Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g02208 CAAATAAGCAATGGAGAATGAACCGTCAAATGGAAGAAAGGCAATGGAAGAAGAGCTAATCAAAGGGCGTGATATAGCAAACCGGTTACTTGAAATACTTGTTCCTAAATCCGACACTACTCATCATGGAGGTGTAGAAGTAGAAGTAGAAGGGTTAGTGTTACCCTTTGCTGAAGATCTTGTTCGTAAGGTACTCAGATCTTTCACAAATACCCTTTTGCTATTGAACACTCACAGTGATGTCTCCAATGAGGTTGTTATGCCCACCACTCTCAAAGACGTCCCTTCCGTGAAAATCCCAAAGTCTGAGGATAAGGATGAGGCTAACTGCGAGGTTTTCTTCAACGCTAAAAGACGAAGAGGGTGCTACAAGAGAAAATTAAGTGCACCAACATGGGAGAAGAATAGCTCAAGCCTGGAGGAGGATGGCTATGTGTGGAGAAAGTATGGGCAGAAAATGACAATGCATGCAAAATACCTCAGGAGCTACTACAGATGCACTCACAAGTATGATCAGGGTTGTCCAGCAACCAAACAGGTCCAAAGAATTCAACAAGACCCTCCATTGTTCCGGATAACTTATTATGGCCGTCACAATTGCAAAAGCTCTTATAGTCCAGAGATAATGTTGGAACCAGCTTCTTCTTCAGACTCTTCTGTGTTTCTTAGCTTCAGTAAAACCTTGCCAGGCAAAGAAGAATTCCCATTTTCCTCATCACATTCTTCATCCACCAAACAGGAGCCCGTGGAAGTGATTCCGGATGACCATCTTGTTCACAACCAATTACCCTCACCAAATTACCACCTGTTATGTGACTATGAGATTGATTTCAATTATTCGAGGCATGATACTATGCTATCCTCCACTGAATCAGTATACTTTGATGAAGTTTACGGGAGTTGTCAGGAATTTGATGGCTAAGCATGTTCAGTTTCTGCATAATTTATTTACTTTTTAAGGGCAATTCATTGGTAACTTCCTCTTTGATTGAAAGAGCTTATTTACTTCTATGCATTTTAATTTACTGAG 1030 0.4097 MENEPSNGRKAMEEELIKGRDIANRLLEILVPKSDTTHHGGVEVEVEGLVLPFAEDLVRKVLRSFTNTLLLLNTHSDVSNEVVMPTTLKDVPSVKIPKSEDKDEANCEVFFNAKRRRGCYKRKLSAPTWEKNSSSLEEDGYVWRKYGQKMTMHAKYLRSYYRCTHKYDQGCPATKQVQRIQQDPPLFRITYYGRHNCKSSYSPEIMLEPASSSDSSVFLSFSKTLPGKEEFPFSSSHSSSTKQEPVEVIPDDHLVHNQLPSPNYHLLCDYEIDFNYSRHDTMLSSTESVYFDEVYGSCQEFDG 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g02208 303 SUPERFAMILY WRKY DNA-binding domain 134 198 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pste3g02208 303 ProSiteProfiles WRKY domain profile. 132 200 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste3g02208 303 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 34 224 IPR044810 GO:0003700
Pste3g02208 303 SMART WRKY_cls 137 199 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste3g02208 303 Gene3D WRKY domain 125 200 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pste3g02208 303 Pfam WRKY DNA -binding domain 138 198 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g02208 Pste-Chr3 15477836 15479752 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g02208 1 200 WRKY Transcription Factor Family AT3G56400 36.946 3.70e-33 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pste3g02208 WRKY 1.5e-23 CL0274