Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g02216 GTTAACTTAATAACCATATCAAAAAGGATAATGGAGAATCAGGTTCCAAATGTCAAAAAGGCAATGGAAGAAGAGTTAACAAGAGGGCGTGACATGGCAAATCAGATACTTGAAGCACTTGCTCTTGATAAATTGAATACTCATCTTGAAGAGAACGGTGGGCCAAATTCAGTAGTGTTACCATTTGTTGAAGATCTTGTGCGCAAGGTTTTGTGTTCATTCACAAATACCCTTTTGCTTCTAAACTCCAATAACCATGTCTCCAATGAGGTGGCGGCGTTTACCACTCTCAGTTATGTAACTTCGTCCACAAATTGCCCTAAGCTTGAGTCTGCGGATGAAACTTGCAAGAGTCGCAATATTTTCAACCCTAAAAATCGAAGAGGGTGCTACAAGAGAAAATCAATTGCGCCAACTTGGGAGAAGGAGACCTCAATACTGATTGAAGATGGATATGAATGGAGAAAGTATGGACAAAAGATGACATTGCACGCCAAATACATTAGGAGCTACTACAGGTGCACTTACAAGGATGATCAAAGATGTGAAGCAATCAAACAGGTGCAGAGAATACAAGATAATCCTCCATTGTACCGAACAACCTATTATGGTCATCACACTTGTAAAAGCCCTATGAATCCTGAGATTATTTTGGAACCTCTTTCTCCCCCCGCCTCTTCCATAGTACTTAGCTTTAATAATAGCCTTCAAAGCAAACAAGAAAACCCGTTTTCCTCATCATCACTACTTACACCGGCGAAACATGATCCCCAGCAAGTGATTCACGATGACCATAGTGCTCAAAATCAATTGTCTATGTTAGAAAACCTCCTACTAAACGATTATGACGTTCCATTTGATTATTCGAGGAATTTCACTTTGCTATCATCAATTGAACCGGTTCAAGTTGACAATGTTTGTGGCCAGTTTGGATTTTGA 939 0.3983 VNLITISKRIMENQVPNVKKAMEEELTRGRDMANQILEALALDKLNTHLEENGGPNSVVLPFVEDLVRKVLCSFTNTLLLLNSNNHVSNEVAAFTTLSYVTSSTNCPKLESADETCKSRNIFNPKNRRGCYKRKSIAPTWEKETSILIEDGYEWRKYGQKMTLHAKYIRSYYRCTYKDDQRCEAIKQVQRIQDNPPLYRTTYYGHHTCKSPMNPEIILEPLSPPASSIVLSFNNSLQSKQENPFSSSSLLTPAKHDPQQVIHDDHSAQNQLSMLENLLLNDYDVPFDYSRNFTLLSSIEPVQVDNVCGQFGF 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g02216 312 ProSiteProfiles WRKY domain profile. 143 211 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste3g02216 312 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 39 239 IPR044810 GO:0003700
Pste3g02216 312 Pfam WRKY DNA -binding domain 149 209 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste3g02216 312 Gene3D WRKY domain 134 212 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pste3g02216 312 SMART WRKY_cls 148 210 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste3g02216 312 SUPERFAMILY WRKY DNA-binding domain 144 211 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g02216 Pste-Chr3 15525066 15526535 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g02216 25 282 WRKY Transcription Factor Family AT3G56400 34.601 2.50e-32 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pste3g02216 WRKY 7.1e-22 CL0274