Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g02179 GCCAAGCGTATGCCAGGGAACAATTATAACTGCTCCCCTTTAACACCAAGGTCTAGATTGGAAAGGCTTCTTAGGGAAAGAGAGCTAAGAAAATCTTTCAAGCATATTCAACCAACTGAAGAAGCAAGAGATGGCAACAAAGACGGAGAACAATCATTTGGTGATTCATGCATAGGTGATAATGAATTTTCTGGTATTCATAAAGAGGAAGAGGTCCCCGAAACCAATGCAGATAGAAGCCAAAGGCAAGATGAGCGGCCAAGCAAACAACGTTTGTTGGTGGTCGCTAACAGGTTGCCTGTGTCTGCTGTTAGGGAGAGTGTTGAGTCATTTCACCTTAAGATCAGTGTAGGCGGGCTAGTCAGTGCACTTCTAGGCAAGACAAATTGTATGAAGCTTGTTGTTTCTGTTGAAGGTGTAAAGGAGTTTGATACCAGATGGATTGGTTGGGCTGGAGTGAATGTGCCTGATGGTATTGGGCAGAGAGCATTGACTAAAGCTTTAGCTGAAATGCGATGTATACCAGTATTTCTTGATGAGGAGATAGTTAATCAGTACTATAATGGCTACTGCAACAACATATTATGGCCTCTATTTCATTACCTTGGGCTTCCACAAGAAGATCGACTTGCTACCACTCGTACTTTCCAATCCCAGTTTGATGCATATAAGAAGGCAAACCAAATGTTTGCTGATGTAGTTAATGAGCACTATGAGGAAGGAGATGTTGTTTGGTGCCATGATTACCACCTAATGTTCCTTCCAAAATATCTGAAAAAATACAATGATAAAATGAAAGTTGGCTGGTTTCTCCATACACCCTTTCCTTCCTCAGAAATACACAGGACTCTACCATCTAGAACAGACTTGTTGAGATCTGTACTTGCAGCTGATCTGGTGGGATTCCATACCTATGATTATGCAAGGCATTTTGTTAGTGCTTGTACTCGTATTCTGGGGCTCGAGGGCACACCTGACGGAGTAGAAGATCAAGGGAAGTTAACACGCGTGGCTGCGTTTCCTATTGGGATTGACTCTGATAGATTCATTCAAGCCCTTGAACTCCCTGAAGTCCAGGATCACATGAAAGAGCTGAAAGAAAGATTTGCAGACCGAAAGGTAATGCTGGGTGTCGATCGTCTTGATATGATAAAAGGAATTCCCCAGAAAATCTTGGCATTTGAAAAGTTCCTCGAGGAGAATTCACACTGGCGTGATAAAGTTGTCTTGCTTCAAATTGCTGTTCCTACTAGGACAGATGTTCCTGAATATCAAAAGCTTACATGCCAAGTGCATGAGATTGTAGGACGAATTAATGGAAGATTTGGAACACTTACAGCGGTCCCAATTCACCATCTGGACCGGTCTCTTGAGTTTCATGAATTATGTGCACTCTATGCTGTAACTGATGTAGCACTTGTTACATCTTTAAGGGATGGAATGAATCTTGTCAGCTATGAATTTGTTGCATGTCAAGCATCCAAGAAGGGGGTTCTCATTTTAAGTGAGTTTGCAGGTGCAGCACAGTCTCTTGGTGCTGGTGCTATCTTGGTAAATCCATGGAACATCACAGAGGTTGCTGCTTCTATTGGTTATGCATTGGAGATGCCAGCTGATGAAAGAGAAAAACGGCATCAGTTTAATTTCAAACATGTGAAGACTCATACGTCACAAGAATGGGCTGCAACTTTTGTGAGTGAACTGAATGATACCATTGTTGAAGCTCAGCTTAGGACAAGACAAGTTCCTCCATTACTTCCCAACAAAGTGGCCATTGATTGTTACTCAAAATCCAATAATAGATTAATCATACTGGGTTTTAATTCCACTTTGACTGAAGCAGTGGATGCCCTTGGAAGGGGTGGTCAAATTAAAGAACTAGAACCTAAATTACACCCAAATCTGATAGAACCTTTAAAGAAGTTATCCGATGATCCACAGACAACAATAGTTGTTCTGAGTGGGAGCGATCGAGCAGTCCTGGACAAAAACTTCAGTGAATTTAATATGTGGTTGGCAGCTGAAAATGGGATGTTTTTGCGGCGTACTTCAAGTGAGTGGATGACAACTATGCCTGAAAATTTAAACATGGATTGGGTTGATAGCGTCAAGCATGTTTTTGAGTATTTTACCGAAAGAACTCCACGGTCTCATTTTGAGCTTCGTGAGACTTCAATAGTATGGAATTACAAGTATGCAGATGTTGAGTTTGGAAGGATTCAAGCAAGAGATCTGCTACAACATCTGTGGACAGGGCCAATATCAAATGCATCTCTTGATGTTGTTCAAGGTAGTCGATCAGTTGAAGTCCGTGCAGTTGGTGTGTCAAAGGGTGCAGCTATCGATCGTATCCTGGGAGAGATAGTTCATAACAAAGGCATGAAAGAACCAATTGACTATGTCCTATGCATTGGGCACTTCCTAGCCAAGGATGAAGATGTGTATAAATTTTTTGAGCCAGAGCTCCCTTCTGAACCAACTCCAGTAGCAAGAGCTATGCTTTCCAAATCCAATTCTTACAGGCCATCTTCTCTGCCAAAAATTACAACCACCAAAACCGGGTCTAAGGCACCTAAATACAAGAAACAACGTTCATTATCAAACATAGAAAGGAGAGAAATTGATCAATGGAAACCACCATGTCGTGATAGAATATCACTGAATGAGGGTTCCTCAGTGCTTGATCTAAAAGGTGATAATTACTTCTCTTGTGTTGTCGGACGGAAAAGATCAAGTGCGCGTTACCTTCTTAAAACCTCAGATGATGTTGTCAACCTCATAAATGACTTGGCGGAATAATTTTCATCCCCAAAAAACTTGACTGATAGTTTTCTTGTTATATTGTAATTTCATGGTTAAGTGTCTATTAATGTTGAGTGGTTCTGCAAGCCTTACATGTCTCATTGCTAGGCATAACCTGACTAATATTTGTAACTAGGACTAGCATGCAGTAATCATACATTGACAATTACATGACCTTGTCATTTGAATGAATGCTCAAGCTGGCGACATACTTTTAGC 3021 0.4118 AKRMPGNNYNCSPLTPRSRLERLLRERELRKSFKHIQPTEEARDGNKDGEQSFGDSCIGDNEFSGIHKEEEVPETNADRSQRQDERPSKQRLLVVANRLPVSAVRESVESFHLKISVGGLVSALLGKTNCMKLVVSVEGVKEFDTRWIGWAGVNVPDGIGQRALTKALAEMRCIPVFLDEEIVNQYYNGYCNNILWPLFHYLGLPQEDRLATTRTFQSQFDAYKKANQMFADVVNEHYEEGDVVWCHDYHLMFLPKYLKKYNDKMKVGWFLHTPFPSSEIHRTLPSRTDLLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPDGVEDQGKLTRVAAFPIGIDSDRFIQALELPEVQDHMKELKERFADRKVMLGVDRLDMIKGIPQKILAFEKFLEENSHWRDKVVLLQIAVPTRTDVPEYQKLTCQVHEIVGRINGRFGTLTAVPIHHLDRSLEFHELCALYAVTDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQSLGAGAILVNPWNITEVAASIGYALEMPADEREKRHQFNFKHVKTHTSQEWAATFVSELNDTIVEAQLRTRQVPPLLPNKVAIDCYSKSNNRLIILGFNSTLTEAVDALGRGGQIKELEPKLHPNLIEPLKKLSDDPQTTIVVLSGSDRAVLDKNFSEFNMWLAAENGMFLRRTSSEWMTTMPENLNMDWVDSVKHVFEYFTERTPRSHFELRETSIVWNYKYADVEFGRIQARDLLQHLWTGPISNASLDVVQGSRSVEVRAVGVSKGAAIDRILGEIVHNKGMKEPIDYVLCIGHFLAKDEDVYKFFEPELPSEPTPVARAMLSKSNSYRPSSLPKITTTKTGSKAPKYKKQRSLSNIERREIDQWKPPCRDRISLNEGSSVLDLKGDNYFSCVVGRKRSSARYLLKTSDDVVNLINDLAE 932
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g02179 932 MobiDBLite consensus disorder prediction 62 89 - -
Pste3g02179 932 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 90 572 - -
Pste3g02179 932 Pfam Trehalose-phosphatase 630 824 IPR003337 GO:0003824|GO:0005992
Pste3g02179 932 NCBIfam alpha,alpha-trehalose-phosphate synthase (UDP-forming) 91 569 IPR012766 GO:0003825|GO:0005992
Pste3g02179 932 SUPERFAMILY HAD-like 601 930 IPR036412 -
Pste3g02179 932 CDD HAD_TPP 602 821 - -
Pste3g02179 932 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 80 931 IPR001830 GO:0003824|GO:0005992
Pste3g02179 932 MobiDBLite consensus disorder prediction 31 89 - -
Pste3g02179 932 CDD GT20_TPS 91 569 IPR001830 GO:0003824|GO:0005992
Pste3g02179 932 MobiDBLite consensus disorder prediction 31 50 - -
Pste3g02179 932 Pfam Glycosyltransferase family 20 91 569 IPR001830 GO:0003824|GO:0005992
Pste3g02179 932 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 693 773 - -
Pste3g02179 932 Gene3D Glycogen Phosphorylase B; 82 350 - -
Pste3g02179 932 Gene3D - 693 773 - -
Pste3g02179 932 Gene3D Glycogen Phosphorylase B; 351 554 - -
Pste3g02179 932 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1-like 351 554 - -
Pste3g02179 932 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 83 350 - -
Pste3g02179 932 Gene3D - 630 787 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g02179 Pste-Chr3 15204798 15212129 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g02179 4 932 Trehalose Biosynthesis Gene Families AT1G78580 73.201 0.0 1370
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g02179 3 15204798 15212129 Pste3g02179 3 15204798 15212129 ECH