Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g02386 CTCTCTCTTTGGAAAAGAAGGGAAAGAATTCCAATTCCCTCTGTCCCACTATTGTCTATATGAAACTATTGTTTCCTACTTTACATATTATCTACTTTTCTTTCTTCTAGTAAAGAGAGAGCAATGAGTACAGGAGACAGGCCAAAAATGCATGAGCAAACTGGTTGCTTTGATCCCAACACAGCAGGAGAAAGTGTACCCTCTCTAAAGGATAACTTTCCTCAAACTCTGGCAGACCCTCTAACTCCATCACCTATGGCTGTAGGCAACACCACAGGCAGCAATAATAGCCTTGAAGAGAATCTCAGGCTTTCTGTGGAGGAGTTCTCTTATCACCATCACAATCCACAGCAACAGCACCATGAAGATGCATCCACCTATGCAAGTGGAATAACTGCCACATCTATTGACATCCAACATCCACAGCATCTTGGTTTGAACATGGGAAACGTCTACATCAATAACAACAACATGGATAATCGTTTGGTGCAAGAGGTCATTGATGCCCTTCCCTATCAGCACTCCTCTTGGGACCCTACAACTGTTCAGGAATTACAAGAAATGGCATATGCTAATCACACAGAACAACAACAACAACCAAATGAACAACAATTTCAGCAAATTGAGACTCAAAACTGCAGCCAAAGCTACAATCCCTCTTCCATTCTAGACCATCCTTACCCTTCACCAGATCTCCTAAACCTTCTCCACTTACCAAGATGCTCAGCCTCATCTTTGCTCACCAATCCCACCATTTGCCTCACAAACCCAACTCAGAACACACCAAACTTTCAGAACCCAATGACCTTTCTTGGGGACCTTCCAATAGGATCAGACAACACAAGTGCATCCTCAGTTTTGTATGATCCTCTATTCCATCTGAACCTGCCTCCACAGCCTCCAGCCCTCAGAGAGCTGTTTCAGTCTCTCCCCCGCGGCTACAGCTTGCCAACCAACTCAAGGAATGGCTCACTCTTTGGAGGGGATGATATAGAGGCAGATGGGACCCAACTTGACATGGGAGTTCTCGAATTCAACAGGGTCACACCTTCTGCTGCCAAAGGAAGAGGAGGAAAACCTACCAAACCTTTCCCAACTGAGAAACAAAGAAGAGAGCAACTGAATGGAAAATACAAAATCTTGAGGAGTCTCATCCCAAACCCCACCAAGACTGATAGAGCATCTGTGGTGGGGGATGCCATTGACTACATAAGAGAGCTGATTAGAACAGTCAATGAGCTCAAACTACTCGTGGAGAAGAAAAGATATGGGAAGGAGAGGTGTAAGAGGCCAAAAACAGAAGAAGATGCCGCTGAGAGCTGTAACATAAAGCCTTTTGGTGATCCAGATGGGGGCATAAGGACCTCATGGCTCCAGAGAAAATCCAAAGACAGTGAGGTTGATGTCCGGATTATTGATGACGATGTCACAATTAAACTCTTCCAGAGAAAGAAGATTAACTGCCTCCTGTTTGTCTCCAAAGTTCTAGATGAACTTCAGTTAGAGCTTCACCATGTTGCTGGTGGACATGTTGGAGAATATTGCAGTTTCTTGTTCAATAGCAAGATAATGGAAGGTTCTTCAGTCTATGCAAGTGCCATAGCCAACAGGGTGATTGATGTTCTGGACAGTCACTACACAGCAGCAATCCCACATACAAATAGCTATTAGAGAAGGAGAG 1681 0.4438 MSTGDRPKMHEQTGCFDPNTAGESVPSLKDNFPQTLADPLTPSPMAVGNTTGSNNSLEENLRLSVEEFSYHHHNPQQQHHEDASTYASGITATSIDIQHPQHLGLNMGNVYINNNNMDNRLVQEVIDALPYQHSSWDPTTVQELQEMAYANHTEQQQQPNEQQFQQIETQNCSQSYNPSSILDHPYPSPDLLNLLHLPRCSASSLLTNPTICLTNPTQNTPNFQNPMTFLGDLPIGSDNTSASSVLYDPLFHLNLPPQPPALRELFQSLPRGYSLPTNSRNGSLFGGDDIEADGTQLDMGVLEFNRVTPSAAKGRGGKPTKPFPTEKQRREQLNGKYKILRSLIPNPTKTDRASVVGDAIDYIRELIRTVNELKLLVEKKRYGKERCKRPKTEEDAAESCNIKPFGDPDGGIRTSWLQRKSKDSEVDVRIIDDDVTIKLFQRKKINCLLFVSKVLDELQLELHHVAGGHVGEYCSFLFNSKIMEGSSVYASAIANRVIDVLDSHYTAAIPHTNSY 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g02386 515 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 324 382 IPR036638 GO:0046983
Pste3g02386 515 SMART finulus 323 372 IPR011598 GO:0046983
Pste3g02386 515 Gene3D - 324 381 IPR036638 GO:0046983
Pste3g02386 515 PANTHER TRANSCRIPTION FACTOR BHLH91 8 511 IPR045895 GO:0006355|GO:0048658
Pste3g02386 515 MobiDBLite consensus disorder prediction 17 31 - -
Pste3g02386 515 MobiDBLite consensus disorder prediction 1 31 - -
Pste3g02386 515 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 317 366 IPR011598 GO:0046983
Pste3g02386 515 CDD bHLH_AtMYC1_like 322 386 IPR045896 -
Pste3g02386 515 Pfam Helix-loop-helix DNA-binding domain 325 366 IPR011598 GO:0046983
Pste3g02386 515 MobiDBLite consensus disorder prediction 152 180 - -
Pste3g02386 515 MobiDBLite consensus disorder prediction 307 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g02386 Pste-Chr3 16914066 16916496 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g02386 9 513 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31210 36.496 3.42e-92 286
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pste3g02386 HLH 5.7e-09 No_clan