Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g02188 GTGAGATCGGCTTTCCCTCCAACAAAATGAGCAAATAATCTTGCCAACTCTCCTTATTCTCTCTTCTCCGTTTTACTTTTCTTTCTTTTGTTCTGCCTCTCCTTCTTCCTTTCCATTCTCAAACTCTCCCTTTCAAAACAAAAAGCAAGAGATTAAGGTGGTCCTTCCTAATCTTAATCCAGACACACAACAGGAGCATGATACGATTTGTGATGTCTTCAAGCTCCAAAAATGTCTCTATTTCCTTCATTTGTGTGTTCCTGGCTTTGAATTGCTTCCAACACTTTGGATCCAACGCTCAACTCATACCACAAAATGAAGTTAAATTGCTACAAGCAATATCAGACAAGGTAGAGAACTTGAATTGGAAAATTACACAACGTTCCTGCAATGGGGATGCAGGATTCGATAACAAGCACATTTCAAGGGATCAGGATCAAATCACAAGGAATGTCACCTGCAATTGCTCTTCCAACAATAACACTATTTGCCATGTGACAATGATTGTGCTCAAGGGTGTCAATATAACTGGAGCTATACCAGATGAATTTGGAAATCTTACACGACTTGAATTACTTGATCTCACTAGGAATTATTTCAATGGCTCAATTCCAAAAAGCCTTGGACGCCTCTCATCACTTGTCACTCTGTCACTTTTGGGAAATCAACTTACTGGTTCAATTCCCTCTGAAATTGGTGATATGGCTAGTCTTCAAGAGATAAACTTGGAAGATAATCAACTTGATGGACCTCTTCCCGCGAGCCTTGGAAAATTGAGGAACTTGAAGAGAATACTTTTTTCTGCAAATAATTTCACAGGGACAATACCAGAAACATATGGAAATCTAAAGAATCTCAATCAGTTTAGGATAGATGGAAGCAGAATATCAGGGAAGATACCTAGTTTTATTGGGAACTGGACCAAACTTGATAGATTGGATTTACAGGGCACATCCTTGGAAGGGCCAATTCCTTCTGTCATATCTACGTTGACAAAATTGGAAGAATTGAGAATATCTGATTTGAAGGGTCCAACTATGACATTTCCTAATCTAAAGAATTTGAAAAATTTGCAAAGGCTGGAATTGAGAAATTGCTTAATCACTGGTACCATTCCAAATGATTTTGGAGGAATGCAAAGTTTAAAGACTCTAGATCTAAGCTCCAACATGCTGACGGGTTCAATCCCAGAATCATTTCAGGACTTGGGAAAAATAAATTACTTGTTTCTGACTAACAATTCTCTAAGTGGAAGAATTCCTGATTGGATTCTGAACACAAAACAGAATATTGATTTATCTTTGAACAATTTTACAGAGACTTCTGCACAGAGTTGTCAGATCTTGGATGTGAACTTAGCTTCCAGCCTCTCTCCCTCAGCAAACACTTCATTATCTTGTTTGAAGAGGGACCAACCTTGTTCAGGAAAACCCCGATTTCATTCAATGTTCGTAAACTGTGGAGGACCAGAAACAAAGTTTGATGGGAATGAATATGAAGCTGACCTCAGTCTACGTGGCATTTCAAACTATGTTTCTAGTGATGATGGTAACTGGGCTTATAGCAGCACTGGAGTATTTCTAGGAAATGAAAAAGCTGATTATGTAGCAACAAATCAGTTTTCTCTGCATATTAATGGTCCTGACTACTACCGAACAGCCCGCATGGCCCCTCTGTATCTTAATTACTATGGCCTTTGTATGATGAATGGCAATTATAATGTGAAACTTCATTTTGCTGAGATAGCGTTCTCTGATGACCATTCGTATAGCAGCCTTGGAAAGCGTATATTTGATGTTTCAATTCAAGGTTTTAAATACTTGAAAGACTTTAACATTGTGAAAGAAGCTGGTGGAGTTGGTAAGGGAATCACTAGGGAGTTTGATGTGAATGTTGTTGACAACACCTTGGAAATCAACTTATCCTGGGCAGGGAAAGGAACTAATGCCATTCCTATAAGAGGTGTATATGGACCTCTTATATCTGCTATCACTGTAACCCCAAACTTTAAAGTTCCTTCAAATGGGCTGTCTGCTGGAGCCATTTTTGGAATTGTTATTGGTGAACTTCTTGGTCTGAAAACAGGTTATTTCAGTTTAAGACAAATTAAAGCTGCTACTGATAACTTTAACCCTGCAAATAAGATAGGTGAAGGAGGCTTTGGACCAGTATACAAGGGTATTTTGTCAGATGGTGCCGTGATTGCTGTTAAGCAGCTCTCCTCCAAATCAAAGCAAGGGAATCGCGAATTCATCAATGAAATAGGCATGATATCTGCTTTGCAGCATCCAAATCTTGTGAAACTTTATGGCTGTTGTATCGAAGGAAATCAATTACTGCTAATATATGAATACATGGAGAACAATAGTCTTGCTGGTGCACTTTTTGGTAAAGAACAAGATAGGATGCACTTGGACTGGCCTAGAAGAATGAAGATTTGCGTGGGGATTGCAAAGGGACTAGCATATCTTCATGAGGAGTCAAGGTTGAAAATAGTACACAGGGATATTAAGGCAACCAATGTCTTACTTGATAAGCATCTGAATGCAAAGATCTCTGACTTTGGTTTAGCAAAACTTGATGAAGAAGAGAATACCCATATCAGCACAAGAATAGCTGGGACAATAGGTTACATGGCTCCTGAGTATGCTATGCGAGGTTACTTGACTGACAAAGCAGATGTTTATAGCTTTGGAGTTGTAGCTTTAGAGATTGTTAGTGGAAAGAGCAACACAAATTACAGACCTAAGGAAGAGTTTGTGTATCTTTTAGATTGGGCCTATGTTCTCCAAGAGCAAGGAAACCTTCTGGAGTTAGTGGATCCTAGTCTTTGTTCAAGGTACTCCTCAGAAGAGGCCATGAGAATGATGCAGATAGCACTGCTGTGCACCAATCCTTCTCCTACTCTTAGACCTCCTATGTCATCAGTGGTGAGCATGCTTGAGGGAAAAACTCCAGTTCAAGCACCAATAATAAAACGCGATGGCAGTGCAGCAGAAGATGTAAGATTTAAAGCCTTTGAGTTGTTATCACAAGACAGCCAAACTCAGGTCTCTTCTGCATTCTCACAAGATAGTATGGAGCAAAGAAGCAAGTCATTGGGGGGACCATGGCTTGACTCGTCCTTATCTCTTCCAAGTAGAATTGATTATTCTTCAACCAATCAACTTATTAGAAGTTCCAATGATGAATGATTTGCAAGTTGGGGAAGTCATCTCATTAAATTCAAATTCTTTTTGTAGAGGATATAAACAGTAACTAGTAGTTAAGGTGATAGTATGCGTACAAAAAATGTGAAGTCAAACGTCAGGTTTCCAAGTGTATAGAAGATTTTTTATTGTTGCTTACTATATGTGGTGGTTCATAGGCTAATCTTGCTTGAGGTGCGTGACTACTGCTGGTTCAAAGAAATTTTAGAAAATCAAACACATTTCATGAACAGTGGTCAGAGGGAATTTTACTATATATGGTGGTTTGATG 3480 0.3891 MIRFVMSSSSKNVSISFICVFLALNCFQHFGSNAQLIPQNEVKLLQAISDKVENLNWKITQRSCNGDAGFDNKHISRDQDQITRNVTCNCSSNNNTICHVTMIVLKGVNITGAIPDEFGNLTRLELLDLTRNYFNGSIPKSLGRLSSLVTLSLLGNQLTGSIPSEIGDMASLQEINLEDNQLDGPLPASLGKLRNLKRILFSANNFTGTIPETYGNLKNLNQFRIDGSRISGKIPSFIGNWTKLDRLDLQGTSLEGPIPSVISTLTKLEELRISDLKGPTMTFPNLKNLKNLQRLELRNCLITGTIPNDFGGMQSLKTLDLSSNMLTGSIPESFQDLGKINYLFLTNNSLSGRIPDWILNTKQNIDLSLNNFTETSAQSCQILDVNLASSLSPSANTSLSCLKRDQPCSGKPRFHSMFVNCGGPETKFDGNEYEADLSLRGISNYVSSDDGNWAYSSTGVFLGNEKADYVATNQFSLHINGPDYYRTARMAPLYLNYYGLCMMNGNYNVKLHFAEIAFSDDHSYSSLGKRIFDVSIQGFKYLKDFNIVKEAGGVGKGITREFDVNVVDNTLEINLSWAGKGTNAIPIRGVYGPLISAITVTPNFKVPSNGLSAGAIFGIVIGELLGLKTGYFSLRQIKAATDNFNPANKIGEGGFGPVYKGILSDGAVIAVKQLSSKSKQGNREFINEIGMISALQHPNLVKLYGCCIEGNQLLLIYEYMENNSLAGALFGKEQDRMHLDWPRRMKICVGIAKGLAYLHEESRLKIVHRDIKATNVLLDKHLNAKISDFGLAKLDEEENTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVALEIVSGKSNTNYRPKEEFVYLLDWAYVLQEQGNLLELVDPSLCSRYSSEEAMRMMQIALLCTNPSPTLRPPMSSVVSMLEGKTPVQAPIIKRDGSAAEDVRFKAFELLSQDSQTQVSSAFSQDSMEQRSKSLGGPWLDSSLSLPSRIDYSSTNQLIRSSNDE 998
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g02188 998 Gene3D Ribonuclease Inhibitor 45 171 IPR032675 -
Pste3g02188 998 ProSiteProfiles Protein kinase domain profile. 644 926 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g02188 998 MobiDBLite consensus disorder prediction 953 979 - -
Pste3g02188 998 Gene3D Transferase(Phosphotransferase) domain 1 720 928 - -
Pste3g02188 998 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 414 603 - -
Pste3g02188 998 CDD STKc_IRAK 650 917 - -
Pste3g02188 998 Gene3D - 416 603 - -
Pste3g02188 998 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 622 719 - -
Pste3g02188 998 SMART LRR_typ_2 313 336 IPR003591 -
Pste3g02188 998 SMART LRR_typ_2 169 193 IPR003591 -
Pste3g02188 998 SMART LRR_typ_2 289 312 IPR003591 -
Pste3g02188 998 SMART LRR_typ_2 121 145 IPR003591 -
Pste3g02188 998 Pfam Leucine Rich Repeat 171 193 IPR001611 GO:0005515
Pste3g02188 998 Gene3D Phosphorylase Kinase; domain 1 623 719 - -
Pste3g02188 998 Gene3D Ribonuclease Inhibitor 174 279 IPR032675 -
Pste3g02188 998 ProSitePatterns Serine/Threonine protein kinases active-site signature. 766 778 IPR008271 GO:0004672|GO:0006468
Pste3g02188 998 Pfam Protein tyrosine and serine/threonine kinase 648 914 IPR001245 GO:0004672|GO:0006468
Pste3g02188 998 SMART serkin_6 644 913 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g02188 998 SUPERFAMILY Protein kinase-like (PK-like) 629 916 IPR011009 -
Pste3g02188 998 Gene3D Ribonuclease Inhibitor 280 389 IPR032675 -
Pste3g02188 998 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 26 948 - -
Pste3g02188 998 FunFam Putative LRR receptor-like serine/threonine-protein kinase 720 927 - -
Pste3g02188 998 Pfam Leucine rich repeat 291 350 IPR001611 GO:0005515
Pste3g02188 998 Pfam Leucine rich repeat 99 158 IPR001611 GO:0005515
Pste3g02188 998 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g53440 278 401 - -
Pste3g02188 998 Pfam Malectin domain 417 598 IPR021720 -
Pste3g02188 998 SUPERFAMILY L domain-like 94 402 - -
Pste3g02188 998 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g53420 38 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g02188 Pste-Chr3 15325128 15335749 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g02188 26 982 Receptor kinase-like Gene Family AT1G53440 60.281 0.0 1182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pste3g02188 PK_Tyr_Ser-Thr 3.6e-50 CL0016