Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g02078 TAGCAAAGAGGCTTCTCAAAGAAGGTTAGGAAGAAGAGAGAGAGGGATGCGGTTTCTGGGATACTTAGCGCAGTGGAGAAGCGCAGCGAAGGAAGCGTTAGATCGCACAGCCATCGCAGCCAAATTCCTGTGCTGGCTTCACTTCACCAGCAACTACCTCTGTTCCCCATGCCACGCGTATGGAGTTAGCATGCTCCCCACCCTCAACGTCGCCGGCGACGTCCTTCTCACCGACCACCTATCGCCGCGGCTCGGGAACGTTAGCCATGGAGACTTGGTTCTGGTTCGCTCACCTCTGAACCCTAAAATCATGTTGACGAAGCGCGTTGTTGCCGTGGAAGGGGATACTGTTACTTACTTCGACCCTTTGCACTCTGAGGATGCTAAAGTTGCAGTGGTGCCGAAGGGACATGTTTGGATTCAAGGGGATAACATATATGCTTCCCGTGATTCACGGCATTTTGGTCCAGTTCCATATGCTCTTATAGAAGGAAAAATATTTTTCCGGGTATGGCCACCAGATAGCTTTGGACTATTGGGTCAATGAAGAAGTTTTGAAGAAGGGCTTGTGGTTTCCTGTGAAATGCACATAATTATACTTGCAAGGAGCTTCAATGATTTACTTTAAGGTGGCTGTTTACAGGAGAAACATCTGAGGAGCATGCTCCCTTTTAGATAAGGCAAGCACATGTTTTTGGCGCCTATTTGAGTACTATGTAGTATGTATTGCTTGTGAAAGAATACAATGCAGGGTAGGCTTTCTTTGTTTTTGCTTTACTCAATGTCAATTTATACCTGAACAAGTGAACATTATAGACTTGAGATTCAAAGTATTCCTCAATCTGTTTGCCTTTCAG 857 0.4609 MRFLGYLAQWRSAAKEALDRTAIAAKFLCWLHFTSNYLCSPCHAYGVSMLPTLNVAGDVLLTDHLSPRLGNVSHGDLVLVRSPLNPKIMLTKRVVAVEGDTVTYFDPLHSEDAKVAVVPKGHVWIQGDNIYASRDSRHFGPVPYALIEGKIFFRVWPPDSFGLLGQ 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g02078 166 PANTHER PROTEASE FAMILY S26 MITOCHONDRIAL INNER MEMBRANE PROTEASE-RELATED 9 165 - -
Pste3g02078 166 SUPERFAMILY LexA/Signal peptidase 37 164 IPR036286 -
Pste3g02078 166 PRINTS Bacterial leader peptidase 1 (S26A) family signature 118 137 IPR000223 GO:0006508|GO:0008236|GO:0016020
Pste3g02078 166 PRINTS Bacterial leader peptidase 1 (S26A) family signature 37 53 IPR000223 GO:0006508|GO:0008236|GO:0016020
Pste3g02078 166 PRINTS Bacterial leader peptidase 1 (S26A) family signature 90 102 IPR000223 GO:0006508|GO:0008236|GO:0016020
Pste3g02078 166 Gene3D Umud Fragment, subunit A 35 162 - -
Pste3g02078 166 CDD S26_SPase_I 46 151 IPR019533 GO:0004252|GO:0006465
Pste3g02078 166 FunFam Inner membrane protease subunit 1 35 163 - -
Pste3g02078 166 Pfam Signal peptidase, peptidase S26 28 104 IPR019533 GO:0004252|GO:0006465
Pste3g02078 166 Pfam Signal peptidase, peptidase S26 113 156 IPR019533 GO:0004252|GO:0006465
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g02078 Pste-Chr3 14347571 14350981 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g02078 49 165 MADS-box Gene Family AT1G29960 49.153 2.58e-37 123