Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g02315 CGCGCGTCGAATGAAGGATACAAAAATATCAGACAAAAAACCCTCTTAATTTTTCACTCTCACACGCCCTAGTCTCTCTGTGCAGAGAAGACCAATTTCAGAGAAGAAAGCACGGAAAAACGAAGGGTGTCCGGAACCCCAGAATACAGAAACCCAATCTTCACTAAAAAATGAAGAACACCCTTTAATCCAACCTAGGCCCCATCGAAGAAGATGCGTCACTAATTCGATTTCTAGGGTTTCGGTTTCTTTTTCACCTTGGACCAACGGCGGGAACGCCGCAACGGCGACGTTTTTCTTCCCAATCGTCGCACATTCGAACACCCAATTGGACGGAGAACACAATCGACGAATGCCCATTTGCTAGTTCTGGAGAGACCCAAAAAAGTTTTTCGATTTTCATTTTTCAATCTTTGCATTTTTCATCGTTTTTTCTTTTTTTCTATTTTGCCGTGTGGTGATTTCTGGGGCTTTCTGGTCATGCGATCATCACTGTCTTCATTGGGTTCGTCGTCTCGATCGGGTTCGAGGATCCGTAAGAAGCACAAGAGGTTGGATGCAATATGTGAGGAAGAGTATACCCGAAACCATGGTGAGTTGAATGAGGATAATGGTAACGTGAACCGTGATGCAGGGATTCGTCGGAGCTCCCGGGTTCGCCGTGCCCCGGTGCTGCTTGACGCTTCTCCTTCGCCGCCGAAGAAACGGCGGAAGGGGGGGATTGGTGGTGAGGTGGATGGCGCCAAGAGTTTAGAGCGGGAAAAGAGTGGTTCTGGCGGGGCGTGGAGTTGTAGGTTGCGGTCAAGGGTTGGTATTAGGGTGAAGGAGGAAAGGGAATCGCCGCGTGGGAAGAGGAAGCTTTTTGAGGGTTTGATTGGAAGGAGGGTTGGTAGGAAGGAGGAGTTGGAAGGTCTATTGCCCAAAGTTGTTAAGTCGAAGAGGCCAGGGAGGATTAAAGCCACAAAGCATGAGGAAGGGAATGAAGAGGATGTGTCTCATGGGAGTTTGGAGGAGAGTAAGAGTCAGGATTTGGAGATTGTGTTGAGCAGTGGTGAGGAGAGTGATTCTGATGCTGAAACCGAATTGTCCACCGAGGTTCCCATGGACGATTCTGATGGAAGTGCCTCTCCTGTGTTAGGGTTTGAGGAGGGAAATCAGATGGTTGGAGATGTCACTCCTATGGTTGGGAATGAGGAGGGGAATCAGATTTGTGATTTGGATGGAAATGTACCTCCTATGGCAGTTGAAGAGAAGAACTTCTCCGATGATTTGCAAACTGAGGAGTGTGGTGGTGACACTGAACAGTTTCCAGTGGAACATGTAGATAAAGTGGATGATCAGTTAGAGAGTGTGAAGGAAAGCAAAAATGTAGCTGATGTGACTGAACAGGTAGACAATGAAGATTCTGGTGGTAAGGAGGCTGACATTGATGAAAATGTCTTGAAACAAGCAAATGTTGGGAGGACAGACGAATTGAAACATGCTTCAATTGACAAGTGTGGTCACCAGCGCATCAAAGAGGGCAGGCGGTGTGGTCTGTGTGGTGGAGGGGGTGATGGTAAGCCTCCAAAAAGATTAGCTCAGGATAATGGTGAAAGTGAAAATGAAGCTTATAGTGGGTCCTCATCTTCAGAGGAGACTAATTATGATATCTGGGATGGTTTTGATGATGAACCTGGTTGGCTTGGGCGTCTCTTGGGTCCTATTAACGATCACTATGGTATTGCTAGAATATGGGTTCATCTGCACTGTGCCGTATGGAGTCCAGAGGTTTATTTTGCTAACTTTGGATGCTTAAAAAATGTGAGAGCTGCACTTTTCCGAGGAAGAGCACTGAAGTGCACACGCTGTGGGAGGCGAGGGGCAACTACTGGTTGTCGAGTTGATCGTTGTCCAAAAACTTATCACTTGCCTTGTGCAAGAGCAAGTGGTTGTATATTTGATCACCGTAAATTTCTTATAGCTTGCACAGATCATCGACATCTCTTCCAACCTCGTGGTAATAAATATTTAGCCCGGATAAAGAAGTTAAAGGCTAGGAAAATGATGTGGGAGATAAGGAAGCGATCAAATGAAGCTTGCAGAAAAGATATTGGAGATGAAGAGAGATGGTTGGAAAATTGTGGAGAGGATGAAGAATTTTTGAAACGCGAGAACAAGAGGCTTCATCGTGATTTATTGAGAATATCCCCAGTGTACATTGGGGGTTCAGAATCTGCCAATGAAAATTCATTTCAGGGATGGGAATCTGTTGCTGGGCTTAAAGATGTCATCCGTTGTATGAAAGAAGTTGTTATCTTACCTCTGCTATATCCGGAGCTCTTTGATAATTTAGGGCTCACACCTCCAAGAGGTGTTCTTTTGCATGGACATCCTGGAACTGGGAAAACCTTAGTGGTCCGGGCATTGATAGGTGCATGTGCTCGTGGTGATAAGCGGATTGCCTATTTTGCCCGCAAAGGTGCAGATTGCTTGGGGAAATATGTTGGTGATGCCGAGCGTCAACTAAGACTGTTATTCCAGGTTGCTGAGAAATGTCAACCTTCTATAATATTCTTTGATGAAATAGATGGGCTGGCACCCCGCCGTACCAGGCAACAAGATCAGACACATAGTTCTGTTGTATCAACATTGCTTGCTCTTATGGATGGTTTGAAATCTAGGGGCTCCGTTGTGGTCATAGGAGCAACAAATCGTCCTGAAGCTGTTGACCCAGCTCTAAGGCGCCCTGGTAGATTTGATCGGGAAATTTACTTTCCATTACCATCAATTGAGGACAGAGCTTCCATTCTCTCACTTCACACCCAGAATTGGCCAAAACCAATCACTGGATCCTTGCTTGAGTGGATTGCAAGAAAAACGCCTGGCTTTGCTGGTGCTGATCTCCAGGCTCTTTGTACCCAAGCAGCGATCAATGCATTGAAGAGGAATTTCCCTTTGCATGAAGTCCTGTCTTTGGCTGCCGAAGAAAAACATTCTGGCTCCAAGCCTGTTCCTCTTCCATCCTTTGCAGTGGAGGAGAGGGATTGGTTAGAGGCTTTTTTTTCTTCCCCACTACCTTGCTCCCGGAGAGATGCTGGAAATGCTGCCAATGATGTAGTATGCTCCCCTCTTCCCAACCAACTTATTCCTTGTTTATTGCAGCCATTATGCACCCTTCTTGTATCTCTTTATCTTGACGAACGACTATGGTTACCACTTCCCATATCTAAAGCTGTAAGTGTGATAAAGGATGTCATGGTTTCTGCTCTAGACAAAAAGCAAAAGCCTTTTGATCGCTGGTGGTTGCACATGAATGATTTTCTGCAAGAAACAAATATTGTTTATGAGTTAAAGAGAAAGCTTACTAATTCTGGGATTTTTTCGGCTGACAATGGAATTGCTGGTTCTTATGATACTCTGGATGATGCCAATAATAACAACTGGAAGTTAGAATCCTCCACAAGGAACCATCTTGGCATGCGTAGTGGTTTATTTGCACTGACAAACAAACTAGGATTTCGGATATTGATTTCTGGAAGTTCACGATCTGGCCAGAAACATTTTGCTTCTTGCCTTCTTCACTGCTTTATTGGGAATATTGAAATACAGAAGATTGACATGGCTACTATTTTACAAGAAGGACATGGAGAAGTGGTTCAAGGGATTGCTGAGATACTAATGAAATGTGCTAGCAGGCAATCTTGCATAGTATTCTTGCCAAGAATTGATTTATGGGCTGTGGAGAAACATTTCCAAATTTCTGAAAGGACTGATTCATGTTTAATGGTCGGCAAATCTTGTTTCACACCAACCAAAGTTGTTGAGAAGGAAAATGACATCGGTACTGAGAAAAACTCAACTGAGATGGACAAAGGCCAAGCCAACATAAAAGCTTCATATGCCTGGATGTCATTTATTGAGCAGGTGGAATCCATTGGTGTATCCACATCCTTGATGATTCTGGCTACGTCAGAAGTTCCCTATGCTGAACTTCCGCGCAAAGTAAGAGAATTCTTCAAGAGTTACAAATCTAAAGACAGCCAGGCAACTCCTTTGGAGCAGACAGTTCCTCGTTTCTCTCTGCAGATTGATGGGAATTTTGATCATGACATGTTGATAAATCTATCTGCACAAGAGCTATTGAGAAATGTAGTCGAGCAGCTGGTTCAATTAATTCATCAGAGATCTCATGTTCATATGGATGCCCAAAAGCGCGACAGAATCTATGAATCAATTGAAGTCTGTAAAGATAAGGTATGTCAAAGAAAAGAAGATGGATCAGCCAATGATAAGAATAGTGATATCCAACTTGATTCCTTTACAAAAGTTCCACCAACACCCAACAGCAAGTCACTGAAAGGAAAATCAACCTTGTTGTTGGCAATATCGACATTTGGCTATCAAATTCTTTTATACCCACATTTTGCTGAACTTTGTTGGGTCACTTCAAAGCTTGACAAAGGTCCTTGTGCTGATGTAAGTGGACCCTGGAGGGGCTGGCCTTTCAATTCCTGTATAACTCGTCCTATTAATTCACATGACAAGGTGGCAGTTTCTTGTAGTTCTGGTGGCATTAAAAGCAGAGAAGCATCTGGTTTAGTCAGGGGCTTGATTGCTGTTGGTTTATCAGCTTACAGAGGTGTGTATACATCAGTTAGGGAAGTTTCCCTTGATGTAAGGAAGGTTCTCGAAATCTTAATTGAGAAAATCAATATAAAAGTTCAATCTGGGAAAGATAAATATCAATATTTTCGTATTTTGTCGCAAGTGGCTTATTTAGAAGATATGGTCGACAACTGGGCTTATACATTGCTAAGTCTGGAGCAGGATTCCCCTGAGCAAAAAGCAAATGTTATACCAGCAAGTGGTGGGTCATTAAACAGTAATCTCACACGTGAAAATCACCAAACTGAAGGTGAAGACTGCCATTTGGTTGTTCCTGTGGATGGTCATGATTTGGAGACAACAGTGGAGGGAAGTCACAAGGAAATTCCTGCTGAAACAACTGGATGTCTTGACTCTAATGACAAAACTGATATTTTAGACATGATGGATTGTGATGATGGAAATGCTAGTTCTGAAGGATCTCTCCCGAACCATTCTTTTTCAGATAAGAACATTGACAACTCTGCTGCTGTAAACCAACCACTTTATCTATCCACAAGTCCGGAGAATGGAACATTATGTACACAATCTGAATCTCTCCATGCTGTAAATAATGAAGTGGTGGGTGGAGAACTAGGGATCTTCAAAGACTTTAACAAGTTGATGTGCACTCGCCCTGTGGTCCCTTCTGAAAATGGACTTCTCACTGCTCGTGAACTGGAGGAGATGCAGAATATCGAGATTGGTAACTTAAAGACTGTCTCTGATCAGCCTCTTAGCTTGTCCTCAGCAGAGACTGGTACTAAATCAAGTGATGGCAATTCTGATAAACACGAGAATGCTATGGATAATAATGTCTCTTCAAGTGATAACAGTGGCCCTGCAGAATCTGGGGTTATTTGCTTGTATCAATGTTGCCCTGCATGTCTCCACAGTCTCCATCATTTGACAAAGAAAATACTTGTTGAAAATTGGGGTTTAAACAGTGATCAGTGGACAGCAGAAGACGTCCATGATGTTGTTGCATCATTATCTGTAGATCTTATTTCAACTGTTAGGAAATGCTTTATGCCTCAAGATTTCATTGATTCATCAAATAAAACCTCAAGAAACGAAAAGCATGGAAAATCTCTTGATTGTCTGAGCATGAGAACGTGTAATGCTGGAAACCAAGGCAAGGATGTTGTGTCAGCTGAATGTGTTTCTCACTCAGCAAGCCAACATGTGACTGCTATGGAAGATATGGTACTGAGTGAAGAATCATCAAACCATGATCTTAAATTTGTTTTCAGAGATGGTGTACTAGTTCATATGGACCCGGACAAGGATGTCTCAGTTCACTGTAAATTTGACAACTTGTGCCTTTGTTCTCTAAGAGAGTTGATAGTAATGACAAAGCGCCCTTTTGATTAGGCTATTGTTTCGTAGCTTTGATTTGCTTAGCAATTTTTTATGCTGATGCGGCATTTGTATATAGCTTTTGAGATTGAAATATAGTTTTGACCAGGA 6096 0.4298 MRSSLSSLGSSSRSGSRIRKKHKRLDAICEEEYTRNHGELNEDNGNVNRDAGIRRSSRVRRAPVLLDASPSPPKKRRKGGIGGEVDGAKSLEREKSGSGGAWSCRLRSRVGIRVKEERESPRGKRKLFEGLIGRRVGRKEELEGLLPKVVKSKRPGRIKATKHEEGNEEDVSHGSLEESKSQDLEIVLSSGEESDSDAETELSTEVPMDDSDGSASPVLGFEEGNQMVGDVTPMVGNEEGNQICDLDGNVPPMAVEEKNFSDDLQTEECGGDTEQFPVEHVDKVDDQLESVKESKNVADVTEQVDNEDSGGKEADIDENVLKQANVGRTDELKHASIDKCGHQRIKEGRRCGLCGGGGDGKPPKRLAQDNGESENEAYSGSSSSEETNYDIWDGFDDEPGWLGRLLGPINDHYGIARIWVHLHCAVWSPEVYFANFGCLKNVRAALFRGRALKCTRCGRRGATTGCRVDRCPKTYHLPCARASGCIFDHRKFLIACTDHRHLFQPRGNKYLARIKKLKARKMMWEIRKRSNEACRKDIGDEERWLENCGEDEEFLKRENKRLHRDLLRISPVYIGGSESANENSFQGWESVAGLKDVIRCMKEVVILPLLYPELFDNLGLTPPRGVLLHGHPGTGKTLVVRALIGACARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPRRTRQQDQTHSSVVSTLLALMDGLKSRGSVVVIGATNRPEAVDPALRRPGRFDREIYFPLPSIEDRASILSLHTQNWPKPITGSLLEWIARKTPGFAGADLQALCTQAAINALKRNFPLHEVLSLAAEEKHSGSKPVPLPSFAVEERDWLEAFFSSPLPCSRRDAGNAANDVVCSPLPNQLIPCLLQPLCTLLVSLYLDERLWLPLPISKAVSVIKDVMVSALDKKQKPFDRWWLHMNDFLQETNIVYELKRKLTNSGIFSADNGIAGSYDTLDDANNNNWKLESSTRNHLGMRSGLFALTNKLGFRILISGSSRSGQKHFASCLLHCFIGNIEIQKIDMATILQEGHGEVVQGIAEILMKCASRQSCIVFLPRIDLWAVEKHFQISERTDSCLMVGKSCFTPTKVVEKENDIGTEKNSTEMDKGQANIKASYAWMSFIEQVESIGVSTSLMILATSEVPYAELPRKVREFFKSYKSKDSQATPLEQTVPRFSLQIDGNFDHDMLINLSAQELLRNVVEQLVQLIHQRSHVHMDAQKRDRIYESIEVCKDKVCQRKEDGSANDKNSDIQLDSFTKVPPTPNSKSLKGKSTLLLAISTFGYQILLYPHFAELCWVTSKLDKGPCADVSGPWRGWPFNSCITRPINSHDKVAVSCSSGGIKSREASGLVRGLIAVGLSAYRGVYTSVREVSLDVRKVLEILIEKINIKVQSGKDKYQYFRILSQVAYLEDMVDNWAYTLLSLEQDSPEQKANVIPASGGSLNSNLTRENHQTEGEDCHLVVPVDGHDLETTVEGSHKEIPAETTGCLDSNDKTDILDMMDCDDGNASSEGSLPNHSFSDKNIDNSAAVNQPLYLSTSPENGTLCTQSESLHAVNNEVVGGELGIFKDFNKLMCTRPVVPSENGLLTARELEEMQNIEIGNLKTVSDQPLSLSSAETGTKSSDGNSDKHENAMDNNVSSSDNSGPAESGVICLYQCCPACLHSLHHLTKKILVENWGLNSDQWTAEDVHDVVASLSVDLISTVRKCFMPQDFIDSSNKTSRNEKHGKSLDCLSMRTCNAGNQGKDVVSAECVSHSASQHVTAMEDMVLSEESSNHDLKFVFRDGVLVHMDPDKDVSVHCKFDNLCLCSLRELIVMTKRPFD 1839
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g02315 1839 Pfam PHD-like zinc-binding domain 421 500 - -
Pste3g02315 1839 Gene3D - 762 830 - -
Pste3g02315 1839 PANTHER AAA DOMAIN-CONTAINING 15 1736 IPR045199 -
Pste3g02315 1839 MobiDBLite consensus disorder prediction 1257 1286 - -
Pste3g02315 1839 MobiDBLite consensus disorder prediction 357 386 - -
Pste3g02315 1839 SMART AAA_5 622 763 IPR003593 GO:0016887
Pste3g02315 1839 ProSiteProfiles Extended PHD (ePHD) domain profile. 388 500 IPR034732 -
Pste3g02315 1839 MobiDBLite consensus disorder prediction 71 93 - -
Pste3g02315 1839 FunFam ATPase family, AAA domain-containing 2 585 768 - -
Pste3g02315 1839 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 396 502 IPR013083 -
Pste3g02315 1839 Gene3D - 587 761 IPR027417 -
Pste3g02315 1839 MobiDBLite consensus disorder prediction 23 44 - -
Pste3g02315 1839 MobiDBLite consensus disorder prediction 1 102 - -
Pste3g02315 1839 MobiDBLite consensus disorder prediction 143 252 - -
Pste3g02315 1839 MobiDBLite consensus disorder prediction 1517 1541 - -
Pste3g02315 1839 MobiDBLite consensus disorder prediction 1266 1286 - -
Pste3g02315 1839 MobiDBLite consensus disorder prediction 190 206 - -
Pste3g02315 1839 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 588 819 IPR027417 -
Pste3g02315 1839 MobiDBLite consensus disorder prediction 158 180 - -
Pste3g02315 1839 MobiDBLite consensus disorder prediction 290 314 - -
Pste3g02315 1839 FunFam p-loop containing nucleoside triphosphate hydrolase superfamily protein 762 855 - -
Pste3g02315 1839 MobiDBLite consensus disorder prediction 372 386 - -
Pste3g02315 1839 ProSitePatterns AAA-protein family signature. 731 749 IPR003960 GO:0005524|GO:0016887
Pste3g02315 1839 MobiDBLite consensus disorder prediction 1626 1660 - -
Pste3g02315 1839 FunFam P-loop containing nucleoside triphosphate hydrolases superfamily protein 346 502 - -
Pste3g02315 1839 Pfam AAA+ lid domain 787 819 IPR041569 -
Pste3g02315 1839 MobiDBLite consensus disorder prediction 1526 1541 - -
Pste3g02315 1839 Pfam ATPase family associated with various cellular activities (AAA) 626 761 IPR003959 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g02315 Pste-Chr3 16370776 16378407 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g02315 588 823 Calmodulin-binding Proteins AT3G56690 40.336 9.14e-44 172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g02315 3 16370776 16378407 Pste3g02315 3 16370776 16378407 ECH