Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g02171 CATTCGAATCTAAAGTTTCTTCCACCCATTATCATGAACATGACATTACCTCCACTCTTCCATCTTTGGTTTCTTGCCTTTTGTTTGATCCCTTCTTTGGCCAGGGGAGCTACTCTGCCAGAAGATGAAGTGGAAGTTATGAAAGAGATAGGTAAGACACTTGGGAAGAAGAATTGGGATTTCAGCGTGGATCCATGCAGTGAAAAAAGTAATTGGACTTCAGCTGTTCAAGTAAAGGGATCTGAAAATGCTGTATCCTGCAATTGCCTTTTTGCCAATGCCACTATCTGCCACGTTGTTAGCATTGACCTCTCCCGCAACTATCTTAATGGTACCATTCCTCCACAATGGGGTTCAATGAATCTTGTCAACATTTCCATTCTTGGAAATCGGCTAACAGGTTCAATCCCAAAAGAATTAGGAAACATCACCACACTGAAAAGTTTGGTCCTAGAGTTCAATCAATTATCTGGAGTGCTTCCTCCCGAGCTTGGGAATCTCCCCCGGCTTGAAAGATTGCTTCTTACATCCAACTATTTTACTGGAAATTTACCTTCTACATTTACTAAGCTTACTACACTGAAGCATCTTCGACTTGGCGATAATCAATTCTCTGGAACCTTACCCAATTTCATTAAGAGCTGGACAAGTCTAGAGAAACTGGTGATGCAAGGGAGTGGTTTTAGTGGGCCAATTCCTTCTGAAATTTCATTTCTAAACAACCTCACAGACTTGAGAGTTAGTGACTTGAAAGGACCAGATTCACAATTTCCAAAACTTAAAAACTTGACAAACTTGCAATCATTAATATTGAGAAGTTGCAATCTTATAGGAATGGTTCCTGAATATATTGGAAACGTGACTAGTTTACGATCATTAGACCTCAGTTTTAACAAATTAACAGGACCAATTCCGAGAACTTTGGGTAGCCTAAATGATATAAATTTATTATATTTAACGGGAAACTCTTTCACTGGACCACTGCCTAATTGGATAGATAGGCCAGACTATACGGACCTCTCATATAACAATTTGAGCATTGAAAACCCAGAGCAATTGACATGTCAACAGGGTACCTGGTACGCTCTCCATATAAATTGTGGTGGGAAGTTAATTTCTAAAGGAAACATGCAATATGATGATGATTCTCAAGAAGCTGGACCAGCAAGATTTCATCGAACTGGATCAAATTGGGTATTTAGCAACACTGGTCATTTCTTTGATAGCAGTCGTTTAGACTACTATACCTGGTCTAATACTACTAAGCTTGATATGGACAATGCTGAACTATATATGGATGCCCGTGTTTCTGCTCTTTCTCTCACATATTATGCATTTTGCATGGGAAATGGAAGCTACACAATAAGTCTTTATTTTGCAGAAATAATGTTCACTCATGATCAAACATATAGCAGCCTTGGAAGGCGTGTATTTGACATTTACATTCAGAGAAAGTTGGTGTTGAAGGATTTCAATATTGAAAAAGAAGCTGGAGGAGTTGGTAAAGCAATCATAAAAAAGTTCAGTGCTATCGTGAATAGTAGTACCTTGGAGATTCGTCTACAATGGGCTGGGAAGGGGACAACTGCTATACCATTTGGATCAGTTCATGGTCCTCTTATATCAGCTATATCGGTTGATCCTGATTTTACACCCCTGGAGGAAAATGGTGGTATACCTGTGCACTCTATTGTTGCAATTGTAGCTGCTGGAGCACTTATTATCATCTTAATATTTGGTATAGCTTGGTGGAAAGGATGTTTTGGACAAAAAATTTCATCAGAAAGAGAGCTAAGAGGTATTGATTTGCAAACGGCCTTATTTAGCTTTCGACAAATTAGAGCTGCAACTAACAACTTTGATATTGCCTTTAAAATTGGAGAAGGAGGGTTTGGTCCTGTTTACAAGGGTATTCTTTCAGATGGCACAATAATAGCAGTTAAACAACTTTCTTCTAAATCAAAGCAAGGAAATCGTGAGTTTATAAATGAGATTGGCATGATTTCTGCTTTGCAACACCCTTGTCTAGTTAAGCTTTATGGTTGTTGCATGGAGGGAGATCAATTGCTATTGATATATGAATACATGGAAAACAATAGTCTAGCTCATGCTTTATTTGGAGAAGAAAAATGTCAATTGAAGTTAGATTGGTCAACAAGGCAAAGGATTTGTGTTGGTATTGCTAGAGGTTTGGCTTACCTCCATGGAGAGTCTAGGTTAAAGATAGTTCACAGGGACATTAAAGCGACTAATGTGCTACTAGATAAAGATCTCAATCCTAAGATATCTGATTTTGGTTTGGCCAAACTTGACGAAGAAGGTCATACCCACCTAACTACCAGAATAGTTGGAACCTATGGATACATGGCTCCTGAATATGCAATGCACGGCTATTTAACTGACAAAGCTGATGTGCATCTATTGAAAGAAAAAGGTAATATAATGGACATGGTTGACGAAAGGTTGGGTGAAGACTTCAAAAAAGATGAAGCAATAGTTATGATTAATGTGGCTCTTCTATGCACACACGTTTCCTTATTACACAGACCCACCATGGCCGCAGTGTTATGCATGCTTGAAGGCAAAACTGATGTTCAAGAGGTGGTACCAGATACAAGCCAAGTATTGGATGGAAAGAATTTTAAGGTAATCGAACAATATTACCATATGAGAGAGAAAAATGTAACTAAAGAACAAAGCTTCTCGATGGATGAAAGTTCTGCATTTATGTCTGAGACAGATCTATATTCTATCAACATGGATTCTTCTTACTTGGAGAAA 2781 0.384 HSNLKFLPPIIMNMTLPPLFHLWFLAFCLIPSLARGATLPEDEVEVMKEIGKTLGKKNWDFSVDPCSEKSNWTSAVQVKGSENAVSCNCLFANATICHVVSIDLSRNYLNGTIPPQWGSMNLVNISILGNRLTGSIPKELGNITTLKSLVLEFNQLSGVLPPELGNLPRLERLLLTSNYFTGNLPSTFTKLTTLKHLRLGDNQFSGTLPNFIKSWTSLEKLVMQGSGFSGPIPSEISFLNNLTDLRVSDLKGPDSQFPKLKNLTNLQSLILRSCNLIGMVPEYIGNVTSLRSLDLSFNKLTGPIPRTLGSLNDINLLYLTGNSFTGPLPNWIDRPDYTDLSYNNLSIENPEQLTCQQGTWYALHINCGGKLISKGNMQYDDDSQEAGPARFHRTGSNWVFSNTGHFFDSSRLDYYTWSNTTKLDMDNAELYMDARVSALSLTYYAFCMGNGSYTISLYFAEIMFTHDQTYSSLGRRVFDIYIQRKLVLKDFNIEKEAGGVGKAIIKKFSAIVNSSTLEIRLQWAGKGTTAIPFGSVHGPLISAISVDPDFTPLEENGGIPVHSIVAIVAAGALIIILIFGIAWWKGCFGQKISSERELRGIDLQTALFSFRQIRAATNNFDIAFKIGEGGFGPVYKGILSDGTIIAVKQLSSKSKQGNREFINEIGMISALQHPCLVKLYGCCMEGDQLLLIYEYMENNSLAHALFGEEKCQLKLDWSTRQRICVGIARGLAYLHGESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLDEEGHTHLTTRIVGTYGYMAPEYAMHGYLTDKADVHLLKEKGNIMDMVDERLGEDFKKDEAIVMINVALLCTHVSLLHRPTMAAVLCMLEGKTDVQEVVPDTSQVLDGKNFKVIEQYYHMREKNVTKEQSFSMDESSAFMSETDLYSINMDSSYLEK 927
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g02171 927 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 257 353 - -
Pste3g02171 927 Gene3D Transferase(Phosphotransferase) domain 1 696 874 - -
Pste3g02171 927 Gene3D - 365 548 - -
Pste3g02171 927 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 589 695 - -
Pste3g02171 927 Pfam Malectin domain 362 544 IPR021720 -
Pste3g02171 927 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 360 549 - -
Pste3g02171 927 Pfam Protein kinase domain 625 805 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g02171 927 Gene3D Ribonuclease Inhibitor 252 364 IPR032675 -
Pste3g02171 927 Gene3D Ribonuclease Inhibitor 62 251 IPR032675 -
Pste3g02171 927 SMART serkin_6 620 859 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g02171 927 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 185 251 - -
Pste3g02171 927 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 25 889 - -
Pste3g02171 927 SUPERFAMILY L domain-like 91 341 - -
Pste3g02171 927 ProSiteProfiles Protein kinase domain profile. 620 927 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g02171 927 Pfam Leucine rich repeat 264 323 IPR001611 GO:0005515
Pste3g02171 927 SUPERFAMILY Protein kinase-like (PK-like) 603 866 IPR011009 -
Pste3g02171 927 Gene3D Phosphorylase Kinase; domain 1 589 695 - -
Pste3g02171 927 FunFam Leucine-rich repeat receptor protein kinase EMS1 92 184 - -
Pste3g02171 927 ProSitePatterns Serine/Threonine protein kinases active-site signature. 742 754 IPR008271 GO:0004672|GO:0006468
Pste3g02171 927 FunFam Os07g0541700 protein 696 785 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g02171 Pste-Chr3 15157685 15178669 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g02171 30 907 Receptor kinase-like Gene Family AT1G53420 51.230 0.0 910
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pste3g02171 Pkinase 3.9e-41 CL0016