Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g02194 GGAAAGGGAGAAAAAGGTTTGGGCGGTGGTGGTGCCATGTTATGTTGGGTTCCGTTCTAAAATCTGCAGCGTTCTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATGATCCGCAAATTTGGCTAATCAGTCTTCTCCTTTTCTCTGACTCCATGAAAACCATTTCCCAGATCCACAAAATGTCCTAATTAACTCCCTTTCCCCATCTCTGCTTCCAACATGACGTCGGGCACGAGGCTACCCACGTGGAAGGAGCGAGAGAATAACAAGCGGAGAGAGCGAAGACGAAGAGCCATCGCTGCCAAGATCTTCGCCGGTCTCAGAATGTACGGTAACTTTAAACTCCCCAAACACTGCGACAACAATGAAGTCCTCAAAGCCCTTTGCAACGAAGCTGGTTGGACCGTTGAACCCGATGGAACCACTTACCGCAAGTCTATTAGAGATTTTGTCATATCAGCATTGCTTGAGTTGATTGACCATGAAATTGTTAGATTTGAGAGAATTTTGGTGATTGAAGTGCAACATAAGATGATGGAAATATTTTGTACAATCAGGGATGCAAGCCTTTAG 575 0.4539 MTSGTRLPTWKERENNKRRERRRRAIAAKIFAGLRMYGNFKLPKHCDNNEVLKALCNEAGWTVEPDGTTYRKSIRDFVISALLELIDHEIVRFERILVIEVQHKMMEIFCTIRDASL 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g02194 117 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 1 75 IPR033264 GO:0003700|GO:0006351|GO:0009742
Pste3g02194 117 Pfam BES1/BZR1 plant transcription factor, N-terminal 3 76 IPR008540 -
Pste3g02194 117 MobiDBLite consensus disorder prediction 1 20 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g02194 Pste-Chr3 15360626 15364331 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g02194 1 72 BZR Transcription Factor Family AT1G78700 91.667 4.65e-30 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Pste3g02194 BES1_N 1.1e-47 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g02194 3 15360626 15364331 Pste3g02194 3 15360626 15364331 ECH