Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g02228 ATAATCATAGTTATTAGTTAGCATTTGGTACGTTGACACCCATTGTACTGCAAATCTCTCTCTTCTCTTTTTCTGTGTTTTGATTTCTATCACAATTGACAAATACTCTCTCTGCGACTCCCTTTTCTTGTGCATTTCCACGATCATCTTCCGTGCATAAGCAAAAGGCTTTCCCTGTGTTGAATTGGAATCCCAAATACCCTTATGGAAAAGGAGCCTCTGCTCCCATATTTCAGCCCCAGAAAGAAGCCTCCTCCATTGTCTCCACTTTGTCCCTTGCCAGAATACGACGAAGTCCTTCTTCCAATGACCCCTATGGAATTCAAGGACCGTCTCATCTTTGGTCCTTCTGCTTCCCCAAGAGACCCTTCTCCTTTGGCTGAATCCTTAATACTTGCCCACAATTCCCCGAAATGTTCTTCCTCTTCCTCTCAGGACTATGCACAACCAACACTATTGGATTCCCAACACCAACACCAACACCAACGTCAACATCAACATCAACACCAACTCTCCTCTTGGCTCCTCGACCCCAATTACCCATGGAAGAAGACAAACCTTCATCGCTCCAAAACCGCCCCAGCCATGGCCGTGATTAGCGATTTTAACCCCCAATCAACCGAGCAAAGACCCCAATTTGCCAGACAGAGTGTTGTGCGCCAGGGTGTTATTCTTCTTGCTCTCTATTTGGCTTTAGGGGTTGTTATTTATTGGTTCAATCGTCATAATTTTTCAGCTACTGAGACTCATCCTATAGTTGATGCATTGTATTTTTGTATAGTCACAATGTGCACAATAGGGTATGGTGACATCACTCCCAATAGTACGGCCACTAAGCTTTTCTCCATATTGTTTGTGTTGGTGGGGTTTGGCTTTATAGACATATTGTTGAGTGGGATGGTTAGCTATGTGCTTGATTTGCAGGAGAATCATATGTTGACGGCAGTGAAGGGGAGGAGGGGTGAGAAGGATGGCAAGTCCTATATAATTGATGTCAAGAAAGGGAGGATGAGGATTCGGTTGAAGGTGGCACTGGCGTTGGGGGTTGTGGTCATTTGTATTGGGGTAGGCGTCACAGTTATGCATTTTGTGGAGAAGCTAGGATGGTTGGATTCGTTTTATCTTTCGGTTATGTCAGTTACCACTGTTGGGTATGGTGACCATGCATTCAAGACCATGCATGGTCGGATCTTTGCAGCCATTTGGTTGCTTGTGTCAACTCTCGCAGTGGCCCGAGCATTCCTCTATTTGGCTGAGGCAAGGGTGGATAAGCGGCATAGGAGGATGGCAAAGTGGATTCTTGGTCAGGATATGACTGTTTCTGAGTTTCTTGCTGCAGACATAGACAATAATGGCTTTGTGAGTGCTTTACTTAAGCGTTTGTGCCTACGCGTTCGAAAAATTCTGACCCGAAATGACTATGAAGAGATGGTTTCTGTCGGTATTGTGGCAGGGAACCTATGTAGTTTAACAACTCCTTCGACAAAGTCCATTGAATCGAGGTCCCTGTTCTGTACCAGCAGTACTTTTTCTGGGTCTGCAACTCCATCGGTTCCTTCAAAGACTCCATTCCCTTCCACCGTGCTTCAATTTGTAGTTTGTTTAGATGTTGTGCTTCATCATGTTAGTGCTACATCTCTATTTTGTTTTCAAGTTCTCGGTAAATCAGAATATGTTATATACAAGCTCAAGGAGATGGGAAAAGTATCTGAGAAGGACATCATGGAGGTTAGTGAGAAGTTTGATAGACTAGATGCTGGCAACTGCGGAAAAATAACACTTGCTGATCTTATGGAGAGGTCATAATTGATCAGCTCAGCGTCGCTATTCAAGAAACAAGGGAATTCTATTTCTGCAGTATTGCCAATGAGAGAAGAGAGTGTCAGAATGTCAGATTCTCAAGTTGATGGGAACTTTCCTCTTTTGGGGGCTGAGAGGGATATCTGGTTTTCAAGATGCAAGCTGATGATTTTCCCGCTACCCTTTATGTCATGATCATTAACTCATGACACAATGTGAATGCTGGTGAATTTCTGGGTTTTTTTGCCCGAATCTCACAATTATTTAGGGGATGGTAAGGTGTTAACCTTGTCGAAATTCGGTTATATCCAATCACAGATTGTCAGATTGATGAGATGGCATGTGGAAATGGAGGGGACAATTTTGATTGGTTAAATATTTAATTTGTATATGTATTTTTTTTAATATGAATTGTATTAATTCTTTAGCATCTTATCTAGTGAGCTTATCTGGTTAGCCGTCTCTCGGTTAATTCCGCAGTCAAGTGGAACTTCTTGCTATTGTTTTTGTCAAGATGATTCAGTTAGCTCCGTGTAATAAAATGTCTCTTATTTAAGTCTTCCATA 2366 0.4256 MEKEPLLPYFSPRKKPPPLSPLCPLPEYDEVLLPMTPMEFKDRLIFGPSASPRDPSPLAESLILAHNSPKCSSSSSQDYAQPTLLDSQHQHQHQRQHQHQHQLSSWLLDPNYPWKKTNLHRSKTAPAMAVISDFNPQSTEQRPQFARQSVVRQGVILLALYLALGVVIYWFNRHNFSATETHPIVDALYFCIVTMCTIGYGDITPNSTATKLFSILFVLVGFGFIDILLSGMVSYVLDLQENHMLTAVKGRRGEKDGKSYIIDVKKGRMRIRLKVALALGVVVICIGVGVTVMHFVEKLGWLDSFYLSVMSVTTVGYGDHAFKTMHGRIFAAIWLLVSTLAVARAFLYLAEARVDKRHRRMAKWILGQDMTVSEFLAADIDNNGFVSALLKRLCLRVRKILTRNDYEEMVSVGIVAGNLCSLTTPSTKSIESRSLFCTSSTFSGSATPSVPSKTPFPSTVLQFVVCLDVVLHHVSATSLFCFQVLGKSEYVIYKLKEMGKVSEKDIMEVSEKFDRLDAGNCGKITLADLMERS 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g02228 533 MobiDBLite consensus disorder prediction 1 21 - -
Pste3g02228 533 FunFam Two-pore potassium channel 3 258 372 - -
Pste3g02228 533 Gene3D - 258 370 - -
Pste3g02228 533 Pfam Ion channel 157 236 IPR013099 -
Pste3g02228 533 Pfam Ion channel 281 350 IPR013099 -
Pste3g02228 533 PRINTS Two pore domain K+ channel signature 313 322 IPR003280 GO:0005267|GO:0016020|GO:0071805
Pste3g02228 533 PRINTS Two pore domain K+ channel signature 193 221 IPR003280 GO:0005267|GO:0016020|GO:0071805
Pste3g02228 533 SUPERFAMILY Voltage-gated potassium channels 265 370 - -
Pste3g02228 533 FunFam Two-pore potassium channel 5 139 249 - -
Pste3g02228 533 Gene3D - 148 249 - -
Pste3g02228 533 SUPERFAMILY Voltage-gated potassium channels 147 236 - -
Pste3g02228 533 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 157 508 IPR003280 GO:0005267|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g02228 Pste-Chr3 15613352 15621758 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g02228 464 531 Ion Channels AT4G18160 45.588 2.80e-11 63.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g02228 3 15613352 15621758 Pste3g02228 3 15613352 15621758 ECH