Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g02158 ATACTTCTCCTCTTATTCACATGCACTACTATACACGTTCTCTCCAATAAACTAAGGAGAAAACGAAACCACAAGCTTCCACCAGGACCTTCTCTTCTAACCCTTTTGAGAAACCTAGTTGAACTTGGCAAAAAACCACAACAAACATTGGCTAAACTTGCAAAGCTTCATGGCCCCATAATGAGTTTGAAGCTAGGTCAACTAACCACCATAGTTATGTCTTCACCAGAAATAGCCAAAGAGGTGTTCCAAACCCATGATTTGTTATTCTCAAACCGAACAATTCCACATGCCACCACAATTCACAACCACAATCATAATAGCGTGGCCTTTCTCCCCATTTCTCCTCTTTGGAGAGACCTTAGGAAAATATGCAATAACCAATTATTCTCCAAGAAGTCCCTTGATGCAAGCCAAAACCTTAGACGCAAAAAACTCCAAGAACTTCTCAATGATGTGCATAGAAGTAGCCTTAATGGAGAAGTGGTAGATATTGGAACTTTGGCTTTTAGGACTTCGATTAATTTTTTGTCAAACACTTTTTTCTCTTTGGATTTTGGCAACTCTGTGGGAGAAACTGAAGAGTACAAGGGCATAGTGAAGAATCTTGGAAGAGCAATTGCAACGCCAAACTTGGAGGATTTTTTCCCTTTGTTGAAGATGGTTGATCCACAAGGGATTAGAAGACGCGCTTCTACTTACGTTTCTAAGTTGTTTGCTATTTTTGACGGCTTGATCCACAAAAGATTGGAGTTTGGAGATGCCACAAATAATGATGACATGTTAGATACCTTGCTCAACATTTCCCAGGAGGATGGCCAAAAGATGGACCACAAAAAGATTAAGCATTTATTCCTTGATCTAATTGTTGCTGGAACTGATACAACTTCCTACACAATGGAATGGGCAATGACCGAGTTAATCAACAACCCAAATGCAATGTGGAAAGCCAAAAGGGAGCTTGAGGAAACCATTGGAATAGGTAATCCTATTGAGGAATCAGACATTGCAAGACTTCCATACTTGCATGCAATAACAAAAGAGACCTTACGCATGCACCCAGGTGCACCACTTTTGCTACCTCGAAAGGCCAAGATTGATGTGGAAATCAATGGCTACACTATTCCTCAAGGTGCACAAATTATTATTAATCAATGGGCCATTGGAAGGAACCCAAGCATATGGGAAAATCCTCATTTGTTTTCACCTGAGAGATTTTTGGAGTCAGAAATTGATGTCAATGGTCGACACTATCAACTCACACCATTTGGTGGTGGACGACGAATATGCCCTGGCATGCCACTTGCTATGAGGATGTTGCATTTGATGTTGGGGTCGTTGATTAATGGCTTTCATTGGAAATTTCAAAATGGTGTGAACCCAGATGTAGATATGGGTCAACCCTTGCGAGCTATTCCGTTTAGAATAAACAAACCTTACACTGATGGACCTGTGGCAGTAATTAATGAAGAAAAC 1476 0.4058 ILLLLFTCTTIHVLSNKLRRKRNHKLPPGPSLLTLLRNLVELGKKPQQTLAKLAKLHGPIMSLKLGQLTTIVMSSPEIAKEVFQTHDLLFSNRTIPHATTIHNHNHNSVAFLPISPLWRDLRKICNNQLFSKKSLDASQNLRRKKLQELLNDVHRSSLNGEVVDIGTLAFRTSINFLSNTFFSLDFGNSVGETEEYKGIVKNLGRAIATPNLEDFFPLLKMVDPQGIRRRASTYVSKLFAIFDGLIHKRLEFGDATNNDDMLDTLLNISQEDGQKMDHKKIKHLFLDLIVAGTDTTSYTMEWAMTELINNPNAMWKAKRELEETIGIGNPIEESDIARLPYLHAITKETLRMHPGAPLLLPRKAKIDVEINGYTIPQGAQIIINQWAIGRNPSIWENPHLFSPERFLESEIDVNGRHYQLTPFGGGRRICPGMPLAMRMLHLMLGSLINGFHWKFQNGVNPDVDMGQPLRAIPFRINKPYTDGPVAVINEEN 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g02158 492 Pfam Cytochrome P450 27 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste3g02158 492 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 3 466 - -
Pste3g02158 492 FunFam Cytochrome P450 76C4 18 478 - -
Pste3g02158 492 PRINTS E-class P450 group I signature 420 430 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste3g02158 492 PRINTS E-class P450 group I signature 343 361 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste3g02158 492 PRINTS E-class P450 group I signature 54 73 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste3g02158 492 PRINTS E-class P450 group I signature 280 297 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste3g02158 492 PRINTS E-class P450 group I signature 384 408 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste3g02158 492 PRINTS E-class P450 group I signature 300 326 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste3g02158 492 PRINTS E-class P450 group I signature 430 453 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste3g02158 492 Gene3D Cytochrome P450 12 472 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste3g02158 492 SUPERFAMILY Cytochrome P450 27 465 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste3g02158 492 CDD CYP76-like 54 473 - -
Pste3g02158 492 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 423 432 IPR017972 GO:0005506|GO:0016705
Pste3g02158 492 PRINTS P450 superfamily signature 344 355 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste3g02158 492 PRINTS P450 superfamily signature 421 430 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste3g02158 492 PRINTS P450 superfamily signature 430 441 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste3g02158 492 PRINTS P450 superfamily signature 291 308 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g02158 Pste-Chr3 15019950 15022291 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g02158 2 481 Cytochrome P450 AT2G45550 42.308 3.62e-143 419