Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g02330 ATGGCTGATGTGTCAGGTCTACTTGAGGCAACAGGATCAAGATTCAGTTCATTGGAGCTTATTGGGCAGGGATCATTTGGAGACGTCTATAAAGCGTTTGACAGGGAGCTCAACAAAGAAGTTGCCATCAAAGTAATTGACTTGGAAGAATCAGTCTATATGCATTTCTTGTTACTTCCTAATTTGTCTTTCCTTTCTTTGTGCCACTTCAGAGAGGATGAAATTGACGATATCCAGAAGGAAATTTCTGTTCTGTCCCAATGTCGATGTCCATACATTACTGAATATTATGGTTCCTATCTTAACCAAACTAAACTTTGGATAATAATGGAATACATGGCTGGTGGCTCAGTTGCTGATCTACATTTACATGTCAATTATACAGCTGCAAATATTTTATTGACTGAGAACGGTGATGTAAAGGTACATTATATTCTGAAATATGTTGCTGATTTTGGTGTTTCTGCACAATTAACAAGGACTATATCAAGGAGAAAGACATTTGTAGGAACACCGTTCTGGATGGCACCTGAGGTTATTCAGAATACAGATGGATATAATGAGAAGGCAGATATCTGGTCTTTGGGAATCACTGCAATTGAGATGGCAAAGGGGGAGCCTCCACTTGCTGATCTTCATCCAATGAGAGTTCTTTTCATCATACCCCGAGATAGTCCTCCACAGCTAGATGATCATTTTTCTCGTCCAATGAAAGAATTTGTTTCATTATGCTTAAAGAAGGTCCCTGCGGAGGCAAGTAGGTCAAGTGCTAAGGAACTTCTCAAGGACCGTTTTATTCGTAACGCTAGGAGGTGTTCAAAGCTTGCAGAAAGAATAAGAGAGCGTCCAAAGTACCAAATAAAGGAAGAAGATCAAGAGACACCTAGAAATGTCCCAAGGGGAATGGGGGAAGCATCAGATACTGTTAAGGTGGCAAGAGATTTAAGAGCTGAGGAAAATAATCAACCCAGTGATCAGGGTAAAACCCTGAAAAGTGCTGGATGGGACTTCAGCATTGAGGGATCACAGGGTACTGGAACCTTTCGTGGTGGTTCTCGACCACCTCAGTCTAGGGATAAAAAAACTGAAGTTTCACATAATCAGCTTACCCAAAGAAAAGCATCAGAAAGTGGTTATCAAGGGGGATCTGCCAATAGAAGTTCACTTAACGAGTCACTTGAAAGTTCCTTTGGAAGAGATCTTAGAGTTCCTCACCATGATGAGCATTTGGATAATCGCCTTGAAGATGATGAATTATCTGGAAATGGATCAGGAACTGTTGTTATCCGATCTCCAAAGGTATCAAGGTCATCTGGGTTTCGTGATCAGAGCTCTCTGTCTATCAGCAGCTATGCTTCTTTTGAAGATGCTTCTTCAAGTGGAACTGTTGTTTTACGTGGCCAGCATGACGAGTCTGATTCTCCACAGACACCAAGGTCTCGACTGGGACTTCATGACAGAAATTCAAATGCCTCAATGGAAGATAGTGCAGCAAATCTTGCAGAGGCAAAGGCTGCCATCCAAGCAGGGCTGAGGAAAGTGAATCCTCGAGAGAGATTTTCCCGGGGAAAAATCAACAATGATAAACAGGAAATCAAGAGAGATCAAAAGGCTAGCAGCTGTGATTCTTCAAGACCACAAGGTGAATATGCTGCACACAAGGCCATGTTAAGATCACGTCAAGCTAGTGATGATGAAAGTGCTAAAATAATGCCATCATCAGTGCCGTTATCTGCTCTACTTATTCCTTCATTAAAAGAGGCCGTTACTGATGATCCAGAAGGGTCAATCGTACGGGCAGTTATCAATTCTTTGATAAACATGGAGGGCACAAAACCTAAATCCTGTGATGTTCTTGTCAAAAGGTTGCTTCAGCGGTTGGCAAGTTCAAAGGATGATTCATTGAAGGATCTGCAAGGACTAGCAGGCCAATTATTCAGCAAGACAAAGTCCTCTGAAGAAACCCGAAATGCAGAGACTGATAACAGGAAGAAACAACAAAACAAGGAACATAATCCAAATAGCAATTTAAGCCCGCTAGCTAGATTTCTTCTCTCAAGCTTTGCTGACAGATGGCAAGGCCAAACCTCACATGATCTAAACCCATCTTGAGCAAAGTTGGAAGCTACCAATTTCTCTGTTGTCCCTATTTATGCATTTTTTCCGATTAATTGTACATATATTATTGTAAGAAATTGTTTTTCTATATTCTATTAGTATTACTATTAATTTATTATTTTATTTTCAATTTTTTCCTCGTAGTTATAGGGCGACAGCTATACTGTATAATTTATACAGGGTTTTCTAAGTTACATGCAAATTATAACAGACTACATTGATTTGTATTTTCTATTGTCTCTATGCAAATGGAGTAACAAATCAATACACAAATTATCTCTTTTTCGTCATTCTGTATTTTATATGGATTGAAGA 2433 0.3975 MADVSGLLEATGSRFSSLELIGQGSFGDVYKAFDRELNKEVAIKVIDLEESVYMHFLLLPNLSFLSLCHFREDEIDDIQKEISVLSQCRCPYITEYYGSYLNQTKLWIIMEYMAGGSVADLHLHVNYTAANILLTENGDVKVHYILKYVADFGVSAQLTRTISRRKTFVGTPFWMAPEVIQNTDGYNEKADIWSLGITAIEMAKGEPPLADLHPMRVLFIIPRDSPPQLDDHFSRPMKEFVSLCLKKVPAEASRSSAKELLKDRFIRNARRCSKLAERIRERPKYQIKEEDQETPRNVPRGMGEASDTVKVARDLRAEENNQPSDQGKTLKSAGWDFSIEGSQGTGTFRGGSRPPQSRDKKTEVSHNQLTQRKASESGYQGGSANRSSLNESLESSFGRDLRVPHHDEHLDNRLEDDELSGNGSGTVVIRSPKVSRSSGFRDQSSLSISSYASFEDASSSGTVVLRGQHDESDSPQTPRSRLGLHDRNSNASMEDSAANLAEAKAAIQAGLRKVNPRERFSRGKINNDKQEIKRDQKASSCDSSRPQGEYAAHKAMLRSRQASDDESAKIMPSSVPLSALLIPSLKEAVTDDPEGSIVRAVINSLINMEGTKPKSCDVLVKRLLQRLASSKDDSLKDLQGLAGQLFSKTKSSEETRNAETDNRKKQQNKEHNPNSNLSPLARFLLSSFADRWQGQTSHDLNPS 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g02330 703 MobiDBLite consensus disorder prediction 307 321 - -
Pste3g02330 703 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Pste3g02330 703 MobiDBLite consensus disorder prediction 322 352 - -
Pste3g02330 703 PANTHER STERILE20-LIKE KINASE, ISOFORM B-RELATED 128 648 - -
Pste3g02330 703 MobiDBLite consensus disorder prediction 466 496 - -
Pste3g02330 703 Gene3D Phosphorylase Kinase; domain 1 3 112 - -
Pste3g02330 703 ProSiteProfiles Protein kinase domain profile. 15 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g02330 703 Pfam Protein kinase domain 129 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g02330 703 Pfam Protein kinase domain 16 121 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g02330 703 MobiDBLite consensus disorder prediction 646 680 - -
Pste3g02330 703 MobiDBLite consensus disorder prediction 652 670 - -
Pste3g02330 703 MobiDBLite consensus disorder prediction 515 540 - -
Pste3g02330 703 MobiDBLite consensus disorder prediction 283 297 - -
Pste3g02330 703 Gene3D Transferase(Phosphotransferase) domain 1 122 301 - -
Pste3g02330 703 MobiDBLite consensus disorder prediction 368 395 - -
Pste3g02330 703 SUPERFAMILY Protein kinase-like (PK-like) 13 288 IPR011009 -
Pste3g02330 703 MobiDBLite consensus disorder prediction 514 547 - -
Pste3g02330 703 MobiDBLite consensus disorder prediction 398 418 - -
Pste3g02330 703 MobiDBLite consensus disorder prediction 424 442 - -
Pste3g02330 703 MobiDBLite consensus disorder prediction 283 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g02330 Pste-Chr3 16511677 16522539 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g02330 1 700 MAP Kinase Kinase Kinase Kinase AT3G15220 57.745 0.0 748
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-YSK Pste3g02330 Pkinase 2.7e-22 CL0016