Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g02182 CTTCATACTCTTTACGTATAAACTGTGGTGGAAAATGACAACAATCAAGGAAAGTACATATGATGATGATTTAGATGTAGGAGGTCCAACTACATTTCACCATAATGGAATAAAAAATTGGGCATTAATCACTACTGGTACCTTCATGGACAAAGGTGTTGGAGACTATTATAAATACTCAAATATTTTCTCCGACTTCCTTGACTTACTATGGATTTTGCCTGGGCAATGGAAACTACACAGTAAATCTACACTTTGCAGAAATCATGATCAAACATTTAACAGCTTAGGAAGTTGGATATTTGTCAGGCAAATGGGAAAATTGGTGCAAAAGGACTTCAATATTGTAGAAGTAGCAGGCGGAATTGGTAAGGCAACTGTAAAATCATTCATGGCTATTGGATTTGGCATACCTCATGAAGAATCAAGATTGAAAGTATTTCATAGGGACTTCAAGAGCAATAATGTGTTGCTTGATAAAGACCTTAATCCAAAGATATATGACTTTGGTTTGGCTAAACTTGATGAAGAGGAAAACACTCATATGAGTATTGGAATTACTGGGACATATAAATATATGGCTCGTCTGTTAAAAGAGAAAGGTGATTTAATGAAGCTAGTTAATAAAAGATTGGGTTCAAACATTAATAAAGAGGAGGTGTTAGCAGTTATGATCAAGATGGCTTTGTTATGCACTAAAGTGACTGCAACATTTAGGCCAACCATGTCTGGAAGAACTATAGTTGAGGAAGTGGTTTCAGAGACAAGTGAGGTAGTAGACGAGAAAAAAATGGAGGCAATGAGACAATATTACCATGATCTAAGTATCTCAATAGAAGGACCTTGGGCACCTTCATCTACTTCATTCATATCTTCTTGCGAATCCATTGGCATGATCACAAGAGCAAGCATGAGAGTAAGTTACCCTCGTTTCTTCTCCCTTTTGCTCCTTGTCGCCTTTTGCTTTGCCTCCTCAGCTTCTGCCCAGCCCACTCTGTCCCCAGATGAAGTTGAAGCTCTGAGAGATATAGCTAAGACTCTTGGGAAGGATGACTGGGATTTCGATAACGTGGATCCGTGCAGTGGACAACGCAATTGGACATCCACAGTTCAAGTGAAAGGGAGTGAAAACAATGTCACATGCAATTGCAACTTTGTCAATAACACCGTTTGCCATGTCACCCACATACTTTTGAAATCACAAAATCTTCCCGGCACTCTCCCACGAGATCTCTTTAGGTTGCCTTACCTTCAAGAAATTGACCTTACTCGCAACTACTTAAACGGTACAATTCCTAAAGAATGGGGCTCCATGAAACTTGTCATCATGGTCTTGGAGGGCAATCAACTTTTTGGAAATCTTCCTCTCGAGCTTGGAAATCTAACCCAAATCCAAAGATTGTTACTTTCCTCCAACAATTTTACAGGAGAGTTACCAGTAACATTGTCCAAGCTCACTACATTGCAAGATATTCGAATTGGGGACAATCAATTTTCTGGGAAGATACCTGATTTTATTCAAAGTTGGACAAGTCTCCAAAAATTAGTGATTCAAGGGAGTGGATTAAGTGGGCCAATTCCTTCTGGAATTTCATCTCTGAAACAATTAACTGACTTGAGGATTAGTGATCTGAATGGATCTGAGCGTTCACCTTTTCCAATACTTGATGATATGAAGTTGAAATATTTGATTCTAAGGAATTGCAAGATCAATGGAACATTACCTGCATCTCTAGGGACAATGACAACTTTAAAAAACTTAGACCTTAGCTTTAACCAATTAACTGGGCCGATTCCAAGTACTTATGATGCCCTAAGAAAAGTGGATTACATATATTTAACTGGAAATCTTCTCAATGGACCAATACCTCCATGGACAGAGAAAGCTGAACATGTAGATATTTCATATAACAACTTTAGCATCTCACAAGGGAGTCGGACATGTCAAAATGGAAATGTGAACTTGTTTGCTAGCTCTACGACACACAATAACTTAGGAACAGTTGCATGTTTGGAAAGCAATGTCTGTCAAAAAATTTTGTACTCTCTTCATATAAATTGTGGTGGAAAGATAGCAACAATAAATAAAAGCACATATGATGATGATTTAGATAACGGAGGTCCTGCTAGATATTATCGGAGTGGAACAAAGAATTGGGCATTTGTCACTACTGGTAACTTTATGGATAATGAAGGTGGCGAGTACTCTACCTCGCAAAATAAAACTTCGCTTACCATGGATAATGCTGACCTTTACATGGATGCACGAGTTTCTCCTACTTCTCTTACGTACTATGGATTTTGTTTGGGAAATGGAAACTACACAGTTAATCTACATTTTGCAGAAATCATGTTCTTTAATGATAAAACATTTAACAGTCTAGGAAGGCGAATATTTGACATCTATATTCAGGGACAGTTGATGAAAAAGGATTTCAATATTGTAGAAGAAGCGGGAGGAATTGGTAACGCAATCATCAAACCATTTACTGTTGTTGTGACTAATAATACCTTGGAGGTTCGCTTGTATTGGGCTGGAAAAGGGACAACTAGTCTCCCATCTAGATCGGTATATGGTCCTCTTATATCAGCTATATCTGTGGAATCTGACTTTACACCTCCCTTGGAAAACGAAAGTAGCATATCTACAGGTGTTGTGGTTGGAATTGTAGCTGCAGTAGTAGTTATTATCATCCTCATACTGGCTATACTTTGGTGGAAAGGTTGTTTTGGAAAGAAAAGTTCTTTAGAAAAAGAGCTAATTGGTTTGGACCTACGAACTGGTTTATTTACTCTGAGACAAATCAAAACAGCAACAAATAACTTTGATGATGCCAATAAAATAGGAGAAGGAGGATTTGGTCCGGTGTACAAGGGACATTTATCGGATGGAACACTAATAGCAGTTAAACAACTTTCTTCTAAATCAAGACAAGGGAATCGTGAGTTTTTAAATGAGATAGGCATGATTTCTGCTTTGCAACATCCTCATCTTGTTAAACTTTATGGATGTTGTGTGGAGGGAGATCAACTATTGTTGGTATATGAATATATGGAAAACAATAGTCTTGCTCGTGCTTTGTTTGGTCCTGAAGAACACCAAATAAAGTTAGACTGGCCAACAAGATACAAGATATGTGTTGGAATTGCTAGAGGTTTGGCATACCTTCACGAAGAATCAAGACTAAAGATTGTTCATAGGGATATCAAGACCACTAATGTGTTGCTTGATAAAGATCTCAACCCAAAGATTTCTGACTTTGGTTTGGCTAAGCTTGATGAAGAAGACAATACTCATATTAGCACCCGAATAGCTGGAACATATGGATATATGGCTCCAGAATATGCCATGCATGATAAGGCTGATGTCTATAGTTTTGGTATTGTTACCTTGGAGATCATAAATGGAAGGAACAACACAATTCACCGACCAAAAGAAGAATCATTTTCTATTCTTGAATGGGCACATCTATTAAAAGAGAGAGGTGATATAATGGATCTTGTTGATAGAAGATTGGGTTTAGACTTCAACAAAGAAGAGGCGATAGTGATGATCAAGGTGGCTCTCTTATGCACTAATGTGACTACCACACTTAGGCCAGCCATGTCTTCAGTGGTAAGCATGCTAGAAGGAAATACTATTGTTGATGAAGTGTTTTCAGAGACAAGTGAGATATTGGATGAGAAGAAGTTGGAGAAGATGAGACAGTATTACCAAGAACTGAGTATCTCAAGGGAAGAGCCATGGACTGCTTCATCTACTTCTGTAGCAGATCTTTATCCTTGTTTGGATCCCATGGCAGTGCAAACGCTGAAGGAGATAGCCAAAACACTGGGTAAGGAGGATTTGAACTGCAGTGTACATCTATGTACCCAACACAGTATGGTTTGTTGCAGTTGCAAAATTCTCACTGACAACTTCTGCCATGTCGAGAAAATAATTCTGAAATCACAAAATCTTCAAGGCAGTCTTCCCCCACAACTGATGAAATTACCTTATCTCCAAGAGATTGATCTCAGCCGTAACTATCTTAATGGTACAATTCCTAGCGAATGGGGCTCCTCCAACCTACAAAAAATTTCTCTTCTTGCAAATCGACTAACTGGTCCAATCCCAAAAGAGCTGGGAAACCTCAGCAATCTTACACGCTTGATCCTTGAGTTCAATCAACTCTCTGGAAATCTTCCTCCAGAACTTGGGGACCTTGTCCAAATTGAAAAACTGCATTTAAGCTCCAACAACTTCACCGGTCAGTTGCCAGCAAATCTTTCAAGGCTTACTTCAATGAAGGAATTGTATGATGTTAAATCTCTACATATAAATTGTGGTGGAAAACAGATTGTTATCGGAAATGTAACATATGATGAAGATATAGATCCAGCTGGACCAGCAATATATAAACAAAGTACAAACAATTGGGCATTTAGCAACACAGGCAACTTCATGGACAATGATACTTTTCCTGAAGAACATCTTCTACCCTATACCACAGAAAATGAAACTACGCTTTATATGAATAATGCTGAATTGTATAAACATGCACGTATTTCCCCCATGTCTTTGACTTATTATGGATATTGCCTAGAAAATGGAAACTACACAGTAAGGCTCCACTTTGCTGAGATAATGTTCGCTGATGATAAGACATATAACAACTTAGGAAGGCGTCTATTTGATGTATACATTCAGGGAGAGCTAGTACTGAAGGATTTCAACATTGCAAAGGAAGCACAAGGAGTTGGAAAGGAACTCATAAAACTATTTCTTGCTCATGTGAGTAGTAATGACTTAGAGATCCGCTTCTATTGGGCTGGCAAAGGGACAACATACGTCCCATATAAATCAGTTCATGGTCCTCTTATATCTGCCATTTCTGTTAATCAGTATGGTCCGTTACCAGGTCTAATAAAAAAAGAGACAGATTCTGCAGGTGGCAAGTCTGTAAGAGTTATTGTTGCAATTGTAGTTCTGTCAGTGATCGTGGTCATCTTGATTGTTGCTAGCATAGTTTGGTGGAAAGGTTTCATTAGTGATTGTTGTAAAGGGTTATTTTCAATCTCAAACTTGGTGCCTTACTTTGGTGGAAAGAAACATTTATCAATGAAAGAGCTCGAGGATTTAGATCTACAAACTGGTGCATTTACATTACATCAAATCATAGCTGCAACAAATAACTTTGATGTTTGTAATAAAATTGGAGAAGGAGGTTTTGGTCCTGTTTATAAGGGCATTTTATCAAATAACAAATCAATAGCAGTCAAACAACTTTCACCCAAATCAGAGCAAGGAACCCGTGAGTTTATAAATGAGATCGGCATGATCTCTGCTTTGCAACATCCTAATCTTGTTAAACTATATGGTTGTTGTGTTGAGGGAGATCATTTGTTGTTGGTATACGAATATATGGAGAACAATAGTCTTGCAAATGCTTTATTTGGAGACAATCATTTAAAATTGAATTGGCTAACAAGGCAAAAGATTTGTGTTGGTATTGCGAGAGGTTTAGCCTTCATGCATGAAGAATCAAGACTAAAAGTTGTTCACAGGGACTTAAAAACCTCAAATGTATTGCTTGACGAAGACTTGAAACCAAAAATATCTGATTTTGGTTTGGCTAGGCTTAATGAGAAAGACAATACTCACATAAGTACTAAAATTGCAGGAACTTGGGGATATATGGCTCCGGAATATGCGATGCATGAAATCATAAGTGGAAAGAGAAACACTATTCACTGGTCAAGGGGCGAAGCGTTCTATCTTCTTGATTGGGCACGTTTGTTGAGAGACAAAGGAGACATAATGGAGCTAGTTGATTCAAGGTTGGGTTTAGATTTCAATGAAAAGGAGGTAATGTTGATGGTCAAAGTGGCTCTCCTATGCACCGATGTCACTTCAAAGCTTAGGCCCTGCATGTCTTCAGTGCTAAGCATGCTTGAGGGCAGAACAATGGTCCCAGAATTTGTTGCAAATTCAAGTGAGGTAATGGACGAGATGAAGTTGGAGGTAATGAGAGAGTTTTACAGTCAAATGGAAGAAAACAGAATAAGTGAAGCACAAGGTCTGAGCTTGACAATTGATGCTCCATGGACTGGGACTGGTTCATCTTCATCAGCTGCAGACCTCGGCCGAGCTCACCTTAATGCTTGGTATTGGCAGAAAAAGAAATTGAAAGAT 6175 0.384 MTTIKESTYDDDLDVGGPTTFHHNGIKNWALITTGTFMDKGVGDYYKYSNIFSDFLDLLWILPGQWKLHSKSTLCRNHDQTFNSLGSWIFVRQMGKLVQKDFNIVEVAGGIGKATVKSFMAIGFGIPHEESRLKVFHRDFKSNNVLLDKDLNPKIYDFGLAKLDEEENTHMSIGITGTYKYMARLLKEKGDLMKLVNKRLGSNINKEEVLAVMIKMALLCTKVTATFRPTMSGRTIVEEVVSETSEVVDEKKMEAMRQYYHDLSISIEGPWAPSSTSFISSCESIGMITRASMRVSYPRFFSLLLLVAFCFASSASAQPTLSPDEVEALRDIAKTLGKDDWDFDNVDPCSGQRNWTSTVQVKGSENNVTCNCNFVNNTVCHVTHILLKSQNLPGTLPRDLFRLPYLQEIDLTRNYLNGTIPKEWGSMKLVIMVLEGNQLFGNLPLELGNLTQIQRLLLSSNNFTGELPVTLSKLTTLQDIRIGDNQFSGKIPDFIQSWTSLQKLVIQGSGLSGPIPSGISSLKQLTDLRISDLNGSERSPFPILDDMKLKYLILRNCKINGTLPASLGTMTTLKNLDLSFNQLTGPIPSTYDALRKVDYIYLTGNLLNGPIPPWTEKAEHVDISYNNFSISQGSRTCQNGNVNLFASSTTHNNLGTVACLESNVCQKILYSLHINCGGKIATINKSTYDDDLDNGGPARYYRSGTKNWAFVTTGNFMDNEGGEYSTSQNKTSLTMDNADLYMDARVSPTSLTYYGFCLGNGNYTVNLHFAEIMFFNDKTFNSLGRRIFDIYIQGQLMKKDFNIVEEAGGIGNAIIKPFTVVVTNNTLEVRLYWAGKGTTSLPSRSVYGPLISAISVESDFTPPLENESSISTGVVVGIVAAVVVIIILILAILWWKGCFGKKSSLEKELIGLDLRTGLFTLRQIKTATNNFDDANKIGEGGFGPVYKGHLSDGTLIAVKQLSSKSRQGNREFLNEIGMISALQHPHLVKLYGCCVEGDQLLLVYEYMENNSLARALFGPEEHQIKLDWPTRYKICVGIARGLAYLHEESRLKIVHRDIKTTNVLLDKDLNPKISDFGLAKLDEEDNTHISTRIAGTYGYMAPEYAMHDKADVYSFGIVTLEIINGRNNTIHRPKEESFSILEWAHLLKERGDIMDLVDRRLGLDFNKEEAIVMIKVALLCTNVTTTLRPAMSSVVSMLEGNTIVDEVFSETSEILDEKKLEKMRQYYQELSISREEPWTASSTSVADLYPCLDPMAVQTLKEIAKTLGKEDLNCSVHLCTQHSMVCCSCKILTDNFCHVEKIILKSQNLQGSLPPQLMKLPYLQEIDLSRNYLNGTIPSEWGSSNLQKISLLANRLTGPIPKELGNLSNLTRLILEFNQLSGNLPPELGDLVQIEKLHLSSNNFTGQLPANLSRLTSMKELYDVKSLHINCGGKQIVIGNVTYDEDIDPAGPAIYKQSTNNWAFSNTGNFMDNDTFPEEHLLPYTTENETTLYMNNAELYKHARISPMSLTYYGYCLENGNYTVRLHFAEIMFADDKTYNNLGRRLFDVYIQGELVLKDFNIAKEAQGVGKELIKLFLAHVSSNDLEIRFYWAGKGTTYVPYKSVHGPLISAISVNQYGPLPGLIKKETDSAGGKSVRVIVAIVVLSVIVVILIVASIVWWKGFISDCCKGLFSISNLVPYFGGKKHLSMKELEDLDLQTGAFTLHQIIAATNNFDVCNKIGEGGFGPVYKGILSNNKSIAVKQLSPKSEQGTREFINEIGMISALQHPNLVKLYGCCVEGDHLLLVYEYMENNSLANALFGDNHLKLNWLTRQKICVGIARGLAFMHEESRLKVVHRDLKTSNVLLDEDLKPKISDFGLARLNEKDNTHISTKIAGTWGYMAPEYAMHEIISGKRNTIHWSRGEAFYLLDWARLLRDKGDIMELVDSRLGLDFNEKEVMLMVKVALLCTDVTSKLRPCMSSVLSMLEGRTMVPEFVANSSEVMDEMKLEVMREFYSQMEENRISEAQGLSLTIDAPWTGTGSSSSAADLGRAHLNAWYWQKKKLKD 2047
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g02182 2047 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1835 1847 IPR008271 GO:0004672|GO:0006468
Pste3g02182 2047 Gene3D - 669 859 - -
Pste3g02182 2047 Gene3D - 1426 1618 - -
Pste3g02182 2047 ProSiteProfiles Protein kinase domain profile. 1 300 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g02182 2047 SUPERFAMILY Protein kinase-like (PK-like) 133 183 IPR011009 -
Pste3g02182 2047 SUPERFAMILY L domain-like 356 623 - -
Pste3g02182 2047 Gene3D Transferase(Phosphotransferase) domain 1 120 186 - -
Pste3g02182 2047 Gene3D Transferase(Phosphotransferase) domain 1 1007 1214 - -
Pste3g02182 2047 Pfam Malectin domain 1426 1613 IPR021720 -
Pste3g02182 2047 Pfam Malectin domain 671 854 IPR021720 -
Pste3g02182 2047 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 900 1006 - -
Pste3g02182 2047 FunFam Leucine-rich repeat receptor protein kinase EMS1 1342 1429 - -
Pste3g02182 2047 CDD STKc_IRAK 937 1200 - -
Pste3g02182 2047 Gene3D Ribonuclease Inhibitor 313 666 IPR032675 -
Pste3g02182 2047 Gene3D Ribonuclease Inhibitor 1281 1425 IPR032675 -
Pste3g02182 2047 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 1424 1618 - -
Pste3g02182 2047 ProSiteProfiles Protein kinase domain profile. 931 1208 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g02182 2047 SUPERFAMILY Protein kinase-like (PK-like) 916 1207 IPR011009 -
Pste3g02182 2047 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 1684 1790 - -
Pste3g02182 2047 SUPERFAMILY Protein kinase-like (PK-like) 1698 1981 IPR011009 -
Pste3g02182 2047 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 669 859 - -
Pste3g02182 2047 SMART serkin_6 931 1196 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g02182 2047 SMART serkin_6 1715 2019 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g02182 2047 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 123 183 - -
Pste3g02182 2047 SUPERFAMILY L domain-like 1286 1422 - -
Pste3g02182 2047 FunFam Putative LRR receptor-like serine/threonine-protein kinase 1007 1210 - -
Pste3g02182 2047 ProSitePatterns Serine/Threonine protein kinases active-site signature. 135 147 IPR008271 GO:0004672|GO:0006468
Pste3g02182 2047 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1053 1065 IPR008271 GO:0004672|GO:0006468
Pste3g02182 2047 FunFam Putative LRR receptor-like serine/threonine-protein kinase 1791 1979 - -
Pste3g02182 2047 Gene3D Transferase(Phosphotransferase) domain 1 1791 1984 - -
Pste3g02182 2047 Pfam Protein kinase domain 133 183 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g02182 2047 Pfam Protein kinase domain 933 1135 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g02182 2047 Pfam Protein kinase domain 1717 1891 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g02182 2047 Gene3D Phosphorylase Kinase; domain 1 1683 1790 - -
Pste3g02182 2047 Gene3D Phosphorylase Kinase; domain 1 900 1006 - -
Pste3g02182 2047 FunFam Probable LRR receptor-like serine/threonine-protein kinase RFK1 327 491 - -
Pste3g02182 2047 ProSiteProfiles Protein kinase domain profile. 1715 2019 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g02182 Pste-Chr3 15229833 15273865 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g02182 120 261 Receptor kinase-like Gene Family AT1G53420 38.000 3.92e-27 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pste3g02182 Pkinase 3e-41 CL0016