Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g02115 TATCTCCCACTCTTCCCTTTCTGTCACCAAAACACATGTCCCCGTTCACATTTGATCATAACACTTAACCACTAGATAGTACATACTACATACCATGTTATTTTCTCCTTTCTACAACTTGTTTGCTTTTGTTGTTTGTGTCTCTTCTTCCTCTATCCTAAATCTAAGCTATGCTTTTCAGGAGTGAGATAATAACACACAAAAAATAAATAATAAGTTGTGGTTTTTGTGATGGGGTGTTGATAAAGGACCTCGTGTTGCAAGGCTGTGTTTGGATTTGGTATCATGGGTAATTGTTGGTGTAGGTGGGAGTCATCAGATTATAGAGTCTCATCCAATGTAAAATCAGAACAAAACCCGGGAACCACACAAAGGAAAGATGATAGTAAATTGCCATCGAATCCTGAAGAAGTAGAAGATCTACGTCGTGACTCAGCCGCAAATCCTTTGATTGCATTCACTTACGATGAGTTAAAGGTAATCACAGCAAATTTTAGGCCAGATCGTGTATTGGGAGGAGGAGGATTTGGAAGTGTGTATAAAGGGTTCATTTCTGAGGAGTTAAGGCAGGGTCTCCCTACCCTTGCTGTAGCTGTTAAGGTTCATGATGGTGACAACAGTCATCAAGGGCACAGAGAATGGCTGGCAGAAGTCATATTTTTGGGGCAGCTTTCACATCCGAATCTAGTCAAATTAATTGGATACTGCTGCGAAGACGAACATAGGGTACTAATATATGAGTATATGTCCCGGGGGAGTGTGGAACACAACTTGTTCTCAAAAATTTTGCTTCCCATGCCATGGTCCATAAGAATGAAGATTGCATTTGGCGCTGCAAAGGGACTTGCGTTTCTTCATGAAGCAGAGAAACCAGTCATCTATCGTGATTTTAAGACATCAAATATTTTATTGGACCAGGACTACAATGCAAAACTTTCTGACTTTGGCCTCGCTAAGGATGGACCTGTTGGAGACAAATCCCATGTTTCTACTCGAGTGATGGGAACATATGGTTATGCCGCACCTGAATACATAATGACAGGTCATCTGACTTCAAGAAGTGATGTTTACAGTTTTGGTGTTGTCCTTCTTGAACTTCTCACTGGAAGAAAATCTTTAGACAAGTTAAGACCTGCTAGAGAGCAGAACCTTGCAGAATGGGCTCTTCCTTTGCTGAAGGAAAAAAAGAAATTTCTAAACATTATAGATCCGAGGCTGGATGGTGATTATCCAATTAAAGCAGTTCACAAGGCTGCAATGCTTGCATATCATTGCTTGAATCGTAACCCAAAAGCAAGGCCTCTAATGCGAGATATTGTGGATTCATTGGAGCCTTTGCAAGCACACACTGAGGTCCCTATTGGAAAAACGTTGACCATAATCAGTGAGATTCCTGAATCTGGTTTGAAAATGAAAGATGCAAAATAACTTGAAAGAGGATGTTGTTGTAGGTTATCTATCAGTTTCACTTCACTTGTTCATTGGGGGCAATTTCTTTCTATTCTATCCCTTTCTTTGCTTTTCAACATGGTGCTCATATATATGCAACTGGACTACTGTATCAACTGATTTAAAGTTAAACAAAAACAAACAATAGCAGCAAAAACACCTTACTATTAGGCATTCTTTAGTTTTATTTAACTTTAAGATTTAATAATATTTTAATCCTTA 1671 0.3908 MGNCWCRWESSDYRVSSNVKSEQNPGTTQRKDDSKLPSNPEEVEDLRRDSAANPLIAFTYDELKVITANFRPDRVLGGGGFGSVYKGFISEELRQGLPTLAVAVKVHDGDNSHQGHREWLAEVIFLGQLSHPNLVKLIGYCCEDEHRVLIYEYMSRGSVEHNLFSKILLPMPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDQDYNAKLSDFGLAKDGPVGDKSHVSTRVMGTYGYAAPEYIMTGHLTSRSDVYSFGVVLLELLTGRKSLDKLRPAREQNLAEWALPLLKEKKKFLNIIDPRLDGDYPIKAVHKAAMLAYHCLNRNPKARPLMRDIVDSLEPLQAHTEVPIGKTLTIISEIPESGLKMKDAK 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g02115 380 MobiDBLite consensus disorder prediction 16 46 - -
Pste3g02115 380 MobiDBLite consensus disorder prediction 26 46 - -
Pste3g02115 380 CDD STKc_IRAK 76 351 - -
Pste3g02115 380 Pfam Protein tyrosine and serine/threonine kinase 73 348 IPR001245 GO:0004672|GO:0006468
Pste3g02115 380 Gene3D Transferase(Phosphotransferase) domain 1 154 362 - -
Pste3g02115 380 PANTHER OS01G0588500 PROTEIN-RELATED 33 352 - -
Pste3g02115 380 ProSitePatterns Serine/Threonine protein kinases active-site signature. 197 209 IPR008271 GO:0004672|GO:0006468
Pste3g02115 380 ProSitePatterns Protein kinases ATP-binding region signature. 76 105 IPR017441 GO:0005524
Pste3g02115 380 ProSiteProfiles Protein kinase domain profile. 70 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g02115 380 FunFam Serine/threonine-protein kinase BIK1 37 153 - -
Pste3g02115 380 SUPERFAMILY Protein kinase-like (PK-like) 46 348 IPR011009 -
Pste3g02115 380 FunFam Probable serine/threonine-protein kinase PBL8 154 366 - -
Pste3g02115 380 Gene3D Phosphorylase Kinase; domain 1 32 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g02115 Pste-Chr3 14691524 14697661 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g02115 3 348 Glycoside Hydrolase AT3G07070 47.472 2.82e-106 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Pste3g02115 PK_Tyr_Ser-Thr 1.2e-46 CL0016