Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g02089 GTTTGTGATTAGTGAAGAGAGGAACAGAGGATCCAAGTTGGAGAGTCTATTTTGCCCGTACGGTTGGAGAGAGAATGCGTCTCTGAAAACAAAACATCAAAGCAAACCCTAAAACGCGAAAAAAGGTTGGAAGAATTCGCGAAGGAAAGAGCGAAGATGGAGATTCACTACAGTAATAGCTACTTCGAGAGGCGCCCCATTCTCAAGTCCAAGGCTCCCGCAGTTAAATGGGTTAAAGAATGGGTTCCCCAAGATCTTGTAACAACGGGAGGGAAGTGTATGATCTTAAAATGGGTAACAGGTGAGAGATATCCTATACTGCGCCGTAAGAAGCTGCATCTTAAGGATACCTTAAAGAGCTTAAAAGAAAAGACAAAAGAGCCATCAATGCCTGAGCCAGAACCAGAGCCAACTACTGAAGTACTTTTTCTTTGCAGCTATGATGGCTGTGGAAAAACTTTCATAGATGCTGGTGCGTTAAGGAAGCATTCCCACATCCATGGAGAGAGGCAATATGTTTGTCACTATGAGGGATGTGGAAAGAAATTTCTGGATAGCTCAAAGTTGAAAAGGCATTTTCTCATTCATACAGGGGAGAGGGATTTTGTGTGTCCTCATGAAGGCTGTGGTAAGGCCTTCTCCCTGGATTTCAACTTAAGGTCTCACATGAAAACACATTCCCAAGAGAACTATCATATCTGTCCATACCCAGATTGTGGAAAGAGATATGCTCACGAATACAAGCTAAAGAATCACATTGCATCTCATCATGAAAAGAATGCATCCGTAGATGTGACAAAGTACACTACTCCACCTTCAGAGAAGCAAACAAAAACTGCTAAACCTTCTGGTGGAGCATATGGATCTGCATCATCTGATCGCCCTTATGCATGTCCCTATGATGGGTGCGAAAAGGCATACATCCATGAATACAAGCTTAGACTCCATTTGAAGAGGGAGCACCCAGAGCTTATGCCTGACGAAAATGCAGAGCATGCTCAGGCTAATGTTGACAATGAAATGGATGAAGCAAGTGACCAAGATGCCTATGTTGGGAAACGGTCAAATGGTAAAATTCAGAAGCAGAGTAAGCCTAAACCAAACCTCAAGTTGCCTCCTTCCAAAATCGCAAAACGCAAAGTGTCCACTCCGACTTTAACTGTAAATAAAAATTCTTGGCCCGTGAAAGATGAACCTTATGATGAAGAAGATAGTGAAGAAACAGAAGAGGATCGTGACAATGTTGAAGATGGTTGGAGATACGCTGGTGGAAACAATGAAGATGACGACGAGGAAACAGAATACGAAGACTGAAAATCAGTTATGGCATCCTATATGATTTTTTTAAAGAAATATATTTCTCTTAAAAATATTTTCGGTTGCCTCTTTTATTTGGCTAAGTACATAGCTTCTTCTTGTGAAACTCATCTGTTGGCTGTGGAAGAACATGTATAAAATAAAATGCACTTGGTTCAATTGTCATCCGCTGGCACCGTAAAAGCGTGGAAGTAGTTCAAAGCTATCTTGCTTGAGGTTCTGACTTCTGAGAGTTTTGTAGACTTTGGTATGATGGTATAATTCTGTCAGCTTGCTATTGTTATATTTCTTCAAAATATT 1617 0.4106 MEIHYSNSYFERRPILKSKAPAVKWVKEWVPQDLVTTGGKCMILKWVTGERYPILRRKKLHLKDTLKSLKEKTKEPSMPEPEPEPTTEVLFLCSYDGCGKTFIDAGALRKHSHIHGERQYVCHYEGCGKKFLDSSKLKRHFLIHTGERDFVCPHEGCGKAFSLDFNLRSHMKTHSQENYHICPYPDCGKRYAHEYKLKNHIASHHEKNASVDVTKYTTPPSEKQTKTAKPSGGAYGSASSDRPYACPYDGCEKAYIHEYKLRLHLKREHPELMPDENAEHAQANVDNEMDEASDQDAYVGKRSNGKIQKQSKPKPNLKLPPSKIAKRKVSTPTLTVNKNSWPVKDEPYDEEDSEETEEDRDNVEDGWRYAGGNNEDDDEETEYED 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g02089 385 MobiDBLite consensus disorder prediction 347 361 - -
Pste3g02089 385 ProSiteProfiles Zinc finger C2H2 type domain profile. 150 179 IPR013087 -
Pste3g02089 385 FunFam Putative zinc finger protein 143 117 147 - -
Pste3g02089 385 ProSitePatterns Zinc finger C2H2 type domain signature. 246 269 IPR013087 -
Pste3g02089 385 FunFam Zinc finger protein 410 148 175 - -
Pste3g02089 385 SUPERFAMILY beta-beta-alpha zinc fingers 131 183 IPR036236 -
Pste3g02089 385 Gene3D Classic Zinc Finger 217 287 - -
Pste3g02089 385 FunFam Zinc finger transcription factor YY1 219 286 - -
Pste3g02089 385 ProSitePatterns Zinc finger C2H2 type domain signature. 122 144 IPR013087 -
Pste3g02089 385 SMART c2h2final6 244 269 IPR013087 -
Pste3g02089 385 SMART c2h2final6 91 115 IPR013087 -
Pste3g02089 385 SMART c2h2final6 180 204 IPR013087 -
Pste3g02089 385 SMART c2h2final6 120 144 IPR013087 -
Pste3g02089 385 SMART c2h2final6 150 174 IPR013087 -
Pste3g02089 385 ProSiteProfiles Zinc finger C2H2 type domain profile. 244 274 IPR013087 -
Pste3g02089 385 SUPERFAMILY beta-beta-alpha zinc fingers 239 267 IPR036236 -
Pste3g02089 385 MobiDBLite consensus disorder prediction 289 385 - -
Pste3g02089 385 ProSitePatterns Zinc finger C2H2 type domain signature. 152 174 IPR013087 -
Pste3g02089 385 Pfam Zinc finger, C2H2 type 150 174 IPR013087 -
Pste3g02089 385 Pfam Zinc finger, C2H2 type 180 204 IPR013087 -
Pste3g02089 385 ProSiteProfiles Zinc finger C2H2 type domain profile. 91 120 IPR013087 -
Pste3g02089 385 MobiDBLite consensus disorder prediction 212 234 - -
Pste3g02089 385 ProSitePatterns Zinc finger C2H2 type domain signature. 182 205 IPR013087 -
Pste3g02089 385 ProSitePatterns Zinc finger C2H2 type domain signature. 93 115 IPR013087 -
Pste3g02089 385 FunFam zinc finger transcription factor YY1 177 208 - -
Pste3g02089 385 Gene3D Classic Zinc Finger 117 147 - -
Pste3g02089 385 Gene3D Classic Zinc Finger 177 209 - -
Pste3g02089 385 SUPERFAMILY beta-beta-alpha zinc fingers 94 144 IPR036236 -
Pste3g02089 385 PANTHER TRANSCRIPTIONAL REPRESSOR PROTEIN YY 18 359 - -
Pste3g02089 385 MobiDBLite consensus disorder prediction 206 241 - -
Pste3g02089 385 ProSiteProfiles Zinc finger C2H2 type domain profile. 180 209 IPR013087 -
Pste3g02089 385 FunFam zinc finger transcription factor YY1 91 116 - -
Pste3g02089 385 ProSiteProfiles Zinc finger C2H2 type domain profile. 120 149 IPR013087 -
Pste3g02089 385 Gene3D Classic Zinc Finger 148 175 - -
Pste3g02089 385 Gene3D Classic Zinc Finger 91 116 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g02089 10 370 C2H2 Transcription Factor Family AT4G06634 62.368 3.20e-139 400
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Pste3g02089 zf-C2H2 0.0092 CL0361
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g02089 3 14429562 14438350 Pste3g02089 3 14429562 14438350 ECH