Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g02196 ATGACGTCAGGAGCGCGGCAACCCACGTGGAAGGAGCGAGAGAACAACAAGCGGAGAGAGAGAAGACGAAGGGCCATCGCTGCCAAGATCTTCGCCGGTCTCAGAATGTACGGTAACTACAAGCTTCCCAAACACTGCGACAACAACGAAGTTCTCAAAGCTCTCTGCAACGAAGCTGGTTGGACTGTGGAACCAGATGGCACCACCTATCGCAAGGGATGCAAGCCTGTTGAACGTATGGACATAGTAGGTGGCTCTGCAGCAGCAAGCCCTTGCTCGTCTTACCATCCAAGTCCCTGTGCTTCCTACAACCCCAGTCCAGGCTCTTCTTCCTTCCCAAGTCCTCGCTCATCCCCATACCCTCCAAATCCAAATGGTGATGGCAACTCTCTCATTCCATGGCTCAAAAACCTTTCATCTGGATCATCCTCTGCATCCTCTTCCAAGCTTCCCCAGCTGTACATTCAGACTGGCTCTATCAGTGCACCTGTCACTCCTCCAATCAGCTCTCCATCCTCCCGAAATCCCCGAGTCAAAGCTGACTGGGAGGAGCAGATCAATCGCCCAGCGTGGGGTAGTCCAGCATACACCTTCCTGCCCTCTTCAACTCCTCCAAGCCCTGGCCGCCAGGTTGCTGATACAGACTGGTTTGCTAAGATCAGCAAGATTCCTCAGGGAGGACCAACTTCTCCAACCTTCAGCCTGGTCTCTTCTAACCCATTTGGCTTCAAGGAAGATGTTATGGGTGGTAGCAGTTCCTGCATGTGGACTCCAGGGCCCAGTGGAACTTGTTCTCCAGCTATTGCTGCAGGTTCTGAAAACACTTCTGACATTCCAATGGCTGAAGCAGTGTCAGATGAATTTGCCTTTGGAAGCAGCTCTTCGGGGGTAGTGAAGCCTTGGAAAGGAGAGAGGATCCATGAAGGTTTCGGAACAGATGATCTTGAGCTCACTCTTGGGAGCTCAAAAACCAGGTAA 978 0.5225 MTSGARQPTWKERENNKRRERRRRAIAAKIFAGLRMYGNYKLPKHCDNNEVLKALCNEAGWTVEPDGTTYRKGCKPVERMDIVGGSAAASPCSSYHPSPCASYNPSPGSSSFPSPRSSPYPPNPNGDGNSLIPWLKNLSSGSSSASSSKLPQLYIQTGSISAPVTPPISSPSSRNPRVKADWEEQINRPAWGSPAYTFLPSSTPPSPGRQVADTDWFAKISKIPQGGPTSPTFSLVSSNPFGFKEDVMGGSSSCMWTPGPSGTCSPAIAAGSENTSDIPMAEAVSDEFAFGSSSSGVVKPWKGERIHEGFGTDDLELTLGSSKTR 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g02196 325 MobiDBLite consensus disorder prediction 1 21 - -
Pste3g02196 325 Pfam BES1/BZR1 plant transcription factor, N-terminal 4 139 IPR008540 -
Pste3g02196 325 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 1 325 IPR033264 GO:0003700|GO:0006351|GO:0009742
Pste3g02196 325 MobiDBLite consensus disorder prediction 99 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g02196 Pste-Chr3 15384605 15387639 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g02196 1 325 BZR Transcription Factor Family AT1G78700 67.164 1.41e-128 368
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Pste3g02196 BES1_N 3.9e-66 No_clan