Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g02304 GGCTGTTCATCACACTCTCCAGAGCCAGACAGAGTGCAGCGTTGCTTTGCTGTGCCCTGTGGTGGAGATTCATTCTAGAGAGAGAGAGAGAAACACTTTTTCCACACCTTCTCTCTCTAAGATGGCCGAGGATCCAATGCCCACGCGCTGGTCTTTCCAGGACTTCAAATTGTATTATGATGCTAAGTTTGGAAGGAAGAAAGTTGAGGAGAATGGCAAGACTGGTGATAAAGTTGTCACTGACGGTGTTGTGTCCAATGGCAATTCGCATTCCAAGAGGCCATTGGAAATGGCTGTTTATGAGCAGTTTCGAAGAGAGGAGCAGAATCAGATTCATGCAAATGGTTTTTCGCCAGTCAATATGGATGAAAAGCCGCAGAAATCTTTGCTTCCACCTTTTGAATCTGCAGATATGCGAACTTTAGCAGAGAGCCTAAGTAGGGATATTATTCGTGGAAGTCCAGATGTGAAGTGGGAAAGCATCAAGGGGTTAGAGAATGCCAAACGTTTGCTGAAAGAGGCTGTTGTGATGCCAATTAAGTATCCCAAGTACTTCACTGGTCTGTTAACACCATGGAAGGGCATCCTCCTTTTTGGCCCACCAGGGACAGGAAAGACAATGCTCGCAAAGGCAGTTGCAACAGAGTGCAAGACTACTTTTTTTAATATTTCAGCCTCATCTGTTGTCAGCAAATGGCGAGGTGATTCAGAGAAGCTAGTGAAAGTGTTATTTGAACTTGCAAGGCATCATGCGCCCTCAACAATATTTCTTGATGAAATTGATGCTATCATTAGTCAGCGTGGTGAAGCTCGCAGTGAACACGAAGCAAGTAGACGGTTGAAAACTGAGCTTCTCATTCAGATGGATGGTTTGACACGGACAGATGAACTGGTTTTTGTTTTAGCGGCTACAAATCTTCCTTGGGAATTGGATGCAGCCATGCTCAGACGTCTTGAGAAGCGAATCCTTGTACCCCTTCCAGAACCAGTAGCGAGAAGAGCTATGTTTGAGGAGCTCCTTCCTCAACAATCTGACGAAGAGCCAATCCCCTACGATATACTGGTGGATAAGACGGAAGGATATTCAGGGTCAGATATCCGATTACTCTGTAAAGAGACAGCAATGCAGCCCTTAAGACGCTTAATGTCACAACTTGAGCAGAGACAAGATGTGGTGCCTGAAGAAGAGTTGCCAATAGTTGGGCCAATAAGATCTGAAGATATAGAGACAGCTTTAAGAAACACAAGGCCTTCTGCTCATCTGCATGCCCACAAATATGACAAGTTCAATGCTGATTATGGTAGTCAAATACTACAATGAAATGTTGTACTTGTTATTCATAGGTTGTCCACAATTTCATTGTCATAAAATTACCCTTGTAAGGCTAGTAAATGTAAAACATTATTTCGGTGCCACTTTATTTCGTGATATGCAACATTCTTTTTATTAGTAGCAACTAATTTTACATATCTAAGTAACGAATGCTTGTGATTATATTTTTAAATTCACTCTATTTGATTTTACTTAAGA 1531 0.4233 MAEDPMPTRWSFQDFKLYYDAKFGRKKVEENGKTGDKVVTDGVVSNGNSHSKRPLEMAVYEQFRREEQNQIHANGFSPVNMDEKPQKSLLPPFESADMRTLAESLSRDIIRGSPDVKWESIKGLENAKRLLKEAVVMPIKYPKYFTGLLTPWKGILLFGPPGTGKTMLAKAVATECKTTFFNISASSVVSKWRGDSEKLVKVLFELARHHAPSTIFLDEIDAIISQRGEARSEHEASRRLKTELLIQMDGLTRTDELVFVLAATNLPWELDAAMLRRLEKRILVPLPEPVARRAMFEELLPQQSDEEPIPYDILVDKTEGYSGSDIRLLCKETAMQPLRRLMSQLEQRQDVVPEEELPIVGPIRSEDIETALRNTRPSAHLHAHKYDKFNADYGSQILQ 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g02304 399 PANTHER AAA DOMAIN-CONTAINING 61 395 - -
Pste3g02304 399 SMART AAA_5 151 288 IPR003593 GO:0016887
Pste3g02304 399 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 114 379 IPR027417 -
Pste3g02304 399 Gene3D - 287 375 - -
Pste3g02304 399 FunFam Katanin p60 ATPase-containing subunit A-like 2 287 375 - -
Pste3g02304 399 Pfam ATPase family associated with various cellular activities (AAA) 155 285 IPR003959 GO:0005524|GO:0016887
Pste3g02304 399 Gene3D - 114 389 IPR027417 -
Pste3g02304 399 CDD RecA-like_VPS4-like 121 284 - -
Pste3g02304 399 Pfam AAA+ lid domain 314 347 IPR041569 -
Pste3g02304 399 FunFam Katanin p60 ATPase-containing subunit A-like 2 114 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g02304 Pste-Chr3 16284986 16291975 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g02304 149 359 Calmodulin-binding Proteins AT3G56690 36.449 1.33e-32 128