Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g02356 CTTCACTTCTGCCACCTCTGAACCTTCTTTATTTTGTGCATATTCTTCCATCACCCTCTTTCTTTCTCCATCTGCCACTTTATGCACTCTATTATAACTCAACAAACAACACTCTCAAACAACTTGCTTTCTTTCCCTCATGGACCTTCCTATACGTGTTTGTCTTTTGCTGATTCTCCTTAGTCTCTTCTCGGGCACTCAAGGTTACACCTTCTATGTTGGTGGAAAAGATGGGTGGGTTTTGTATCCTTCTGAGAATTACAATCACTGGGCTGAGAGGATGAGATTCCAAGTCAGTGACACTCTTGTTTTTAAGTACAACAAGGGCTCGGACACGGTGTTGGTGGTGAACAAAGACGATTATGAGAAATGTAACAAGAAGAACCCGGTGAAGAAGTTTGAGGATGGTGATTCTGAGTTTCAGTTTGATCGATCAGGTCCTTTTTACTTCATCAGTGGGAAAGATGACAATTGTGAGAAGGGTCAGAAGCTGATTATTGTGGTCTTGGCTGTGAGAGAGCCACCTCCTTATTATCCTCCAAACGTTCCCTATGTTCCAACTCCTCATCATCCACCTTATGTTCCATCACCTCCTAAAACTCATTCCCCTGTTTACAGTCCTCCCTATGCTCCTCCAAAACCACCTTCACCTATTCATTATCCACCTTATGTTCCAACACCTTCCCCTGTTTACAGTCCTACCACTCCTCCAAAAGCACCTTCACCTACCACTCCCAATTTTCCAACACCTCCACAGACTCCTTCCCCTGTTTATAGTCCTCCTAATGTCCCAACTACTCCTCCAAAAGCTCCTTCCCCAGGCAACCACCCACCCTATGTTCCAACAACACCCTCTCCTATTTACACTCCTTCACCTGGGAACCAGCATTATGTCCCAACTCCTCCAAACACTCCCTCACCTATTTCTCAACCTCCCTTTGTTCCAATAACACCATCTCCATTTCCGCAACCACCTTATGTGCCACAGCCAGAAACTCCTTCCCCTGTCTCCGAACCTCCTTACACTCACTCTCCAACATCCCAGCCACCATACATGGCAACACCTCCAACAAACCCTGATGCCCCAACTCCAACATCCATTTCCCCAATACAGGAACCACCATCATCCTCAATTTCACCATCACTATCACCATCACCACCACCACTCACACCATATAACACACCTCCCTCCACATCACCCTCATCATCCACAACATCACCATCTCCGTCGTCTGTCCCGCCGGCAACAACTCCCTCACAATCATCTCAAACGCCATCCTCATCAAACGAAACCACACCAAACCGGCCAAGCGCCGCCCCCTCTGCAACTCCGTCGCGGTTAGGACTCTATTCACTCACCATTCTCCTCGCTGCTGCTCTCACTACCTTTCTTCCTTAAAATTTAAAATTCCATACATTATTTTTTCTTGTAACTTGAGTTATATATAAATTATAGTCCGTCAACATTGTTTTTTTCTCTAATATTGTTATTTCCACTTAGGAAATCACGTCTGGCAAAATGGTAATTAATTCTCTGTAGTATGATCTTTGTATCTATCACTACCAATGTTATCATCAAATTCTTTGTGCCAACCTAGTTTTGTCATGTTATGTTTTTTTTAGGAGTTTGCCATGGTTTTCTTTCCAAAATCTAGCTAAGAGCAAGTTGTTGCAAACTTGTTTGGTACTTATTAAACTAGTAATCAACACCTAATAATAC 1720 0.4378 MDLPIRVCLLLILLSLFSGTQGYTFYVGGKDGWVLYPSENYNHWAERMRFQVSDTLVFKYNKGSDTVLVVNKDDYEKCNKKNPVKKFEDGDSEFQFDRSGPFYFISGKDDNCEKGQKLIIVVLAVREPPPYYPPNVPYVPTPHHPPYVPSPPKTHSPVYSPPYAPPKPPSPIHYPPYVPTPSPVYSPTTPPKAPSPTTPNFPTPPQTPSPVYSPPNVPTTPPKAPSPGNHPPYVPTTPSPIYTPSPGNQHYVPTPPNTPSPISQPPFVPITPSPFPQPPYVPQPETPSPVSEPPYTHSPTSQPPYMATPPTNPDAPTPTSISPIQEPPSSSISPSLSPSPPPLTPYNTPPSTSPSSSTTSPSPSSVPPATTPSQSSQTPSSSNETTPNRPSAAPSATPSRLGLYSLTILLAAALTTFLP 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g02356 419 FunFam Early nodulin-like protein 1 22 127 - -
Pste3g02356 419 MobiDBLite consensus disorder prediction 183 242 - -
Pste3g02356 419 SUPERFAMILY Cupredoxins 22 123 IPR008972 -
Pste3g02356 419 Gene3D - 22 126 IPR008972 -
Pste3g02356 419 Pfam Plastocyanin-like domain 33 116 IPR003245 GO:0009055
Pste3g02356 419 PANTHER BLUE COPPER PROTEIN 23 207 IPR039391 GO:0009055
Pste3g02356 419 CDD OsENODL1_like 23 123 IPR041846 -
Pste3g02356 419 PRINTS Proline rich extensin signature 149 165 - -
Pste3g02356 419 PRINTS Proline rich extensin signature 128 140 - -
Pste3g02356 419 PRINTS Proline rich extensin signature 187 208 - -
Pste3g02356 419 PRINTS Proline rich extensin signature 172 184 - -
Pste3g02356 419 MobiDBLite consensus disorder prediction 333 349 - -
Pste3g02356 419 ProSiteProfiles Phytocyanin domain profile. 23 124 IPR003245 GO:0009055
Pste3g02356 419 MobiDBLite consensus disorder prediction 249 323 - -
Pste3g02356 419 MobiDBLite consensus disorder prediction 350 401 - -
Pste3g02356 419 MobiDBLite consensus disorder prediction 183 401 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g02356 Pste-Chr3 16727499 16729305 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g02356 7 170 Phytocyanin Superfamily AT5G53870 50.867 1.15e-52 178