Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g02175 ATGAAGATGACTTCTTTCCTATTACTCCTCCTTTCACTCCTTGCTTTGTGGTTTCCATCGCTTGCTTTTGGAGCAAATACCACTCACCCAGATGAAGTGCAAGCCCTGAAAGATATCGCCAACACCCTTGGTAAAAAGGATTGGGACACCAATATAGATCCATGCAGTGAACAATCTCCGTGGGTTACGGATGCTCAGAACGACAACGTCACCTGCAATTGCTCTATCCCTGGAGACAACTTCTGCCATGTTGTCACAATATTGTTGAAATTACAAAATCTCCAAGGCAAGCTCCCACTTGAACTCACAAGGTTGCCTTACCTCGAAGTAATTGACCTCACTCGTAATTTCCTTAACGGTACAATACCTAAGGAATGGGGCTCCTCGAATCTTCGCGTTGTTTCTCTTCTTGGAAATCGACTATCGGGTCCAATCCCAAAAGAAATAGGAAGCATCACCACACTCGAAAGTTTGGTCTTGGAATTCAATCAATTCTCTGGAAAGCTCCCGCCAGAACTTGGAAACCTTCCTCGCATTCAAAGACTGCATCTTACCTCTAATTACTTTACCGGAGAGCTTCCTGAAACTTTGGCTAAACTTACAACATTGACAGAACTCCGACTTAGTGATAATCAATTCTCGGGAAAGATACCTGATTTTATTCAAAGATGGACAAATCTTCAAATACTAGCAATTCAAGCGAGTGGTTTAAGTGGGCCAATTCCTTCTGGAATTTCATTGCTGCGAAACTTAGAAGACTTGAGAATTAGTGACTTGAATAATGGATCTGATTCTACTTTTCCACCGGTTAATGATATGACAAAATTGAAAACATTAATACTAAGAAGCTGCCATATTAATGATACATTACCTCAGTATCTTGGGATCAAGGCAAACTTTAATACCTATAATTCTATCCATATAAATTGTGGTGGAGGAGAAATAATTAAGGGAGATATAAGATATGAAGATGATGATAAATTTAATGTAGGACCATCAACATCTATGGAAGGGGGAGAAAACTGGGTACTTAGCAACACCGGTCACTTCCTGAATCATGTTGATAATGGAACAACATATACGACCACTCTTAAAAATAAAAATACACTTTCAGAACTGTATCAGACTGCACGTATATCTCCCTCTTCTCTGACTTATTATGGATTTTGTCTGGAAAATGGAGACTACACAGTACTACTCCATTTTGCAGAAATAATGTTCACTGATGATGACACATATAACAGCTTAGGGAGGCGTATATTTAATGTTGACATTCAGGGAAAACAAGTATTGAAGGATTTCAATATTGCAAATAAAGCAGGAGTTAGAAAGAATATTACAACAGAATTTCATACTCAAGTGAGTAATAAATCTTTAGAAATCCGGTTTTACTGGGCGGGAAAAGGGACAACTGCCATGCCATATGCATCAATATATGGTCCTCTTATATCAGCTATATCTATTACTCGTGACTCCACAAGTGACAACATATCTCCAGGGACTATAGTTGGAATAGTAGTTGCAACAATTGTTCTTGCAATACTGCTTGTACTTTTGTGGAGAGTTTATATTGGAAAAAGAAATTCATTAGCAAAAGAGTTAAAGGATTTAAATCTACAAACCAGTGTATATACTTTCCGTCAAATCAAAGTTGCAACAAATAACTTTGATATTTCTAATAAGATTGGAGAAGGAGGCTTTGGTCCTGTTTATAAGGGCATTTTATCGAATGACACAATAATAGCTGTCAAGATGCTTTCATCCAAGTCAAAGCAAGGAAATCGTGAGTTTTTAAATGAAATAGGCATGATTTCAGCTTTGCAACACCCTTGTCTTGTCAAACTATATGGTTGTTGTGTTGAGGGAGATCAATTGTTGCTAGTATATGAATATATGGAGAACAATAGTCTTGCAAAAGCTTTATTTGGCAGGGAAGAATCTCCTTTAAAATTGGATTGGCCAACACGATATAAGATTTGTGTTGGTATTGCTAGAGGTTTGACTTTCTTACATGAAGAGTCAAGATTAAAAATTGTTCATAGGGATATTAAGGCTACTAATGTATTGCTAGACAAAGATTTGAATCCAAAGATATCGGATTTTGGTTTAGCCAAGCTCGATGAGGAGGATAATACTCACATAAGCACAAAAATAGCCGGAACTTATGGATATATGGCTCCAGAATATGCAATGCATGGTTATTTAACCGACAAAGCAGATGTTTATAGTTTTGGAATTGTTGCCTTGGAAATTGTGTCTGGAAAGAACAATATTGTCCACAAACCTAGACAAGAAACATTGCATCTTTTAGATTGGGCACGCTTATTGAAAGATAAAGGTAACTTAATAGAGCTAGTTGATCCAAGGTTAGGTTCAGATTTCAACAAATATGAGGTAATGATGATGATAAAAGTCGCTCTTTTATGCACCAATGCCACTTCAAACCTTAGACCAACCATGTCATCTGTGCTTAGCATGCTTGAAGGAAAAATTGTGATTCCAGAATTCATTTCAGATCCACATGAAATAATGGATGAAATAAAATTAGAGAAAATGCGACAACATTACTTTCAAGTAGAAGAAGATGAGAGAAGTGAAACACAAGCAAAGAGTCATAAATTGGCAATTGAAGGACCATGGACTACTTCATCTTCTTCGACTTCTGATCTATATCCTGTCCACATTGATTCTTCCTATTGGGAGAAAAGAAATTAGGTGTATGTTTAAATTCAAATATTTGGGTGGTATTCGTTCTCCTTTCATACTAATTTTTCTTCTTAAACCATAATTTCGT 2794 0.3679 MKMTSFLLLLLSLLALWFPSLAFGANTTHPDEVQALKDIANTLGKKDWDTNIDPCSEQSPWVTDAQNDNVTCNCSIPGDNFCHVVTILLKLQNLQGKLPLELTRLPYLEVIDLTRNFLNGTIPKEWGSSNLRVVSLLGNRLSGPIPKEIGSITTLESLVLEFNQFSGKLPPELGNLPRIQRLHLTSNYFTGELPETLAKLTTLTELRLSDNQFSGKIPDFIQRWTNLQILAIQASGLSGPIPSGISLLRNLEDLRISDLNNGSDSTFPPVNDMTKLKTLILRSCHINDTLPQYLGIKANFNTYNSIHINCGGGEIIKGDIRYEDDDKFNVGPSTSMEGGENWVLSNTGHFLNHVDNGTTYTTTLKNKNTLSELYQTARISPSSLTYYGFCLENGDYTVLLHFAEIMFTDDDTYNSLGRRIFNVDIQGKQVLKDFNIANKAGVRKNITTEFHTQVSNKSLEIRFYWAGKGTTAMPYASIYGPLISAISITRDSTSDNISPGTIVGIVVATIVLAILLVLLWRVYIGKRNSLAKELKDLNLQTSVYTFRQIKVATNNFDISNKIGEGGFGPVYKGILSNDTIIAVKMLSSKSKQGNREFLNEIGMISALQHPCLVKLYGCCVEGDQLLLVYEYMENNSLAKALFGREESPLKLDWPTRYKICVGIARGLTFLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEEDNTHISTKIAGTYGYMAPEYAMHGYLTDKADVYSFGIVALEIVSGKNNIVHKPRQETLHLLDWARLLKDKGNLIELVDPRLGSDFNKYEVMMMIKVALLCTNATSNLRPTMSSVLSMLEGKIVIPEFISDPHEIMDEIKLEKMRQHYFQVEEDERSETQAKSHKLAIEGPWTTSSSSTSDLYPVHIDSSYWEKRN 904
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g02175 904 MobiDBLite consensus disorder prediction 861 889 - -
Pste3g02175 904 Gene3D Ribonuclease Inhibitor 193 306 IPR032675 -
Pste3g02175 904 ProSitePatterns Serine/Threonine protein kinases active-site signature. 678 690 IPR008271 GO:0004672|GO:0006468
Pste3g02175 904 Gene3D Phosphorylase Kinase; domain 1 522 631 - -
Pste3g02175 904 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 525 631 - -
Pste3g02175 904 Pfam Protein tyrosine and serine/threonine kinase 558 771 IPR001245 GO:0004672|GO:0006468
Pste3g02175 904 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g53420 29 260 - -
Pste3g02175 904 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 303 491 - -
Pste3g02175 904 Gene3D Transferase(Phosphotransferase) domain 1 632 835 - -
Pste3g02175 904 ProSiteProfiles Protein kinase domain profile. 556 837 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g02175 904 Pfam Malectin domain 305 486 IPR021720 -
Pste3g02175 904 SMART serkin_6 556 827 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g02175 904 Gene3D - 307 493 - -
Pste3g02175 904 Gene3D Ribonuclease Inhibitor 31 192 IPR032675 -
Pste3g02175 904 SUPERFAMILY Protein kinase-like (PK-like) 540 843 IPR011009 -
Pste3g02175 904 CDD STKc_IRAK 562 829 - -
Pste3g02175 904 FunFam Putative LRR receptor-like serine/threonine-protein kinase 632 839 - -
Pste3g02175 904 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 11 865 - -
Pste3g02175 904 SUPERFAMILY L domain-like 61 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g02175 Pste-Chr3 15193388 15214372 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g02175 23 869 Receptor kinase-like Gene Family AT1G53420 49.529 0.0 844
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pste3g02175 PK_Tyr_Ser-Thr 1e-48 CL0016