Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g02259 ATGTTGTCCCTAAAGATTTGTTCGACTATCGTCATTGTCCTTTCCATTGTATCCACAGTTTCCTATGCTGAAACAAGCTTGGACGTAGAAATTCAAGCTTTGAAAGCTTTCAAAAACTCCATCACTGTTGATCCAAATGAGGCACTTGCAGATTGGGTTGACAGTCACCACCACTGCAACTGGTCTGGCATTGCATGTGACTCATCAAATCATGTCATTTCAATTTCTTTGGTTAGTCTTCAGCTCCAAGGGGAGATTTCACCTTTCCTTGGAAACATTTCTGGCCTTCAGGTTTTTGATATGACTTCAAACTCATTTACTGGGCGCATTCCTGCTCAGCTCGGTCTTTGCACTCAACTTACTCAACTGATTCTTTTTGAAAATTCTCTCTTAGGTCCTATCCCTCCTCAATTAGGAAACCTTCAAAGCCTGCAGTATTTGGATTTAGGTAGCAACTTCTTGAATGGAAGCCTTCCTGACAGCATATTCAACTGCACTTCTTTGTTGGCTATTGCTTTTAACTTCAACAACCTTACTGGCAGAATCCCATCAAACATTGGGAATTTAGTTAATGCTATACAGATTATAGGTTTTGGAAATAACTTGGTAGGTTCTATACCTCTTTCCACAGGTCAGTTAGCAGCTTTGCGAGCTTTTGATTTTAGCCACAACGAGTTATCAGGTATAATACCTCGAGAAATTGGAAATCTAACAAATTTAGAATACCTTGAATTGTTTCAAAATTCTTTTAGTGGAAAAATCCCTTCTGAGCTTGGTAGGTGTAAAAAACTTTTAAAGCTTGAGTTATCCGACAATCAGCTTTTTGGAAGCATTCCTCCTCAGCTAGGAAATTTAGTTCAGTTGTTGGAATTGAAGTTACATCACAATAACTTGAATTCCACTATTCCATCTTCCATATTCCAATTGAAATCATTAACGCATTTAGGCCTCTCACAGAATAACTTGGAGGGAACAATATCTTCGGAGATTGGATCTCTGAGTTCTTTACAAGTTCTAACCCTGCATTTAAATAAGTTAACTGGTAAGATCCCTTCATCAATAACAAACTTGACAAACTTGACATATCTTTCAATGAGCCAGAATCTCCTTTCTGGTGAACTTCCTTCAAACTTGGGTGTACTTCATAATTTGAAGTTTCTGGTTTTGAACGTCAACAACTTACATGGATCCATTCCCCCTAGCATTACCAATATTACTAGTCTAGTAAATGTTAGTTTGTCTTATAATGCTTTAACTGGGAAAATTCCTGAGGGTTTTTCAAGGTCACCTAATCTTACCTTCCTGTCTCTTACATCCAACCAAATGACTGGGGAAATTCCCAATGACCTCTATAACTGCTCAAACCTTAGCACTCTAAATTTGGGAATCAACAACTTCAGTGGATTGATCAAATCAGGTATCCAGAACCTTTCTAAACTCATGCGCCTGCAGCTGAATGTAAATTCTTTCACAGGACCTATTCCACCAGAGATTGGAAACTTGAATCAACTCGTCACTTTATCCCTTTCTCAAAATAAGTTTTCAGGTCAAATACCTCCAACTTTGTCCAAACTTTCTCACCTTCAGGGGCTCACTCTGCATGCCAATCTATTAGAAGGTACAATACCCGATAAGCTCTCTGAATTAAAAGAACTAACTGAACTCTTTCTGCATCAAAACAAGTTGGGTGGTCAAATACCTGATTCTCTCTCAAAACTAGAGATGCTTTCATACTTAGACCTTCACGGCAATAAACTTAACGGGTCCATTCCAAGGAGCATTGGAAAGCTTAATCATCTTTTAGTTTTGGATCTCTCTCACAACCAGCTCACAGGATCAATTCCCGGAGATGTTATTGGACACTTGAAAGACATGCAGATATATCTTAACCTTTCATACAACCACTTGGCAGGAAATGTTCCAATTGAGTTGGGCATGATGGAAATGATACAAGCTATCGATATTTCAAACAATAATCTTTCAGGTTTCATTCCCGAAACACTTGCTGGATGCAGAAATCTGTTCAACCTTGATTTTTCAGGAAACAATATTTCAGGTCCTATTCCTACAGAAGCTTTTAGTCACATGGACTTTCTTCTAAGCTTAAACCTCTCAAGAAATCATTTAGAAGGTGAAATCCCTGAAATATTGGCAGAACTTGATCATCTTAGGTCCCTAGATCTCTCTCAGAATGATTTGAAGGGAACTATTCCTGAGGGTTTTGCCAACCTTTCAAACTTGGTGCATCTCAACCTTTCCTTCAATCAACTTGAAGGTCCTGTACCTAAGACTGGATTATTTGCACACATCAATGCATCTAGTATAATGGGAAACCAGGATCTTTGTGGAGCCAAGTTCCTTTCGCCATGCAGAGAGACAAAACATTCACTATCCAAGAAGAGCATATCTATTGTTGCTTCGCTTGGATCTCTTGCTGTGCTTCTACTTCTAGTGTTAGTGATTCTAATTCTCTATAGAGGCACCAAACTCTGCAATTCTAAAGAAAGAGATACTAATGTAAATCATGGAGCAGAATACAGTTCAACATTGACACTTAAAAGGTTCACTCCAAAAGAATTAGAGAATGCCACTGGATTTTTCAATGCAGACAGCATAATTGGCGCGAGCAGTTTGAGCACAGTTTACAAGGGTGAAATGGAAGATGGCCAAGTTGTTGCCATAAAAAAATTGAATTTGCAACAATTCTCTGCAAATACTGACAAGATATTCAAGAGAGAAGCCAACACCTTGAGCCAGATGAGACATAGGAATTTGGTCAAGGTACTTGGATATGCCTGGGAGAGTGGCAAAATGAAGGCTTTGGTTCTAGAGTACATGGAGAATGGGAATTTGGATAGCATCATACATTGCAAAGGGATAGATCAGTCTGTGATATCCAGGTGGACATTATCTGAAAGAGTCCGAGTTTTCATTTCTATTGCTAGTGCATTGGATTATCTGCACTTAGGTTATGATTTTCCCATTGTACACTGTGATTTAAAGCCTTCTAACATCCTTCTAGATAGAGAGTGGGAAGCTCATATCAGTGACTTTGGGACTGCACGAATACTTGGTCTTCATCTGCAGGATGGTAGTACCCTTTCCTCATCATCAGCATTGCAAGGCACAGTTGGCTATATGGCACCAGAATTTGCCTACATGGGGAAAGTAACAACAAAAGCAGATGTGTTCAGCTTTGGCATCATAGTAATGGAGTTTCTAACAAAAAGAAGGCCAACAGGACTCTCAGAAGAGGATGGTTTGCCAATCACTTTGCGTGAAGTAGTGGAAAAAGCCCTTGCAAATGGAATAGAACAACTTATCAATATTGTGGACCCTTTGTTGACCTGGAATGTTACAAAAGATCATGATGAAGTGTTGGTAGAGCTCCTTAAGCTATCCCTGTGTTGCACCCTCCCTGATCCTGAACATCGACCCAATACAAATGAGATGCTATCTGCCCTTGTGAAGCTTCAAACAGCACTGTCTTGTTAA 3495 0.3934 MLSLKICSTIVIVLSIVSTVSYAETSLDVEIQALKAFKNSITVDPNEALADWVDSHHHCNWSGIACDSSNHVISISLVSLQLQGEISPFLGNISGLQVFDMTSNSFTGRIPAQLGLCTQLTQLILFENSLLGPIPPQLGNLQSLQYLDLGSNFLNGSLPDSIFNCTSLLAIAFNFNNLTGRIPSNIGNLVNAIQIIGFGNNLVGSIPLSTGQLAALRAFDFSHNELSGIIPREIGNLTNLEYLELFQNSFSGKIPSELGRCKKLLKLELSDNQLFGSIPPQLGNLVQLLELKLHHNNLNSTIPSSIFQLKSLTHLGLSQNNLEGTISSEIGSLSSLQVLTLHLNKLTGKIPSSITNLTNLTYLSMSQNLLSGELPSNLGVLHNLKFLVLNVNNLHGSIPPSITNITSLVNVSLSYNALTGKIPEGFSRSPNLTFLSLTSNQMTGEIPNDLYNCSNLSTLNLGINNFSGLIKSGIQNLSKLMRLQLNVNSFTGPIPPEIGNLNQLVTLSLSQNKFSGQIPPTLSKLSHLQGLTLHANLLEGTIPDKLSELKELTELFLHQNKLGGQIPDSLSKLEMLSYLDLHGNKLNGSIPRSIGKLNHLLVLDLSHNQLTGSIPGDVIGHLKDMQIYLNLSYNHLAGNVPIELGMMEMIQAIDISNNNLSGFIPETLAGCRNLFNLDFSGNNISGPIPTEAFSHMDFLLSLNLSRNHLEGEIPEILAELDHLRSLDLSQNDLKGTIPEGFANLSNLVHLNLSFNQLEGPVPKTGLFAHINASSIMGNQDLCGAKFLSPCRETKHSLSKKSISIVASLGSLAVLLLLVLVILILYRGTKLCNSKERDTNVNHGAEYSSTLTLKRFTPKELENATGFFNADSIIGASSLSTVYKGEMEDGQVVAIKKLNLQQFSANTDKIFKREANTLSQMRHRNLVKVLGYAWESGKMKALVLEYMENGNLDSIIHCKGIDQSVISRWTLSERVRVFISIASALDYLHLGYDFPIVHCDLKPSNILLDREWEAHISDFGTARILGLHLQDGSTLSSSSALQGTVGYMAPEFAYMGKVTTKADVFSFGIIVMEFLTKRRPTGLSEEDGLPITLREVVEKALANGIEQLINIVDPLLTWNVTKDHDEVLVELLKLSLCCTLPDPEHRPNTNEMLSALVKLQTALSC 1164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g02259 1164 Pfam Protein kinase domain 869 1153 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g02259 1164 FunFam LRR receptor-like serine/threonine-protein kinase FLS2 27 178 - -
Pste3g02259 1164 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 620 794 - -
Pste3g02259 1164 Pfam Leucine Rich Repeat 143 165 IPR001611 GO:0005515
Pste3g02259 1164 Pfam Leucine Rich Repeat 722 744 IPR001611 GO:0005515
Pste3g02259 1164 FunFam Inactive leucine-rich repeat receptor-like protein kinase 447 544 - -
Pste3g02259 1164 Gene3D Ribonuclease Inhibitor 194 263 IPR032675 -
Pste3g02259 1164 PRINTS Leucine-rich repeat signature 720 733 - -
Pste3g02259 1164 PRINTS Leucine-rich repeat signature 600 613 - -
Pste3g02259 1164 SUPERFAMILY Protein kinase-like (PK-like) 842 1155 IPR011009 -
Pste3g02259 1164 Pfam Leucine rich repeat N-terminal domain 30 67 IPR013210 -
Pste3g02259 1164 PANTHER UNNAMED PRODUCT 10 107 - -
Pste3g02259 1164 SUPERFAMILY RNI-like 464 763 - -
Pste3g02259 1164 FunFam LRR receptor-like serine/threonine-protein kinase FLS2 946 1163 - -
Pste3g02259 1164 SMART serkin_6 867 1162 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g02259 1164 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 179 430 - -
Pste3g02259 1164 Gene3D Transferase(Phosphotransferase) domain 1 946 1163 - -
Pste3g02259 1164 Pfam Leucine rich repeat 651 709 IPR001611 GO:0005515
Pste3g02259 1164 Pfam Leucine rich repeat 526 586 IPR001611 GO:0005515
Pste3g02259 1164 CDD STKc_IRAK 873 1158 - -
Pste3g02259 1164 SUPERFAMILY L domain-like 30 299 - -
Pste3g02259 1164 ProSiteProfiles Protein kinase domain profile. 867 1162 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g02259 1164 SMART LRR_typ_2 285 309 IPR003591 -
Pste3g02259 1164 SMART LRR_typ_2 744 769 IPR003591 -
Pste3g02259 1164 SMART LRR_typ_2 333 356 IPR003591 -
Pste3g02259 1164 SMART LRR_typ_2 357 381 IPR003591 -
Pste3g02259 1164 SMART LRR_typ_2 549 573 IPR003591 -
Pste3g02259 1164 SMART LRR_typ_2 141 165 IPR003591 -
Pste3g02259 1164 SMART LRR_typ_2 720 743 IPR003591 -
Pste3g02259 1164 SMART LRR_typ_2 597 621 IPR003591 -
Pste3g02259 1164 SMART LRR_typ_2 213 236 IPR003591 -
Pste3g02259 1164 SMART LRR_typ_2 237 261 IPR003591 -
Pste3g02259 1164 SMART LRR_typ_2 501 525 IPR003591 -
Pste3g02259 1164 Gene3D Ribonuclease Inhibitor 27 193 IPR032675 -
Pste3g02259 1164 FunFam LRR receptor-like serine/threonine-protein kinase 547 619 - -
Pste3g02259 1164 Gene3D Ribonuclease Inhibitor 264 503 IPR032675 -
Pste3g02259 1164 Gene3D Ribonuclease Inhibitor 504 794 IPR032675 -
Pste3g02259 1164 SMART LRR_sd22_2 501 530 - -
Pste3g02259 1164 SMART LRR_sd22_2 381 407 - -
Pste3g02259 1164 SMART LRR_sd22_2 213 239 - -
Pste3g02259 1164 SMART LRR_sd22_2 309 332 - -
Pste3g02259 1164 SMART LRR_sd22_2 141 167 - -
Pste3g02259 1164 SMART LRR_sd22_2 573 599 - -
Pste3g02259 1164 SMART LRR_sd22_2 357 380 - -
Pste3g02259 1164 SMART LRR_sd22_2 720 746 - -
Pste3g02259 1164 SMART LRR_sd22_2 549 572 - -
Pste3g02259 1164 SUPERFAMILY L domain-like 199 491 - -
Pste3g02259 1164 ProSitePatterns Serine/Threonine protein kinases active-site signature. 995 1007 IPR008271 GO:0004672|GO:0006468
Pste3g02259 1164 Gene3D Phosphorylase Kinase; domain 1 828 945 - -
Pste3g02259 1164 FunFam LRR receptor-like serine/threonine-protein kinase FLS2 827 945 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g02259 Pste-Chr3 15826175 15830407 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g02259 4 1159 Receptor kinase-like Gene Family AT5G46330 52.695 0.0 1140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Pste3g02259 Pkinase 2.1e-41 CL0016