Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g02370 ATGATACAGAATCTGCACAAGGGGCGGTTCTTTGGACTTCAGAAGATAGGCACAAAAAGAATTCCACAGCATGTAAGGTCTCACAAACAGACCGATCTTGAGAGAGCAAAGACTACATTGTTGTTAGCATCACTGCCTAAATCGTTACCTTGTAGAAATAAAGAAATGGAGGAGATAACTACATTCATCAAAGGTGCCATTTCTTATGATCAATGTCTGGGGCGTTGCCTCTACATTCATGGTGTTCCGGGAACTGGCAAGACAATGAGTGTATTATCTGTAATGCGGAGTTTGAGTTCAGAAGTTGATGCAGGAAACATCAGACCGTACTCCTTTGTGGAGATTAATGGTTTGAAATTGGCATCACCAGAGAATATTTATAGGGTCATATATGAGGCACTAAATGGACACAGGGTCAACTGGAAAAAGGCTCTCCACTTGCTAAACGAGAGATTTGTAGAAGGAAAGAAAACCAGAGATGAGGATGACCAGCCATGTATTTTGCTTATTGATGAACTTGATCTTCTAGTAACCAGAAACCAGTCGGTTCTGTACAATATTCTTGACTGGCCTACTAAGCCAAACTCCAAGTTAATTGTCATAGGGATAGCGAATACTATGGATCTTCCAGAGAAGTTACTTCCTCGTATATCAAGTCGAATGGGAATACAGAGGCTATGTTTTGGCCCATATAATTATCAACAGCTTCAAGAAATTATTTCAAGTCGTCTCAAGGGAATTGATGTATTTGAAAAGCAAGCCGTAGAATTTGCTTCAAGAAAGGTTGCAGCAATCTCCGGAGATGCGCGTCGTGCTTTGGAGATATGCAGACGTGCAGCTGAAATAGCAGATTATCGTATGAAGAAGTTAATTTCTAATCCTGATTTTGTTACTACAGGAAAGGGACTTGTTGGAATGGTAGATGTGGAAGCGGCCATTCAAGAAATGTTCCAAGCACCTCATATTCAAATGATGAAAAGCAGTTCCAGACTTAGCAAAATTTTCCTGACAGCTATGGTACACGAGCTTTATACTACAGGAATGGGGGAAACCACTTTTGAAAAGTTGGCAATGAGGGTTTCACGCCTTTGTACCAGCAACGGGGAAGATTTTCCTGGATATGATACTCTCCTGCAAGTTGGATGTAAGCTAGGTGAGTGCAGGGTTATTATATGCGAAGCAGGTGCTAAGCACAAGTTGCAAAAATTGCTGCTTAATTTCCCGAGTGATGATGTTGCCTTTGCGCTGAGAGACTGTAAAGATCTACCATGGCTGTCGAAGTACCTAATGTAGGAATGAGAATTACGTTAAGTTCAACCCAAATGCTTGATGCTTGACGTGAGTGGTTCTCAACAGTCTCATCCCTTACGTATGTTCATGGGATTGATCCCCTTTTGGATATGAAGTCACAATTTGAGAGCTAACTTGGTGTCAAGGAGATTAGGCAGACTCGGGAGTTTACTACTACCCGTTTATACAAACCACATTACGTTCTCGAAAAAACAATTTTGTCCACAACTATTATTTGAATTATTTATGACTTGAATGATTTTCGTATTCTCCGATTCTTTCAAATAATCTTCAATGAAAAGATAAGC 1598 0.4043 MIQNLHKGRFFGLQKIGTKRIPQHVRSHKQTDLERAKTTLLLASLPKSLPCRNKEMEEITTFIKGAISYDQCLGRCLYIHGVPGTGKTMSVLSVMRSLSSEVDAGNIRPYSFVEINGLKLASPENIYRVIYEALNGHRVNWKKALHLLNERFVEGKKTRDEDDQPCILLIDELDLLVTRNQSVLYNILDWPTKPNSKLIVIGIANTMDLPEKLLPRISSRMGIQRLCFGPYNYQQLQEIISSRLKGIDVFEKQAVEFASRKVAAISGDARRALEICRRAAEIADYRMKKLISNPDFVTTGKGLVGMVDVEAAIQEMFQAPHIQMMKSSSRLSKIFLTAMVHELYTTGMGETTFEKLAMRVSRLCTSNGEDFPGYDTLLQVGCKLGECRVIICEAGAKHKLQKLLLNFPSDDVAFALRDCKDLPWLSKYLM 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g02370 430 Pfam ATPase family associated with various cellular activities (AAA) 77 223 IPR003959 GO:0005524|GO:0016887
Pste3g02370 430 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 42 293 IPR027417 -
Pste3g02370 430 PANTHER CELL DIVISION CONTROL PROTEIN 6-RELATED 14 424 - -
Pste3g02370 430 SMART AAA_5 73 227 IPR003593 GO:0016887
Pste3g02370 430 FunFam Origin recognition complex subunit 1 226 318 - -
Pste3g02370 430 Pfam AAA lid domain 251 284 IPR041083 -
Pste3g02370 430 Gene3D - 29 225 IPR027417 -
Pste3g02370 430 FunFam Origin recognition complex subunit 1 30 229 - -
Pste3g02370 430 Gene3D - 226 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g02370 Pste-Chr3 16807658 16812192 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g02370 4 429 Core DNA Replication Machinery Family AT4G14700 76.291 0.0 691