Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g02137 ATGAAACCATTTAGCCTTTTGGTGTTGTTATTATCTTTCTTCTCCGTCATGGGCCTGCAGCTTCCTTCACAGGACATTTTAGCATTGCTGGAATTCAAGAAAGGCATCAAGCATGACCCAACAGGCTATGTCCTCAGTTCCTGGAATGAGGACTCCGTTGACTTTGACGGATGCCCTTCTTCATGGAACGGAGTACTTTGTAATGGTAGTGATGTTACTGGTGTTATCCTTGATAACCTTGGTCTCGCTGCTGATGCCAACTTGAGCGTTTTCTCAAACCTTAAAAAGCTTGTAAAACTCTCTATGTCCAACAATTCTATCTCAGGAAAACTTCCCGACAACATTGCTGAATTCAAAAGCCTTGAGTTGCTGGATGTATCCAATAATCTCTTCTCTTCATCCTTACCAGTGGGAATTCGTAAGTTAACTAGCTTGCAAAATATGTCATTGGCTGGAAATAACTTCTCTGGTCAAATTCCTGACTCTATTTCAGGAATGGCTTCAATTCAATCTTTGGACTTGAGCTGCAATTCATTTTCTGGACCACTGCCAGCATCATTGACTAAACTGACTAACCTAGTATTACTTAATTTATCTCATAATGGGTTCACTGGAAAAATTCCCCAAGGTTTTGAATTGATCCTTTCTCTTGACAAGATTGACTTGCATGGGAATTTGCTTGATGGCAATTTGGAAGATGAATTCATACTTATTTCAAATGCCAGCTACATTGATTTTAGTGAGAATATGCTAGTAAGTTCTTATTCTCAGCAGCAGAAGTCTCTGCCACAAATATCTGAAAGTATTAAGTATCTGAATCTAAGCCACAATCGGCTTACTGGATCATTGGTTAGTGGAAGAGAGCAAGCAGATTTTGCATACTTGAAGGTGTTAGACCTCAGTTACAATCAATTATCTGGAGAATTGCCTGAATTTGATTTTGTTTATGAACTCAAGGTTCTTAAGCTCAGCAACAACAGATTTTCAGGATTTGTTCCCTCTTGTCTTCTTAAAGGAGACTCTTTGGTTTTAACTGAACTGGATTTGAGTAGCAACAATCTCTCAGGGCCAGTAAGAATAATTACATCAACAACGCTGCACTTTCTTAATCTATCATCAAATGGGTTCACTGATGAGCTGCCATTGCTTACTGGAAGCTGTGCTGTACTTGATTTGTCAAATAACAAATTAGAAGGAAATTTAAGCAGGATGATGAAATGGGGGAATATTGAATTTCTCGATCTCAGCAGGAATCACTTGACAGGACCCATCCCTGAGATAACTCCTCAGTTTTTGAGATTGAATTATCTAAATCTTTCCCATAACTTTCTTAGCAGCTCCCTTCCAAGAGTCTTAACGCTATATCCAAAGCTTAAAGTGCTTGATATTAGTTCCAATCAGTTAGATGGTAAATTTCTAGTTGATCTTCTCAGAGTGCCCACTTTGCAAGAGGTCCATCTTGAAAATAATATGATCTCTGGTCGCATTAACTTATCATCCTTCCTTCCTAGTTCTTCTGATCTTCAGATTCTTGAATTTTCTTATAACCACTTTAATGGTTCTTTCCCTGAAGAGTTTGGGTCATTAACTGGCCTGAGAGTGCTCAATATTGCTGGAAATCATTTTTCTGGTTCTCTTCCAATTACAATTGCTAACATGAGTTCCCTATATTCCTTGGATATATCAGAAAATCATTTTACTGGCCCTTTACCAATTAACATACCAAAAGGACTAAAAAAATTCAATGCTTCAATCAATGATCTGTCAGGAGTTGTGCCAGAAAATCTTAGGAAGTTCCCCAGTTCTTCTTTCTATCCTGGTAATAGTAAGTTGCATTTTCCAAATGGTCCTTCTGGATCAATCAATAAACCTGATGAAAGTTCCAAAAGGAAGCCAATCAGCTCTATTGTCAAAGTGATAATAATAATCGTGTCATGTGTGGTTGTTGTTCTCTTCATGTCAGTACTGCTTGCTATCATCATACACTACATCCGAACATCAAGATTCCCATCAAAATATGCCACTTCTAAGGATATGAGTGAGCATTCTCAACCACACACCACTCACCCTGGTCGTGTGAAAGACTCAAAAAGTGTTTTGGTTATATCAGCTGAGGACTTCGTCACCTCACAGAAAGGATCATCATCAGAGATTATCAGCCTTGATGAACAAAGAGCAGCTGTAGTAGGGTGTTCCCCATCAAAAAATAGCCACTTTTCATCACCAGGGTCTAGTGATTCAATTTCTGTAGGAAATCATGCAAGACTATATGCAAGATCACCAGATAAATTGATAGGAGAGCTCTATTTTCATGATGATGCAATCACATTGACACATGAGGAGCTATCTAGGGCCCCAGCTGAAGTTCTGGGGAGAAGCAGTCATGGTACATCTTACAAGGCAAAACTGGAGAATGGTTTGTTATTGAGAGTGAAGTGGCTAAGAGGAGGAGTGGCAAAACAGAGAAAAGAGTTTGCCAAAGAGGCCAAAAAAGTTGCAAATATCCGGCATCCCAATGTTGTGGGATTGAGAGGGTACTACTGGGGTCCTACCCAGCACGAGAAGCTTATTCTTTCAGATTACATCTCTCCTGGAAGTCTTGCATATTTTTTATATGAACGACCAGGGCGAGGTCCAGCATTGACTTGGGCCCTGAGGCTAAAAATAGCAGTTGATGTAGCACGTGGGCTAAACTATCTCCACTTTGATCGTGCTGTTCCTCATGGAAACCTCAAAGCAACAAATGTGTTGTTAGATACAGGTCACTTGCATGCACGTGTAGCTGATTACTGCCTTCATAAACTTATGACACAGGCTGCTACATTTGATCAAATTATGGATGCTGGGGTCTTGGGATATCGGGCACCAGAGCTTGGTGCTTCCAAGAAGCCAATACCCTCCTTCAAATCAGATGTCTATGCTTTTGGGGTTATACTTTTGGAGCTTCTAACGGGAAGGTGTGCTGGTGATGTTGTATCTCATGAGAAGGAAGGTCTTGAGCTGGCAAATTGGGTAAGGTTGCTTGTTGCACAAGGTAGAGGATCAGAATGTTTTGATGCTGAATTGGTGCAAGAAATGGGCAATTCAGTTGTTAAAAAGGGAATGAATGAGGTCCTTGGAATAGCCATTGAATGCATAAGATCTGTTTCTGAGAGACCGGGTATCAAGACTGTATATGAAGATCTTTCGTCTATATAA 3198 0.4003 MKPFSLLVLLLSFFSVMGLQLPSQDILALLEFKKGIKHDPTGYVLSSWNEDSVDFDGCPSSWNGVLCNGSDVTGVILDNLGLAADANLSVFSNLKKLVKLSMSNNSISGKLPDNIAEFKSLELLDVSNNLFSSSLPVGIRKLTSLQNMSLAGNNFSGQIPDSISGMASIQSLDLSCNSFSGPLPASLTKLTNLVLLNLSHNGFTGKIPQGFELILSLDKIDLHGNLLDGNLEDEFILISNASYIDFSENMLVSSYSQQQKSLPQISESIKYLNLSHNRLTGSLVSGREQADFAYLKVLDLSYNQLSGELPEFDFVYELKVLKLSNNRFSGFVPSCLLKGDSLVLTELDLSSNNLSGPVRIITSTTLHFLNLSSNGFTDELPLLTGSCAVLDLSNNKLEGNLSRMMKWGNIEFLDLSRNHLTGPIPEITPQFLRLNYLNLSHNFLSSSLPRVLTLYPKLKVLDISSNQLDGKFLVDLLRVPTLQEVHLENNMISGRINLSSFLPSSSDLQILEFSYNHFNGSFPEEFGSLTGLRVLNIAGNHFSGSLPITIANMSSLYSLDISENHFTGPLPINIPKGLKKFNASINDLSGVVPENLRKFPSSSFYPGNSKLHFPNGPSGSINKPDESSKRKPISSIVKVIIIIVSCVVVVLFMSVLLAIIIHYIRTSRFPSKYATSKDMSEHSQPHTTHPGRVKDSKSVLVISAEDFVTSQKGSSSEIISLDEQRAAVVGCSPSKNSHFSSPGSSDSISVGNHARLYARSPDKLIGELYFHDDAITLTHEELSRAPAEVLGRSSHGTSYKAKLENGLLLRVKWLRGGVAKQRKEFAKEAKKVANIRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLAYFLYERPGRGPALTWALRLKIAVDVARGLNYLHFDRAVPHGNLKATNVLLDTGHLHARVADYCLHKLMTQAATFDQIMDAGVLGYRAPELGASKKPIPSFKSDVYAFGVILLELLTGRCAGDVVSHEKEGLELANWVRLLVAQGRGSECFDAELVQEMGNSVVKKGMNEVLGIAIECIRSVSERPGIKTVYEDLSSI 1065
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g02137 1065 PANTHER OS07G0626500 PROTEIN 10 1065 - -
Pste3g02137 1065 Pfam Leucine Rich repeat 363 379 IPR001611 GO:0005515
Pste3g02137 1065 Pfam Leucine Rich repeat 294 308 IPR001611 GO:0005515
Pste3g02137 1065 Pfam Leucine Rich repeat 344 356 IPR001611 GO:0005515
Pste3g02137 1065 FunFam LRR receptor-like serine/threonine-protein kinase GHR1 21 266 - -
Pste3g02137 1065 FunFam Leucine-rich repeat receptor-like protein kinase 769 861 - -
Pste3g02137 1065 Gene3D Phosphorylase Kinase; domain 1 762 861 - -
Pste3g02137 1065 ProSiteProfiles Protein kinase domain profile. 784 1065 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g02137 1065 Pfam Protein tyrosine and serine/threonine kinase 788 985 IPR001245 GO:0004672|GO:0006468
Pste3g02137 1065 SUPERFAMILY L domain-like 268 596 - -
Pste3g02137 1065 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 359 616 - -
Pste3g02137 1065 Gene3D Transferase(Phosphotransferase) domain 1 862 1065 - -
Pste3g02137 1065 Pfam Leucine rich repeat N-terminal domain 23 68 IPR013210 -
Pste3g02137 1065 Gene3D Ribonuclease Inhibitor 312 624 IPR032675 -
Pste3g02137 1065 FunFam Pollen receptor-like kinase 1 862 1065 - -
Pste3g02137 1065 MobiDBLite consensus disorder prediction 675 694 - -
Pste3g02137 1065 Pfam Leucine rich repeat 144 202 IPR001611 GO:0005515
Pste3g02137 1065 SUPERFAMILY L domain-like 50 381 - -
Pste3g02137 1065 Gene3D Ribonuclease Inhibitor 22 311 IPR032675 -
Pste3g02137 1065 SUPERFAMILY Protein kinase-like (PK-like) 787 1023 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g02137 Pste-Chr3 14860143 14864032 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g02137 135 605 Receptor kinase-like Gene Family AT5G07280 31.369 1.95e-45 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pste3g02137 PK_Tyr_Ser-Thr 4.8e-26 CL0016