Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g02083 GTTGAAATGGATTGTCGTGGTGGTATTTCCCATAGTCCTCCGAAAAAGGAGAAGCATGAAAGCCTCCATAAGGAACCGATTTTCTTACATGGGGACTTGGATCTGTTGATAATAGAAGCCAAGTCTCTTCCAAATTTAGATTTATCTAGTGAAACAGTTAGAAAATGTATCACTATGGGAAACATGTGTCATCCTCCCTTTATAAAAGGACTAAAGACACACTCTGGAAAAGATAAGATGATAACTAGTGACCCTTATGTTTCTGTTTGCGTAGCTGGGGCTACCATAGCTCAGACTAGAGTGATTCCTAACTGTGAGAACCCTTTGTGGGATGAGAGATTTGTTGTGCCTGTTGCTCACCCTGCTCAAAAAGTGGAGTTCCTTGTGAAGGATAATGATATTCTTGGGGCTGAACTCATTGGAGTGGTGGAGATACCTGTTCACAAGATCATTTCAGGAAATAATATTAATGATTGGTTTCCCATCATTGGTCAGTATGGAAACTGCTTAAAACCATATCCTGAGTTGCATATTTCTGTTCAGTATAGGCCAATTGGAGTGGGTTCAGGAAGTATCAGTAGAGGGGATGGGACATTTTTAGGAGTTCCTAAAACGTATTTTCCTCTCAGGAAAGGAGGGAACGTCACTTTATATCAGGATGCACATTTAACCGATGGTATGCTACCTGAAATTCCACTTGATGGTGGAAAAATGTTTCAGCACAGTAAATGTTGGGAGGACATATGCCACGCAATTTTGGAAGCTCATCACCTGATATACATTATAGGATGGTCAGTTTACCACCCAATAAGGCTTGTCAGAGAGCCAACAAAACCATTGCCTTCTGGGGGAGAGCTTTCACTTGGAGAGCTGTTGAAGTACAAGTCACAAGAAGGGCTCCGAGTGGTTATGCTGATTTGGGATGACAGAACTTCACATGACAAGTTTCTTTTGAAAACAGATGGTGTGATGCAGACTCACGATGAAGAAACTAAAAAGTTTTTTAAACATTCCACGGTTGTGGGAACCCTCTTTACTCATCACCAGAAGTGTGTGCTTGTAGACAGTCAAGGTTCTGGGAATAATAGGAAAATAACAGCTTTCATTGGTGGTTTGGATCTGTGTGATGGTAGATATGATACACCTGAGCATCGGCTTTTTCGTGATCTAGATACAGTCTTTCATAAAGATTTTCATAATCCTACATTTCAATTAAATTCACATTCGTGTGCACCAAGGCAGCCATGGCATGACTTACATTGCAAAATTGAAGGTCCAGCAGCATATGACATATTGACGAATTTTGAACAAAGATGGAGGAAGGCCAAAAAATGGCGTGACTTCAGGCTCAAGAAGGTGACAAATTGGCATGATGATGCTTTGCTAAGGCTAGACCGTATTTCATGGATTGTCAAACCTTCTCCTTTTAATGGCGATAAATCTGTTCATGTAACTGATGAAAATGATCCTGAGAGTTGGCATGTGCAGGTATTTAGGTCCATAGATTCTGGATCCGTGAAGGGCTTTCCAAAGGATGTTAACAAAGCTAAGTCTCAGAATCTTTTATGTGGAAAAAATCTGAAAGTAGATCAAAGCATCCATACTGCTTATGTAAGAGCAATAAGATCGGCTGAACACTTTATATATATTGAGAATCAGTATTTTTTGGGCTCCTCCTATCATTGGCCTTCGTATAAAAATAATGCAGGTGCAAATCACTTGGTTCCCATGGAGTTGGCTTTGAAAATTGCTAGTAAGATCAATGCAAAACAACGTTTTTCTGTATATATAGTTATACCAATGTGGCCAGAAGGTGTTCCAACAAGTGCAGCTGTTCAAGAAATTTTGTTCTGGCAGGGACAGACAATGTCTATGATGTACAAGATAATAGGTGATGCCCTTGAAAAAGCAGGTGTGTCGGATAAGTATCATCCACAAGATTATCTCAGTTTTTACTGCCTTGGAAATAGAGAACCTCATGCAACAAATATTTCATCAACACCAAGTCCATCTGAAAACCGCGGTTTGGTATCAGTTAAAAAATTCAGACGTTTTATGATTTATGTCCATGCCAAAGGAATGATAGTTGATGACGAGTATGTCATTATTGGATCAGCAAATATTAACCAGAGATCATTAGATGGTTCAAGGGACACAGAAATAGCGATGGGTGCTTATCAACCAAAATTTACGTGGCCAGAAAAGAATGCCCATCCACATGGCCAGGTATATGGATACAGAATGTCACTGTGGGCTGAGCACCTTGGTTATCTTGATCATGTTTTTGCTGAACCTCACAGCCTGGAATGTATTAGATATGTCAACAAAATTGCCAAACAAAACTGGAGCACTTATGTGTCTGATGAAGGGAATCAGATGAGGGGACACTTGATGCAGTATCCAGTTAAGATCAGCAGGGATGGAAAAGTCAGTTCATTGGATGATTTTGAGTACTTTCCTGATGTTGGTGGCAAAATTCTTGGATCACCAAATTCACTTCCTGATGCACTAACCACCTGA 2520 0.4012 VEMDCRGGISHSPPKKEKHESLHKEPIFLHGDLDLLIIEAKSLPNLDLSSETVRKCITMGNMCHPPFIKGLKTHSGKDKMITSDPYVSVCVAGATIAQTRVIPNCENPLWDERFVVPVAHPAQKVEFLVKDNDILGAELIGVVEIPVHKIISGNNINDWFPIIGQYGNCLKPYPELHISVQYRPIGVGSGSISRGDGTFLGVPKTYFPLRKGGNVTLYQDAHLTDGMLPEIPLDGGKMFQHSKCWEDICHAILEAHHLIYIIGWSVYHPIRLVREPTKPLPSGGELSLGELLKYKSQEGLRVVMLIWDDRTSHDKFLLKTDGVMQTHDEETKKFFKHSTVVGTLFTHHQKCVLVDSQGSGNNRKITAFIGGLDLCDGRYDTPEHRLFRDLDTVFHKDFHNPTFQLNSHSCAPRQPWHDLHCKIEGPAAYDILTNFEQRWRKAKKWRDFRLKKVTNWHDDALLRLDRISWIVKPSPFNGDKSVHVTDENDPESWHVQVFRSIDSGSVKGFPKDVNKAKSQNLLCGKNLKVDQSIHTAYVRAIRSAEHFIYIENQYFLGSSYHWPSYKNNAGANHLVPMELALKIASKINAKQRFSVYIVIPMWPEGVPTSAAVQEILFWQGQTMSMMYKIIGDALEKAGVSDKYHPQDYLSFYCLGNREPHATNISSTPSPSENRGLVSVKKFRRFMIYVHAKGMIVDDEYVIIGSANINQRSLDGSRDTEIAMGAYQPKFTWPEKNAHPHGQVYGYRMSLWAEHLGYLDHVFAEPHSLECIRYVNKIAKQNWSTYVSDEGNQMRGHLMQYPVKISRDGKVSSLDDFEYFPDVGGKILGSPNSLPDALTT 839
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g02083 839 SMART C2_3c 32 159 IPR000008 -
Pste3g02083 839 Pfam Phospholipase D C terminal 759 829 IPR024632 -
Pste3g02083 839 Pfam C2 domain 31 162 IPR000008 -
Pste3g02083 839 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 29 184 IPR035892 -
Pste3g02083 839 MobiDBLite consensus disorder prediction 1 22 - -
Pste3g02083 839 PIRSF PLD_plant 17 839 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Pste3g02083 839 ProSiteProfiles C2 domain profile. 14 160 IPR000008 -
Pste3g02083 839 CDD C2_plant_PLD 26 183 - -
Pste3g02083 839 Gene3D C2 domain 27 182 IPR035892 -
Pste3g02083 839 SUPERFAMILY Phospholipase D/nuclease 531 770 - -
Pste3g02083 839 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 685 712 IPR001736 GO:0003824
Pste3g02083 839 Pfam Phospholipase D Active site motif 344 378 IPR001736 GO:0003824
Pste3g02083 839 Pfam Phospholipase D Active site motif 686 712 IPR001736 GO:0003824
Pste3g02083 839 SUPERFAMILY Phospholipase D/nuclease 202 448 - -
Pste3g02083 839 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 343 378 IPR001736 GO:0003824
Pste3g02083 839 PANTHER PHOSPHOLIPASE D 27 828 IPR015679 -
Pste3g02083 839 SMART pld_4 343 378 IPR001736 GO:0003824
Pste3g02083 839 SMART pld_4 685 712 IPR001736 GO:0003824
Pste3g02083 839 Gene3D Endonuclease Chain A 236 461 - -
Pste3g02083 839 Gene3D Endonuclease Chain A 495 732 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g02083 Pste-Chr3 14359820 14376210 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g02083 27 838 Phospholipase D Gene Family (Wang group) AT2G42010 53.625 0.0 904