Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g02286 TGTAAGTAGTCCATGACATAGATACAACATTCACATGGTAGATGCTCCTAGAGAGAGAAGGATTCATATTTTAGAGAGAGAAAGCCTGTGTTGCTTTCTATTTACCATCTGTTGCAGTGTGGTAGCACTGTTGGGTTTCCCAATCTCTTTTATCTCTGGTGGGGTTGAAGGTGAGGAATGAAGTCAAGCAAGATTGCAATTGGTGCAGAAATTTTTAATTGCTTTTGCGATTCTGTGGAACCCTAATTTTGGAGTGAGGTTGTGCCGTTCTGATTCTAAAGCCCTATTTGTATAAATTAGGGCCAGCAGTGATGAAGTTTGTCAATCAGTAATATATGGCTGAAGAAATGCTTTCTTCATAATTTGGTTTACTATATCGCAAAGTATCTTTTTGTAATGGTGTCAACATGTAGACCAACTGTAGAAATCGTATTGTGAACCTGCACTTGTCTGCAGATATGTTGATCAGAAATGAAATAGAGGATTTGTGTTGTGATAACTTTGAAGGATCTAACGAAGAAAGACAGATTTTTTCAGAGGTCTTTTCTGGTAATGGCATTTTTCAGTCTAGTGAGAAGTGTCTTGTTCCTGGAAGCTTTGAACATGAATCTGCTAGAAACACATTTAAATCATTCTGCTCTAGTAATGAAAATTCAGTTGTATTGCATCCCTCGTCTTCTAGACTTACACAGCCTGAAGATGACTTTAATGTAATTCAACATTCCAAAGAGCCTGCTGTTGGGTGTGTGCCAGACGGTTTCATTTGTGAAGACCAGAATGACGAGGATGTGAATGTTAAACGAATGAAATTTTCTCTGCACGAACTTGCTTGTAGTAGATCTGATTCAGAAAAAAAATTATGTTCATCACAACTTTCAAAAGTAGTAGTTTCCAACCTGTCTCATGCTACTATTGCCTATGATAGTGAACCAATTGCATTTCATTTAGTTGAATCATCGAAGCATGGTGTGATATCTAGTTGTTATCTATTGAACCATAACAAGTTAAATAAACAAGCTGCTAAGGCTGATGTAGATGTTACAAATTTTAATTCAACAGCAGCAGATGGAAATATTGCAAAAGAGGTGTCTGTAAGTAAAGCAGCTGCTTCTCCTGTTTCCCAAGAAAGCTTTGCTAACAGGCTTGTAGTTACAAGTCCGTCAATCACCATTGTGAAAAAGTCTGGGTCTCCTTTAAATCCTGATGAAATGCCAGAATCTTCTAATGTGGACATCTCAAATTCATCCTCAATGCTGGAGGAAGAGGACCCTCGAACTATACTGCAGTTTCATATTCTGCAGTTGCTTAGGATGGCAGGATGGTCTATTGAGAAGCGACAACGGCCTAGTAGGCGTTACCCTGAGTCAGTTTATAGGACACCAGAGGGAAAGCCTATTCGGGAGTTTACAAAAGCTTGGAGATTATGTGGTGAACTATTGTCTGCTGAAAAATGCAATTTAATGTGCAGAGATTATAAGGAATGGACTGATATTAGTCAATTCTGGTCTGATCTATCCTGTGCACTGATCAATGTTGAAAAAACAAAGATGAAGTCAGAAGATCTTTCTGCTATATTGGCATATCGGTGGTGGCTTTTGGATCCTTTTGTAGTAGTTATATTTGTTGATAGAAAGATTGGTGCATTGAAAAAGGGAGAGATAGTGAAAGCAACTCGGAGTTTAGTTTCTAGTAAGTATAAGGTGGCATGTGCTCTCATTGATTCAAGCTCTGGAAATTCAAATCAGGTACCTGGAGGGTCTACTGTAAATGCCGTTCATCATGCCAAAATTAGGAAGTCCAGAGGTGTTGATAATCAGTGTTCAGAAAACTATGGGGAAACAAATAAAATTATTGATGGGGATGTGCCTGTGGGAATGTCAGAAGAAAATAATGCATCTGGTTTGAGCCATGACCTGGATCATTCTCATGACTCAAGGGCTATGCAACAGTCTGAATGTAGCGAGGAAGAGGATGGCAAAATCTCAGTAAATTCTGTATTTGGGAAAGATAACAAATATTCTGCTTCCAATGTTATTCTTAAAAAGAAAATGCGGAGGAAGTGCAAAAGGGTATCTGAAATAAAACTGAGTATGCTCTACCACGGTGACAGGTTGGGCTCAACTGTTACTGACCAGGTGCAGTTACTAGATGGTGAAGCAAGTGGGTTGGGAGAGGTCCAGGATTATCTAGTGGACACTGCAGGAAAGAAAAGAAACTGCAGAAAGTTATCATCTGCCTGTGCAATTCAAAGAAATATTAGGAAAACAAACTGCTCCATAGCTGGAACAGATAAGTCTAACAGATGCCGGATTAAAGACGATGATTTATTGGTGTCTGCAATATTCAGGAATAAGGACTTTAGCACAAAGGCAATCTGGGGCAATTCTAATGGTAAATCCTGCAATTCAAGGGGTCAGAGAAAGCTTAAAAGCCAAAAGGGCCGCTGCAGGTTGCTACCGAGGAATCCCTGTAATGGAGGGAAGCACAACAAGGACAATAGGTTTTATTTGGGTACGAGGACAATTTTATCCTGGTTGATTGATAATGGGGTCTTATCTTTAAATGATGTGATTCAATACCGAAATCCCAAGGATAATGTTGTCATTAAGGATGGTAGGATAACCAAAGATGGTATTATTTGCACATGTTGTGGTAAGGTGCTTGCATTATCAGAATTCAAGTTTCATGCTGGGTTTACACTGAATCGCCCCTGCTTGAATATTTTCATGGAGTCTGGTGAGCCGTTTACACTGTGCCTCCTTCAAGCTTGGTCAGCTGAATACAAAGCCAGGAAAAGCCAGAATCTAGCCGGACATGCTGATGATAATGATAAAAATGATGATTCATGCGGGTTGTGTGGTGAGGGGGGTGAGCTGATATGTTGTGATAACTGTCCATCTACTTTCCACCTAGCTTGTTTGTCCACTCAGGAGATCCCAGAGGGTGACTGGTACTGCACAAACTGTACTTGTAGGATATGTGGAAATCTGGTCATCGATAAAGATATTTCAGATGCGCATGATTCATTACAATGTTCACAGTGCGAGCATAAATATCATGAGAAATGCCTGAAAGATAGAGATAAACAAGAAGGAGCAGTTTCAGACACTTGGTTTTGTGGTCAGAGTTGTCAGGAGGTGTACTCTGGACTCCAGTCTCTGGTGGGGTTAGTTAATCAAGTTGATGATGGAATTTCATGGACGGTTCTTAGATGCATCCATGATGACCAAAAAGTTCATTCTGCACAGTGGTTTGCCCTAAAGGCAGTATGCAACACAAAATTAGCTGTTGCTCTTACTATCATGGAAGAGTGTTTTGTGTCGATGTTTGATCCAAGAACAGGCATCCACATGATTCCTCAAGTTTTATATAACTGGGGGTCTGAGTTTGCTCGTCTGAATTTTCAAGGGTTTTACACCATGGTATTGGAGAAACAGGATGTGTTAATATCTGTAGCATCTATCAGGGTGCATGGAACTACTGTAGCAGAGATGCCTCTAATTGCAACTTGCAGTAAGTATCGTCGCCGGGGAATGTGCCGACTCCTTGTGAATGCTATTGAACAGATGTTAACATCTTTCAAGGTGGAAAAGCTTGTGATATCAGCCATTCCAGATTTGGTTGAGAGATGGACTAAAGGCTTTGGGTTTATACCCGTTGATGACATTGAAAGGCAAAGACTGAAAAAAACTAACTTGATGGTTTTTCCTGGGACAATGTTACTTGTGAAATCCTTATATGGGAAAGAGAAAATTGAAGGACTCTGTAATCAATCAACTCTAGCTACAGATGAATCAATCCAAGCAGGTTTCAGTTCTGAAGGAATGACCATTACTGAATCATTGGCACAGCATGTTGGAAACATATCTACCAACAAAGTTGAAGCAAAGTCGGAACATGAACCTATGGATGGTGAAAATCTATCTGACTATAAGGCTGGCAGTGAAACCAGCACAGATCATAACATGCAAGTTGTTGACACTGCATTAGGAGCCAAACAATCAACAGAAATAAGTGACACTTCTAAAGAAGAGAAGATAACTCACTCCACAGTTTCAGGTGGGTCAGAGAAATCTATTGAAGAAAACAACATGCAGGAATTGAGAACAAGCAACAACGTGAAAATGGCAAGTGATTCAGTGCAGCAATCCAGTGAGAATTGTGCTGACAAAGATGGTTCTGAAGCAGGTATAAGTATTGTTGAGGGCAAGGACATCAAAATAGGCGAGGGTCAGGAAAATGCTTTGCAGGGCCATTTTTCAAATTTGTCCTGCAAAACATTTTTAGGCAGCAATTTTGACACAGACTCCAATATTGAATGCGCAGTGATGTATGATGAAACAGCTTTTTTTGAAACATTTGCAAAATCTGCAAGCTGAATCAGAAGTTGAAAGAAAGTAGATGTTTAGAGGGATGGTGTGATGATGCTCATAAAAAAGTTGTAGGGTATCTTAGGAAACTAACTGCAAGATATGGAAACATAAAAATGGGTTCAAGACAACCGATTAGTTAAGTTAAAATTTTGACATTGTATGGAACTAGGAACCGATGTGTGGCAGATCTGACGTAGGCAAACAAAAGTGTTTAGGCCCTTGCTTTGGTTGTAAGGAAGATGATATATCAAAGGAGATTGTGCTACAAAATAGACATAGATGGGATGTTCAAATCACTTTATTTATGCACCAACTAATTGCCAATATAATCAATCAAAATTTCATTAAACGGTACGGCCTGAGGCATGGGAAGTTATCTTTCTTTTTACCACAACCGCTGCGTGTAAGTTGAAGATTTTATAAAAGAAC 4802 0.3955 MLIRNEIEDLCCDNFEGSNEERQIFSEVFSGNGIFQSSEKCLVPGSFEHESARNTFKSFCSSNENSVVLHPSSSRLTQPEDDFNVIQHSKEPAVGCVPDGFICEDQNDEDVNVKRMKFSLHELACSRSDSEKKLCSSQLSKVVVSNLSHATIAYDSEPIAFHLVESSKHGVISSCYLLNHNKLNKQAAKADVDVTNFNSTAADGNIAKEVSVSKAAASPVSQESFANRLVVTSPSITIVKKSGSPLNPDEMPESSNVDISNSSSMLEEEDPRTILQFHILQLLRMAGWSIEKRQRPSRRYPESVYRTPEGKPIREFTKAWRLCGELLSAEKCNLMCRDYKEWTDISQFWSDLSCALINVEKTKMKSEDLSAILAYRWWLLDPFVVVIFVDRKIGALKKGEIVKATRSLVSSKYKVACALIDSSSGNSNQVPGGSTVNAVHHAKIRKSRGVDNQCSENYGETNKIIDGDVPVGMSEENNASGLSHDLDHSHDSRAMQQSECSEEEDGKISVNSVFGKDNKYSASNVILKKKMRRKCKRVSEIKLSMLYHGDRLGSTVTDQVQLLDGEASGLGEVQDYLVDTAGKKRNCRKLSSACAIQRNIRKTNCSIAGTDKSNRCRIKDDDLLVSAIFRNKDFSTKAIWGNSNGKSCNSRGQRKLKSQKGRCRLLPRNPCNGGKHNKDNRFYLGTRTILSWLIDNGVLSLNDVIQYRNPKDNVVIKDGRITKDGIICTCCGKVLALSEFKFHAGFTLNRPCLNIFMESGEPFTLCLLQAWSAEYKARKSQNLAGHADDNDKNDDSCGLCGEGGELICCDNCPSTFHLACLSTQEIPEGDWYCTNCTCRICGNLVIDKDISDAHDSLQCSQCEHKYHEKCLKDRDKQEGAVSDTWFCGQSCQEVYSGLQSLVGLVNQVDDGISWTVLRCIHDDQKVHSAQWFALKAVCNTKLAVALTIMEECFVSMFDPRTGIHMIPQVLYNWGSEFARLNFQGFYTMVLEKQDVLISVASIRVHGTTVAEMPLIATCSKYRRRGMCRLLVNAIEQMLTSFKVEKLVISAIPDLVERWTKGFGFIPVDDIERQRLKKTNLMVFPGTMLLVKSLYGKEKIEGLCNQSTLATDESIQAGFSSEGMTITESLAQHVGNISTNKVEAKSEHEPMDGENLSDYKAGSETSTDHNMQVVDTALGAKQSTEISDTSKEEKITHSTVSGGSEKSIEENNMQELRTSNNVKMASDSVQQSSENCADKDGSEAGISIVEGKDIKIGEGQENALQGHFSNLSCKTFLGSNFDTDSNIECAVMYDETAFFETFAKSAS 1306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g02286 1306 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 841 895 IPR013083 -
Pste3g02286 1306 Pfam Tify domain binding domain 719 769 IPR032308 -
Pste3g02286 1306 Gene3D - 945 1078 - -
Pste3g02286 1306 SMART PHD_3 838 892 IPR001965 -
Pste3g02286 1306 SMART PHD_3 796 837 IPR001965 -
Pste3g02286 1306 ProSiteProfiles Zinc finger PHD-type profile. 794 839 IPR019787 -
Pste3g02286 1306 CDD PHD_SF 837 887 - -
Pste3g02286 1306 MobiDBLite consensus disorder prediction 1182 1206 - -
Pste3g02286 1306 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 787 840 IPR013083 -
Pste3g02286 1306 CDD PHD1_AIRE 797 836 - -
Pste3g02286 1306 SUPERFAMILY FYVE/PHD zinc finger 781 837 IPR011011 -
Pste3g02286 1306 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 947 1086 IPR000182 GO:0016747
Pste3g02286 1306 Pfam PHD-finger 797 838 IPR019787 -
Pste3g02286 1306 PANTHER PHD FINGER FAMILY PROTEIN 1 1232 - -
Pste3g02286 1306 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 944 1070 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g02286 Pste-Chr3 16013612 16024629 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g02286 1 1103 PHD Transcription Factor Family AT3G14980 41.367 0.0 778
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Pste3g02286 TDBD 1e-15 No_clan