Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g02174 GAAGGCAATAGATTATAGATCCCATTGGCGCTAGCTTGGATCCACAGGCACCTCTTTACTCTTCACTAATTAATCACTAATCAGTATCATATATAACCCTACCTTTTCATCAATCCCATTCAGTTAAGGGTTTCTGAATTATAATTCCTTCCTCTGAGGGCACAGGGCTATGTTGACAGCGCCTTAGCTCCTATCTCCAATGACTCTCCAGAACGATTAACCCTTTGTTTGTGCAAAACCCGTTCCGCTAAGAACACTGCCACCATGCCTCGTAAAGTAAATTATGGACTCCATTATGATGACGATTACTATGATGATGACTATGACGACTACGCTTACGATGACGCCGATGCAGAAGCAGAAGACTATGGAGGACCTGAAACAAAGCAAGAGACCAATAAGCTCGGGCTTTGGCAATGCTCCATTTGTACTTATGACAATGATGAGAGTATGACATTTTGTGATATTTGTGGTGTTGTACGTCATCCCTCGGTTAACAATGGAATTTCCAACAGTAGCAAAACAGTTGAAGACATAAGCAAAAGTCCTGGAGTGTCCAAGTTGGCCCGGTCTCTTTTTCAGTCATTACCACAACAGATTCCCAAAGAGGTTGTATTATTTCCAAAGCCGGGTGATGATTTTCTGACAGATGACAGTAACTTCTACAAGCTTGAGAATGTCCAAGGAGAATTTCATGAAATCCATAAGGCTTTTAGTACTCGAAGCAATCCACATTTAAGCATAGATCCTTTCAAGTTCGATGTTCCATCCCCAGATGATGTGGTTCATACTGGTCTACATTCTTCCAAAATGGGTTTGAAAGACAAAGTTACAAACACTAGAATTTCTCAGCGTTCATCAAGCAACAGAGAAAAGAATGAACTTTCTGTACAATCAAATGCTGAAAGCTCAGACAACTTATCATCCTTAATGCAAAAGGCCAGACAGGATAGTTCAGCTGAGGGCAAGCTTTCCAAAAATATAGCAATTGATCTGCAAACAACTAGTAAAGCTTCAAGCAGCTTGGCAGAAAATTTGTCAAAAGATAAAGGTGAAAAGATTAATAAAATAAATTCTTCAAAAAATGTTGCAAGAATTCAATCAAGCAAAGAAAAGTCAGGTAGCTTGTCTGCAGTGTCAAAAGACAAGGAAAGTGATAAAATTAGTTTGTCTTCTATCAAAGTTGGAAAAGCTGAAAGTATTTCTGGCAGTTTCAACAACATGGTTCTTGATGTAAGATCTGGAAATTCTGATAAAACTAATGCTAAAGGACCTCGTTCACATGTTTCTTATAAGCCAGAAAATTGGATGCTCCCTCAGCAAGCTGCAGATACATTGACTCAGCTGAATCTTGCTATTGTTGGCCATGTTGATTCTGGAAAATCAACTCTATCTGGTAGGCTACTGCACCTATTGGGACGTATTTCCCAGAAAGAAATGCACAAATATGAAAAGGAGGCCAAGTTACAGGGCAAGGGATCCTTTGCTTATGCTTGGGCACTCGATGAAAGTTCCGAAGAAAGGGAAAGGGGAATAACTATGACAGTGGCTGTTGCTTATTTTGACACCAAGAAATATCATGTTGTTGTGCTTGACTCCCCTGGTCATAAAGATTTTGTCCCAAATATGATTTCTGGGGCAACACAAGCTGATGCTGCAATTCTTGTTATAGATGCTTCACTTGGTTCATTCGAAGCTGGTATGGATGGTAGCAAAGGGCAAACAAGGGAGCATGCACAACTTATCAGAAGCTTTGGTGTTGACCGGGTTATAGTTGCTGTGAATAAGATGGATGTTGTTGCATACTCCAAAGATCGGTTTGATTTTATAAGGCAGCAGCTGGGAGTTTTTCTCCACTCATGTGGTTTCAAAGGTTCTTCTCTATCTTGGATTCCCATGAGTGCCATGGAAAATCAAAATTTGGTGGCACCCCCTTCTGATGCTAGTTTCAAAAACTGGTATGGTGGACCTTATCTGTTAGATGCAATTGACTCCCTTGAACCTCCTACTAGAGAATTCTCAAGACCTTTACTAATGCCAATATGTGATGTCATCAAATCAACTACGCTTGGACAGGTGTCTGCCTGTGGTAAACTGGAAGCAGGAGCTCTTCGGAGTGGATCAAAGGTCTTAGTTATGCCCTCAGTTGTTGTGGGAACAGTGCGGTCACTGGAGCGTGACTCTAATGCTTGTACAATTGCAAGAGCTGGAGATAATGTGGCTGTAACATTGCAAGGTGTAGATGGAAATCATGTGATGGCAGGAGGTGTACTATGCCATCCAGACTTTCCTGTTGCAGTTGCTAAGCATTTGGAGTTGAAAGTTCTAGTTTTGGAGGGTGCAAGTCCGATATTGGTGGGCGCACAGTTAGAGTTTCATATACACCATGCGAAGGAGCCTGCTAGAGTTTCTAGAATATTATCAGTACTTGATCCCAAGACCGGTAAGGTGACCAAAAAGTCTCCACGCTGTCTTACTGCAAAGCAAAGTGCAGTAGTTGAGGTGGTTTTGCATGAGTCAGTCTGTGTGGTAGAGTTCTCTGGTTGTAAAGCTCTTGGAAGGGTGTCTTTAAGATCACTGGGAAGAACAATTGCTGTTGGAGTTGTGACAAGAATAATCGAAGAACAAGGTTAATTTATGAAATCATCAAATAAGCTAAATGATGATAGCAAGGAGGGGTTCTCAACATACCATGTATCTTTGTTTGCCACCCTAGTCTAGATTAGATTAAATTATGCTCCTAGACAACGGGCAGCTATACAACTCTCGATGAGGTTGATGGGTTAATATGTGAATTATTTAAGAATGGTGAGGATTTTTTTGTATGTTTTTCACCATATATGTATCATACGAGAGCGTTCCCTTTCACAAAAAGATCTGAACTTATGTACCATAGTAACTAGTCGGACAAAGAGACGGAAAAGTATGCCTCGGATGCAATTGCTTTTATTCTTTAATGCCCAGTATTAATATATTGATCTGCAA 2985 0.4064 MPRKVNYGLHYDDDYYDDDYDDYAYDDADAEAEDYGGPETKQETNKLGLWQCSICTYDNDESMTFCDICGVVRHPSVNNGISNSSKTVEDISKSPGVSKLARSLFQSLPQQIPKEVVLFPKPGDDFLTDDSNFYKLENVQGEFHEIHKAFSTRSNPHLSIDPFKFDVPSPDDVVHTGLHSSKMGLKDKVTNTRISQRSSSNREKNELSVQSNAESSDNLSSLMQKARQDSSAEGKLSKNIAIDLQTTSKASSSLAENLSKDKGEKINKINSSKNVARIQSSKEKSGSLSAVSKDKESDKISLSSIKVGKAESISGSFNNMVLDVRSGNSDKTNAKGPRSHVSYKPENWMLPQQAADTLTQLNLAIVGHVDSGKSTLSGRLLHLLGRISQKEMHKYEKEAKLQGKGSFAYAWALDESSEERERGITMTVAVAYFDTKKYHVVVLDSPGHKDFVPNMISGATQADAAILVIDASLGSFEAGMDGSKGQTREHAQLIRSFGVDRVIVAVNKMDVVAYSKDRFDFIRQQLGVFLHSCGFKGSSLSWIPMSAMENQNLVAPPSDASFKNWYGGPYLLDAIDSLEPPTREFSRPLLMPICDVIKSTTLGQVSACGKLEAGALRSGSKVLVMPSVVVGTVRSLERDSNACTIARAGDNVAVTLQGVDGNHVMAGGVLCHPDFPVAVAKHLELKVLVLEGASPILVGAQLEFHIHHAKEPARVSRILSVLDPKTGKVTKKSPRCLTAKQSAVVEVVLHESVCVVEFSGCKALGRVSLRSLGRTIAVGVVTRIIEEQG 789
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g02174 789 CDD EF1_alpha 362 581 - -
Pste3g02174 789 Pfam Elongation factor Tu C-terminal domain 677 784 IPR004160 -
Pste3g02174 789 SUPERFAMILY Ran binding protein zinc finger-like 48 73 IPR036443 -
Pste3g02174 789 MobiDBLite consensus disorder prediction 269 287 - -
Pste3g02174 789 ProSitePatterns Zinc finger RanBP2-type signature. 50 69 IPR001876 -
Pste3g02174 789 MobiDBLite consensus disorder prediction 265 293 - -
Pste3g02174 789 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 360 603 IPR027417 -
Pste3g02174 789 ProSiteProfiles Zinc finger RanBP2 type profile. 46 75 IPR001876 -
Pste3g02174 789 FunFam Elongation factor 1 alpha-like protein 351 582 - -
Pste3g02174 789 CDD HBS1_C_III 676 784 - -
Pste3g02174 789 Gene3D - 350 582 IPR027417 -
Pste3g02174 789 FunFam Translation elongation factor EF-1 585 675 - -
Pste3g02174 789 PRINTS GTP-binding elongation factor signature 421 429 IPR000795 GO:0003924|GO:0005525
Pste3g02174 789 PRINTS GTP-binding elongation factor signature 441 451 IPR000795 GO:0003924|GO:0005525
Pste3g02174 789 PRINTS GTP-binding elongation factor signature 502 511 IPR000795 GO:0003924|GO:0005525
Pste3g02174 789 PRINTS GTP-binding elongation factor signature 457 468 IPR000795 GO:0003924|GO:0005525
Pste3g02174 789 PRINTS GTP-binding elongation factor signature 362 375 IPR000795 GO:0003924|GO:0005525
Pste3g02174 789 MobiDBLite consensus disorder prediction 192 235 - -
Pste3g02174 789 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 358 589 IPR000795 GO:0003924|GO:0005525
Pste3g02174 789 Gene3D Translation factors 586 675 - -
Pste3g02174 789 PANTHER TRANSLATION FACTOR 357 784 - -
Pste3g02174 789 FunFam elongation factor 1-alpha isoform X4 679 788 - -
Pste3g02174 789 Pfam Elongation factor Tu GTP binding domain 361 577 IPR000795 GO:0003924|GO:0005525
Pste3g02174 789 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 681 785 IPR009001 -
Pste3g02174 789 SUPERFAMILY Translation proteins 580 675 IPR009000 -
Pste3g02174 789 SMART zf_4 48 72 IPR001876 -
Pste3g02174 789 Gene3D Translation factors 679 788 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g02174 Pste-Chr3 15167213 15179725 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g02174 48 79 Eukaryotic Initiation Factors Gene Family AT5G10630 68.750 2.17e-10 62.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g02350 2 23598231 23601771 Pste3g02174 3 15167213 15179725 PCT