Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g02344 ATGGCTAATACCTTACGCGTTCTCCTTGGCGTCACTTCACCATCTTCGTTGCTTGCTACAGCTGAAACACGAGACACGACAGCAACAACAACGATTAGGCGTGTAGCAAGCAACGAAGATGGTGAAGGGACGCCAAGGAGAACGCGTAAGATTTTATTATCTTCTGTATGTATTGATTTGGATGACTTTGTTTTCTTGTTATTTATTCCCATCTGCATGACCATATGCCCCTTGCCTTATCTTTTAGTTGAAATTAGCCTAACTATATACTTTTTTATGCTTTGCTTCAGACTCTACGTGAGGGGAACAATCCTTGGATACAAAAGGTCTAAGTCAAATCAGTACCCAAACACATCCCTCATCCAGATTGAGGGAGTTAACACCAAGGAAGAAGTAGGATGGTATGCTGGTAAGCGAATGGCCTATATCTACAAGGCTAAGGTGAAGAAGAATGGAAGCCATTACCGCTGTATTTGGGGCAAGGTTACAAGGCCTCATGGCAACAGTGGTATTGTTCGGGCAAAATTCAAGTCAAACCTTCCACCCAGATCAATGGGAGCACGTGTAAGAGTATTCATGTACCCAAGTAACATATGAGGTAATCTCCCTTTGTTGATGTTTCTAAATTGGTTCTGTCATTCTATTCCATGTAACGTTCTTTGGAAATCTTTTTTTGTCTTTCAAATTTACTGCCTCATTGGATCCCCAAATTTGTGTCTTAACATACATGTTGATGTTTATTGTTCATTTGTTGTGTACATCATTGCTAATTTGTTTACCTGCTTTTTCTTTTTATAGATTAGTAATGCTACTCTTATCCATATGCCAATGTTATATGGCTACTAATAATGCTAAATGTGGCATGCTTAATCTATGGATTGTATTTTATGCTTTATGAAATTAATAATTAAATATTAATTAGGAATTTTGATTTTTTTTCTTGAAACAGTATGATGGCAACTGGTACTTTAAGAGAAACACTATTTATTGTTTTTGTTAGACCAGAAACTAATTATTTAAATTGTGTATGGCAACTATTTCAAGTTCTTCAATCCTTTGTTTATAATGATCTTTTTTGTGAATTTTCAGAGGAGGCCTATGATTTATACTGTACATTTTCTTATGTTATTCATTAGTTGCCAAATATGCTTTAATAAAAAAGAGAAAAAACGTCTGCAATTTGTACTTGTGGTCAGATGCTTGCTTGTATGGTATCCAGAATGGGATTTGTTCACGACCTTGATGTACCTAATTGTAGTTTTTTATTTTATATATTTCCCCTAATTATCAGTTGGAAATTGTTGCAGATTCAGGTGCTGAAACACCTGTAGAATTCCCAGCTGATTTGTAGGCACAAGGATTTTTGTTTCATCTTCCATAGTTTTGTTGTCATCTATGTCAACTTTTGAGATTTTTTCAATGTTTAGATGTTCATGGGACAGAATGGTTTTCTCCGATTTCGTGGTTATTGTCTATGAAGATTATATTCATTACTATAAGTATGGATTAAGTAACGTTTACAGTTTTCCAGATTATTACGTTTGATAAGTTACCCTAACCATCGTAGAAGTACGTTTCTTTTAT 1584 0.351 MANTLRVLLGVTSPSSLLATAETRDTTATTTIRRVASNEDGEGTPRRTRKILLSSVCIDLDDFVFLLFIPICMTICPLPYLLVEISLTIYFFMLCFRLYVRGTILGYKRSKSNQYPNTSLIQIEGVNTKEEVGWYAGKRMAYIYKAKVKKNGSHYRCIWGKVTRPHGNSGIVRAKFKSNLPPRSMGARVRVFMYPSNI 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g02344 198 FunFam 60S ribosomal protein L35a 94 198 - -
Pste3g02344 198 Hamap 50S ribosomal protein L35Ae [rpl35ae]. 100 192 IPR001780 GO:0003735|GO:0005840|GO:0006412
Pste3g02344 198 ProSitePatterns Ribosomal protein L35Ae signature. 160 181 IPR018266 GO:0003735|GO:0005840|GO:0006412
Pste3g02344 198 Pfam Ribosomal protein L35Ae 98 192 IPR001780 GO:0003735|GO:0005840|GO:0006412
Pste3g02344 198 PANTHER 60S RIBOSOMAL PROTEIN L35A 96 198 IPR001780 GO:0003735|GO:0005840|GO:0006412
Pste3g02344 198 SUPERFAMILY Translation proteins 98 192 IPR009000 -
Pste3g02344 198 Gene3D translation elongation factor selb, chain A, domain 4 95 198 IPR038661 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g02344 Pste-Chr3 16633817 16639478 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g02344 97 198 Cytoplasmic Ribosomal Protein Gene Family AT1G74270 91.176 4.76e-68 202