Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g02264 GTTTGGGTGAAATAGCAGTACTCTAGTCTCCAAACAAACATGGCGAAAAAGGTGAAAGGGTCTCACTCTGCCTCTTCGACCTCTGCCTCTGCTTCTGCCTCTGCCTCTTCCCGGCTAGTGCTGAGGATTAAATCAAAGGAGGGAATCAAGAGATCGGTGCGACAGACTAACTCAATAAAGAAACCCAAAGCAAAGCCAAAGAAGAACAAACAAAAGTTTGATGCTATGAAACCAAAGAAACCTCCTACAGCTTTCTTCTACTTCTTGGAGGATTTTCGTAAAGAATTTCAAGAGCAGAATCCAGATATAAAGTCAATGCGTGATATTGGCAAGGCATGTGGAGAGAAGTGGAAAACAATGAATTTTGAGGACAAAGTTCAATACTATGATATAGCAACAAAAAAACGTGAAGAATTTGATAGAGCAATGGCAGAATTTAACAAGAAAATGGACAATGGCGAGTTTGACGAAACTGATGAAGACTCAGAGTTTGATGAGTAAAGGCACATAATTTTTTCTTACTACGTAAGGTTGGATCTGTATTAATTGAAACTACTTGGACTAACAGTTGTACATTCAGTTATTGTTAGCTCGTGTCTGTCCTTGTTCATAATTATCATTTCTGTGTGCATGTAATGTATATTAGTTGTATTTAAATGTTTAAAATGGGTAAGAAACGCTAAGTAGGAAAAAAACCTAACTCGTGCACTTCATTGATTCATTTATATGTAACAATATTTCCTTGTGTTAACCTAGTACCTAGACA 766 0.3721 MAKKVKGSHSASSTSASASASASSRLVLRIKSKEGIKRSVRQTNSIKKPKAKPKKNKQKFDAMKPKKPPTAFFYFLEDFRKEFQEQNPDIKSMRDIGKACGEKWKTMNFEDKVQYYDIATKKREEFDRAMAEFNKKMDNGEFDETDEDSEFDE 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g02264 153 PANTHER HIGH MOBILITY GROUP B PROTEIN 4-RELATED 33 150 IPR031061 -
Pste3g02264 153 SMART hmgende2 64 135 IPR009071 -
Pste3g02264 153 Pfam HMG (high mobility group) box 65 134 IPR009071 -
Pste3g02264 153 MobiDBLite consensus disorder prediction 7 26 - -
Pste3g02264 153 SUPERFAMILY HMG-box 57 139 IPR036910 -
Pste3g02264 153 MobiDBLite consensus disorder prediction 1 65 - -
Pste3g02264 153 CDD HMG-box_AtHMGB1-like 66 126 - -
Pste3g02264 153 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 65 134 IPR009071 -
Pste3g02264 153 Gene3D High mobility group box domain 62 136 IPR036910 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g02264 Pste-Chr3 15887099 15892055 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR HMG Pste3g02264 HMG_box 4.7e-18 CL0114