Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g02215 GTAATGGAGAATCAGTTTCCAAATTGTGGCAGAAAGGCAATGGAAGAAGAGTTAGTGAGAGGGCGTGACATGGCAAATCAGATACTTGAACTACTTGTGCATGATAAATTTGACAGTCTTCTTGAAAAGGAAGAAAGGTCAAAGTCAGTGTTACCATTTGTTGAAGATCTTGTGCGCCAGGTGCTGTGTTCATTCACAAATACCCTTTTGCTTCTCAACTCCAATAACGATGCTTCTAATGAGGTGGCTGCGTCTATCACTCTCAAAGATCCCTCTTCCTCCACGAGTAGCCCAAACCAGGAATCTGTTGATGAAACCTGCAAGAGTCTCAATACTAAAAACAGAAGAAGAGGCTGCAAAAGGAACTCAATGCTGATTGACGATGGGTATCTGTGGAGAAAATATGGACAAAAATTGACAATGAATGCTAAATATCTCAGGAGCTATTACAGGTGCACTCACAAGAATGATCAGGGATGTGAAGCAATGAAACAGGTGCAAAGAGTTCAAGATGATCCTCCTTTGTACCGAACAACCTATTATGGCCATCACACTTGTAAAAGCCGTATGAATCCTGAGATTGTTTTAGAACCTCTTTCTCCCTCTGCCTCTTCGACATTACTTAGTTTTAATAACAACCTTCAAAGCAAACAACAAAACTTGTTTCCCTCACCACTACTTGCATCAACCAAACAGAAGCCCGTGAAAGTGACTCGTGACGACCATACTGTTCAAAATCATTTGTCTTTACTCGAAGACCTGTACAATTACGGATTTTATTTCGATTATTCAAGGCCTGTTGCTATGCTATCATCGACTGAACCTGTTGAATTTGACAATTTTTATGAGCAGTGTTTGGATTTTGATGTCTAGCTATTTGTTTTCTTTCCCGGGCGAGGCATCGACTCGAGAGTAGCTTTCGTGCTGTAAATGAAATAGTCTAGTTAGTAAAATATTTTTGCCTTAAATCTTCTCAAAGTAATAGCAAATAAACCTGTGA 1000 0.398 VMENQFPNCGRKAMEEELVRGRDMANQILELLVHDKFDSLLEKEERSKSVLPFVEDLVRQVLCSFTNTLLLLNSNNDASNEVAASITLKDPSSSTSSPNQESVDETCKSLNTKNRRRGCKRNSMLIDDGYLWRKYGQKLTMNAKYLRSYYRCTHKNDQGCEAMKQVQRVQDDPPLYRTTYYGHHTCKSRMNPEIVLEPLSPSASSTLLSFNNNLQSKQQNLFPSPLLASTKQKPVKVTRDDHTVQNHLSLLEDLYNYGFYFDYSRPVAMLSSTEPVEFDNFYEQCLDFDV 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g02215 290 SMART WRKY_cls 126 188 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste3g02215 290 Pfam WRKY DNA -binding domain 127 187 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste3g02215 290 SUPERFAMILY WRKY DNA-binding domain 123 187 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pste3g02215 290 ProSiteProfiles WRKY domain profile. 121 189 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste3g02215 290 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 20 208 IPR044810 GO:0003700
Pste3g02215 290 Gene3D WRKY domain 114 188 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pste3g02215 290 MobiDBLite consensus disorder prediction 88 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g02215 Pste-Chr3 15516052 15517866 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g02215 8 187 WRKY Transcription Factor Family AT5G01900 36.649 2.25e-31 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pste3g02215 WRKY 1.2e-23 CL0274