Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g02211 ATGGAGAATCATCATGAGGATCCAAATGGCAAAAGGGCAATGGTGGAGGAGCTATTGAGAGGGCGTGACATGGCAAATCAGTTATTGGAAGTATTTGCTCGTGATAAATGGCACAGTCATCTCGAAAAGGAAGAAGGGTCAAAGTCAGTGTTTCTGTTTGTTGAAGATCTTGTGCACAAGATCAGCTGTACTTTCACAAATACCCTTTTCATTTTGAATTCCAATAGTGATGTCTCCGATGAGGTTGCGGCGCCTATGGAAGAAATCTGCAAGAGTCACGGTATTCTCAACACTAAAAAACGAACAAGAAGCTACAAGAGAAAATCAATAGCGCCAACTTCGGAGAAGGAAAGCTCGACACTGATTCAAGATGATGGTCATGTATGGAGAAAGTACGGACAAAAAATGACATCGAACGCTAAATACCAGAGGAGCTACTATAGGTGCACTCACAAGAATGATCAAGGATGCCAAGCAATCAAACAAGTGCAAAAAATTCAAGATAACCCTTCTTTGTACCGTACAACCTATTATGGCCATCACACTTGTACAATAATCCCTTTGAATCCCGATAATATCTTGGAACCTTTTTCTCCATCAACCTCTTCCATATTACTTAGCTTCAATAACAACGTTCAAAACAGACAAGGAAGCCCGCTTTCCCCATCACTGCTTGCATCAACGAAAAATGAGCCCCAGGAAGTGATTCACGATGACCATAGTGCTCAAAATCAATTGTCTACATTAGAAAATCTCCTATTAAATGATTATGAGATGTCCTTTTATTATTCAAGGAATGCTAATTTGCTACCATGGACTGAACCCCTTCAATTTGAGAATGCTTATGAGCAGTTTGGATTTTGA 864 0.4005 MENHHEDPNGKRAMVEELLRGRDMANQLLEVFARDKWHSHLEKEEGSKSVFLFVEDLVHKISCTFTNTLFILNSNSDVSDEVAAPMEEICKSHGILNTKKRTRSYKRKSIAPTSEKESSTLIQDDGHVWRKYGQKMTSNAKYQRSYYRCTHKNDQGCQAIKQVQKIQDNPSLYRTTYYGHHTCTIIPLNPDNILEPFSPSTSSILLSFNNNVQNRQGSPLSPSLLASTKNEPQEVIHDDHSAQNQLSTLENLLLNDYEMSFYYSRNANLLPWTEPLQFENAYEQFGF 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g02211 287 Pfam WRKY DNA -binding domain 124 183 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste3g02211 287 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 35 214 IPR044810 GO:0003700
Pste3g02211 287 ProSiteProfiles WRKY domain profile. 118 186 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste3g02211 287 Gene3D WRKY domain 106 186 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pste3g02211 287 SUPERFAMILY WRKY DNA-binding domain 120 184 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pste3g02211 287 SMART WRKY_cls 123 185 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g02211 Pste-Chr3 15487945 15491785 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g02211 11 185 WRKY Transcription Factor Family AT5G01900 39.665 1.40e-29 111
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pste3g02211 WRKY 1.7e-22 CL0274