Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g02301 GTAATGGCACAGTTACCTCCAAAAATACCAACCATACCCCAAAATTGGTCTTCTTTTCCTCATCAAAGGGTTACCACAATGGCCAACTACAACCCCACAACCTCAAGCACTGCTACTCCCCCACCGCCATCATGGGTAGACGAGTTTCTCGACTTCTCCTCAGCCCGCCGAGGGGCTCACCGGAGATCCGCCAGCGACTCCATTGCATTCCTGGAGACACCGTTTCTCGAGGAATGCCGAGCCGGATTCGACCGCCTCGACGAGGACCAGCTCATTTCCATGTTCTCCGACGACATTGCTGCCGCCGCATTGCCTCCTCCGCCTTTGTCCTCCGCTTCCAACCCCTCCTCTCCCTCCTCCGACCAGAATAGCAACAACGACGACAAGCCCACGGCAATGGTCTTGGACGTCAAGCCCAAGACAGAATCCCTCGAAGAGGAAAGCTCCTACAAAATAATGACCCGCCGCCGCCGCCACCCGCCTCCACCGCCACCTGCACTGAAACCGTTGTTGATCCCAAGAGGAATTTTGGCCAACAGGCAATCAGCTCAGAGGTCAAGGGTGAGAAAGCTACAATACATCTCTGAGCTTGAAAGGAGCGTAACAACTTTGCAGACGGAGGTATCAGCATTGTCACCGCGAGTTGCATTTCTGGACCATCAACGTTTGATTCTTAATGTCGACAATAGTGCCTTGAAGCAACGAATTGCTGCTTTGGCCCAAGACAAGATTTTCAAAGATGCTCACCAAGAAGCATTAAAGAAGGAAATAGAGAGGCTAAGACAAATATATCACCAGCAGAATCTACAAAAGATGAGCAACAATCTTCAAACCCCACCAACAACACAGCCAATGCAACTTCAGCAGCAGCAGATAACAGTGTCTCAACCTTCGGGATGCAAGGACAATATAAAGGAGCAGCTCCTCAGTTGAGGGGGAAGAGACAAGGAACAGTGCTGTGGATGAATGTCCCTTCATGCTAACTAGAACTTTCACGTGATGTGTTCCCCATCCATGTTGGTGTGGGGCTTCTTTACACAGTGATGGGGTTGGAGGGTAGGAACTTGACAAGTGGATTGCTTGAATAGGTTGAAGAATTTTATGCTTTCAAGGTTAATTGGTTATCTTGGGGGTTGGATTGGAATTTTCGGATTTGGATTTCTTAAGATTACACTTTTGGTTTTTCTTTTTTTAACAGAAAATTATTCTCAATCATTTTTTATTTTGTTGGGTGGAATAAGGGGACAAAGCATCGTGGTTTTGTATTGGGATATGCATGGGAGCTGTCAGAGAATTATTTTTTCTCCTTTTTTTTTTGTTTGGAGGAAGGGGGTGTCTGATCGCAGTATTTTTCTTCCTTGGGACTAATTGTTTGCTGTCTTGTATTTATTTTTCATATTTTATTTCCATGAATTGTACAAAATTTTAAGCCAACTATAATATTTATTCTTCTGCATCGGATGTGTG 1467 0.4594 VMAQLPPKIPTIPQNWSSFPHQRVTTMANYNPTTSSTATPPPPSWVDEFLDFSSARRGAHRRSASDSIAFLETPFLEECRAGFDRLDEDQLISMFSDDIAAAALPPPPLSSASNPSSPSSDQNSNNDDKPTAMVLDVKPKTESLEEESSYKIMTRRRRHPPPPPPALKPLLIPRGILANRQSAQRSRVRKLQYISELERSVTTLQTEVSALSPRVAFLDHQRLILNVDNSALKQRIAALAQDKIFKDAHQEALKKEIERLRQIYHQQNLQKMSNNLQTPPTTQPMQLQQQQITVSQPSGCKDNIKEQLLS 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g02301 310 Coils Coil 250 270 - -
Pste3g02301 310 FunFam Transcription factor VIP1 171 241 - -
Pste3g02301 310 SMART brlzneu 168 231 IPR004827 GO:0003700|GO:0006355
Pste3g02301 310 CDD bZIP_plant_RF2 174 222 IPR044759 GO:0003700|GO:0006355
Pste3g02301 310 Gene3D - 177 229 - -
Pste3g02301 310 PANTHER BASIC LEUCINE ZIPPER 34 2 290 - -
Pste3g02301 310 MobiDBLite consensus disorder prediction 114 130 - -
Pste3g02301 310 MobiDBLite consensus disorder prediction 102 170 - -
Pste3g02301 310 MobiDBLite consensus disorder prediction 133 154 - -
Pste3g02301 310 SUPERFAMILY Leucine zipper domain 176 223 IPR046347 GO:0003700|GO:0006355
Pste3g02301 310 Pfam bZIP transcription factor 178 215 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g02301 Pste-Chr3 16262916 16266130 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g02301 2 249 bZIP Transcription Factor Family AT3G58120 48.592 6.39e-69 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pste3g02301 bZIP_1 7.2e-08 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g02301 3 16262916 16266130 Pste3g02301 3 16262916 16266130 ECH