEAQVKCYMQQLLRGLDHCHSCGVLHRDIKGSNLLIDNNGILKIADFGLASFFDPNQAQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKSKLPHATIFKPQQPYKRCVSETFKDFPAPAKELIETLLSIDPADRGTSASALNSEFFSTKPLPCDPSSLPKYPPSKEFDAKVRDEEARRQGAAGSKGQRHDLERRGARESRAVPAPDANAELVLSMQRNSEDLVWLSLCFSSRMRGFPHQIEQKMQKLHIKRQGQANSQSRSEKFNPHPGEVASGFPIDPPRPSQAAGVSVDPPVHQHKRASHSGPLTHRAAWAKAGKNQEDAPNISMGGDSSTTSGLVAARRSMMLDDRRERSGSSQADAPKLISRFPGSFKEASESMMQQDQKHHAHAPQKEEGRGSNKDSILVGYGSKGHKIHYSGPLLVPSSNMDQMLKDHDRQIQEVVRRARLDKAKMRRLQAEGNQITNSLFVSGR 741
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g02389 741 Gene3D Transferase(Phosphotransferase) domain 1 215 455 - -
Pste3g02389 741 Coils Coil 708 728 - -
Pste3g02389 741 MobiDBLite consensus disorder prediction 435 470 - -
Pste3g02389 741 MobiDBLite consensus disorder prediction 1 43 - -
Pste3g02389 741 SMART serkin_6 132 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g02389 741 CDD STKc_CDK9_like 132 416 - -
Pste3g02389 741 ProSitePatterns Serine/Threonine protein kinases active-site signature. 252 264 IPR008271 GO:0004672|GO:0006468
Pste3g02389 741 FunFam probable serine/threonine-protein kinase At1g54610 215 456 - -
Pste3g02389 741 ProSitePatterns Protein kinases ATP-binding region signature. 138 161 IPR017441 GO:0005524
Pste3g02389 741 MobiDBLite consensus disorder prediction 422 473 - -
Pste3g02389 741 MobiDBLite consensus disorder prediction 519 534 - -
Pste3g02389 741 MobiDBLite consensus disorder prediction 644 675 - -
Pste3g02389 741 SUPERFAMILY Protein kinase-like (PK-like) 126 424 IPR011009 -
Pste3g02389 741 MobiDBLite consensus disorder prediction 517 605 - -
Pste3g02389 741 Pfam Protein kinase domain 132 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g02389 741 MobiDBLite consensus disorder prediction 648 669 - -
Pste3g02389 741 MobiDBLite consensus disorder prediction 12 27 - -
Pste3g02389 741 Gene3D Phosphorylase Kinase; domain 1 119 214 - -
Pste3g02389 741 FunFam probable serine/threonine-protein kinase At1g54610 119 214 - -
Pste3g02389 741 PANTHER CELL DIVISION PROTEIN KINASE 130 422 - -
Pste3g02389 741 ProSiteProfiles Protein kinase domain profile. 132 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g02389 Pste-Chr3 16927149 16934063 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g02389 124 473 Core Cell Cycle Gene Families AT5G10270 52.186 3.03e-119 366
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Pste3g02389 Pkinase 4.5e-69 CL0016