Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g02027 ATGATCTTGTTTTCTCATTTACTTGTTCATTTTGCCTCAGTACTCATCCTCCTCTCTCTTGAGCTACACAACTTTTCAATTGGAGAATCAGCAGTCACTTTAAGCATCACAACAGACAGAGAAGCCTTGATCTCATTCAAGTCTCAACTCAGTAATGACACTCTTAACCACTTATCATCCTGGAACCAGAATTTATCCCCTTGCAATTGGACTGGTGTCCTATGTGACAGGCTAGGCCAAAGAGTGACAGGCCTGGATCTTTCAGGCTTGGGACTCTCAGGTCACTTGAGTCCTTATATTGGTAACCTCTCCTCTCTTCACTCTCTCCAATTGCAGAATAACCAATTCACAGGTATGATTCCTGACCAAATTGGCAACCTATTCAGTCTCAGAATTCTAAATATGAGCTCTAACATGTTAGAAGGAAAGCTTCCTTCAAACATCACCCACTTGAATGAGCTCCAGGTTCTTGATTTATCCTCAAACAGGTTTGTCAGCAAGATTCCTGAAGACATCAGTAACTTGGAAAAGCTTGAGGTTTTGAAACTAGGAAGGAATAACTTCTATGGTGCAATCCCAGCATCTCTAGGAAACATTTCTTCTCTCAGAAATATCAGTTTTGGCACCAACTCTCTCACTGGTTGGATTCCTAGTGACTTGGGAAGGCTCCATGATTTGATTGAGCTTGATCTCACTTTCAACAATCTCAATGGGACCGTTCCACCTGTTATATACAACTTGTCTTCCCTTGTTAACTTGGCCTTAGCTTCAAACTCTTTATGGGGTGAGATTCCTAAGGATCTTAGTCACAAATTTACAAAACTCGTGGTATTCAATATCTGCTTCAATAATTTCACAGGTGGAATTCCAGGGTCTTTGCACAACCTCACCAACATTCAGGTCATTCGCTTGGCTTCCAACCATTTGGAAGGAACAGTGCCACCTGGTTTGGGAAATCTCCCATTTCTTCGCATGTATAATATCAGGCATAACAGGATAGTGAGTTCAGGAGTTAGAGGCCTAGATTTCATTACTTCTTTGACAAATAGCACTCTACTGAACTTTTTGGCAATTGATAATAATATGCTAGAAGGAGTGATTCCTCAAACCATTGGAAATCTCTCAAAGAATCTCTCAATATTATACATGGGACAGAACCATTTCAAAGGAAGCATACCGTCCTCTATTGGTCATCTTAGTGGCTTGAAGTTGTTAAACTTAAGCTACAATTCCATCTCTGGAGAAATCCCACATGAGTTAGGCCAGTTACAGGAACTACAAGAGCTATCTCTGGCTGGAAATGAGATATCAGGAGATATTCCAAACTCCCTAGGTAATCTCTTGAAGTTAAATCATATTGATTTGTCAAGAAACAGACTTATGGGGGGAATACCGACCAGTTTTGGGAATCTGCAAAACCTTCTATGCATGGACTTATCGAGCAACCAACTTAACGGAAGCATACCTATGGAAATCCTCAATCTCCCAACTTTAAGCAACTTTTTGAACTTGTCTATGAACTTTTTGAGTGGACCAATACCTCAAATTGGGAGATTGAGTAGTGTGGCCATCATTGACTTTTCAAGTAACCAATTGTATGGCGGCATCCCCAGCTCATTAAGCAATTGTCTCAGCTTGGAAAAATTGTTGTTAGCCCGGAATCAACTTTCAGGTCCCATTCCAAAGGCTCTTGGAGATGTGAAAGGCTTGGAAACCTTGGACCTGTCCTCCAACCAACTCTCTGGAAACATTCCCACTGAGATTCAAAATCTACATGGCCTTAAGCTTTTAAACCTCTCGTACAATGATTTAGAAGGAGGCATTCCTAATGATGGAGTTTTCCAAAACCTCTCTGCTGTCCATTTGGAGGGCAATAGAAATCTTTGCTTGCATTTCTATTGCCTGCCTCATGGCAATGGAAGCATAAATATAAGACTTTACATCATCATAATAGGCATCATGGTAACATTAATACTATATCTCACAATTCGCATACTACTGCATATAAAGAACAAAAAAGCGAAGGTAGCAGCAGCAACATCTGAACAGCTAAAGCCTCATGCATCAATGATCTCTTATGACGAGCTTCGTATGGCAACTGAGGAGTTTAGCCAGGAAAAGTTGTTAGGAGTTGGAAGCTTTGGCTCAGTTTATAAAGGCCATCTAAGTGGTGGAACTACTGTTGCAGTGAAAGTTCTTGATACCCTTAGAACTGGCTCTTTAAAGAGTTTTTTTGCGGAATGTGAGGCTCTGAAGAACTCGAGGCATCGAAATCTGGTTAAGCTGATCACTTCGTGCTCTAGCGTTGACTTCAAAAACAATGATTTTCTGGCTCTGGTCTATGAATACCTGTGTAATGGTAGTTTGGAAGATTGGATCAAGGGGAGGAGAAAATATGCAAGTGGAAATGGGTTGAACCTGATGGAGAGAGTGAATATAGCTATAGATGTTGCTAGTGCATTGGATTACCTGCACAATGATAGTGAAATCGCAGTTGTGCACTGTGATTTGAAGCCTAATAACATTCTATTGAATGAAGACATGACAGCAAAGGTTGGAGACTTTGGATTGGCTAGGTTGCTGATTCAAGGATCAACTAATCTAGTTTCCATTAACTCCACTCATGTCCTTGCGGGCTCACTTGGATACATAGCTCCAGAGTATGGATGGGGAGAGAAAGTATCTTCAGCTGGAGATGTATATAGTTTTGGTATAGTGTTACTAGAGCTCTTATCTGGGAAAAGCCCAACAGATGAATGTTTCACAGGAGGCCTAAGCATAAGAAGATGGGTGCAATCAGCATCGAAAGACAAGACAGTGCAGATCGTTGACCCTCAGTTGCTGTCCCCCATTTTTCATGATGAACCTTTTGAGGGACCAAATGCACAACTGAATTGTGTGCATGCAATTGTAGGAATTGCCTTATCTTGCACTGCAGAAAATCCAGATGAACGCATTGGCATTAGAGATGCTGTTCGTCAGTTAAAAGCTGTTAGAGACTCTCTTTCGAAACTGTCCGCTGAGACTCTTACACCTGCTCTTGAAACGTTGGGTTAA 3057 0.4122 MILFSHLLVHFASVLILLSLELHNFSIGESAVTLSITTDREALISFKSQLSNDTLNHLSSWNQNLSPCNWTGVLCDRLGQRVTGLDLSGLGLSGHLSPYIGNLSSLHSLQLQNNQFTGMIPDQIGNLFSLRILNMSSNMLEGKLPSNITHLNELQVLDLSSNRFVSKIPEDISNLEKLEVLKLGRNNFYGAIPASLGNISSLRNISFGTNSLTGWIPSDLGRLHDLIELDLTFNNLNGTVPPVIYNLSSLVNLALASNSLWGEIPKDLSHKFTKLVVFNICFNNFTGGIPGSLHNLTNIQVIRLASNHLEGTVPPGLGNLPFLRMYNIRHNRIVSSGVRGLDFITSLTNSTLLNFLAIDNNMLEGVIPQTIGNLSKNLSILYMGQNHFKGSIPSSIGHLSGLKLLNLSYNSISGEIPHELGQLQELQELSLAGNEISGDIPNSLGNLLKLNHIDLSRNRLMGGIPTSFGNLQNLLCMDLSSNQLNGSIPMEILNLPTLSNFLNLSMNFLSGPIPQIGRLSSVAIIDFSSNQLYGGIPSSLSNCLSLEKLLLARNQLSGPIPKALGDVKGLETLDLSSNQLSGNIPTEIQNLHGLKLLNLSYNDLEGGIPNDGVFQNLSAVHLEGNRNLCLHFYCLPHGNGSINIRLYIIIIGIMVTLILYLTIRILLHIKNKKAKVAAATSEQLKPHASMISYDELRMATEEFSQEKLLGVGSFGSVYKGHLSGGTTVAVKVLDTLRTGSLKSFFAECEALKNSRHRNLVKLITSCSSVDFKNNDFLALVYEYLCNGSLEDWIKGRRKYASGNGLNLMERVNIAIDVASALDYLHNDSEIAVVHCDLKPNNILLNEDMTAKVGDFGLARLLIQGSTNLVSINSTHVLAGSLGYIAPEYGWGEKVSSAGDVYSFGIVLLELLSGKSPTDECFTGGLSIRRWVQSASKDKTVQIVDPQLLSPIFHDEPFEGPNAQLNCVHAIVGIALSCTAENPDERIGIRDAVRQLKAVRDSLSKLSAETLTPALETLG 1018
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g02027 1018 Pfam Leucine rich repeat N-terminal domain 38 76 IPR013210 -
Pste3g02027 1018 ProSitePatterns Protein kinases ATP-binding region signature. 709 731 IPR017441 GO:0005524
Pste3g02027 1018 Gene3D Ribonuclease Inhibitor 342 635 IPR032675 -
Pste3g02027 1018 SMART serkin_6 703 998 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g02027 1018 Gene3D Transferase(Phosphotransferase) domain 1 784 1011 - -
Pste3g02027 1018 Pfam Protein kinase domain 704 992 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g02027 1018 Gene3D Ribonuclease Inhibitor 36 192 IPR032675 -
Pste3g02027 1018 SUPERFAMILY L domain-like 376 629 - -
Pste3g02027 1018 SMART LRR_sd22_2 447 473 - -
Pste3g02027 1018 SMART LRR_sd22_2 223 249 - -
Pste3g02027 1018 SMART LRR_sd22_2 423 442 - -
Pste3g02027 1018 SMART LRR_sd22_2 151 177 - -
Pste3g02027 1018 SMART LRR_sd22_2 567 593 - -
Pste3g02027 1018 SMART LRR_typ_2 223 247 IPR003591 -
Pste3g02027 1018 SMART LRR_typ_2 399 423 IPR003591 -
Pste3g02027 1018 SMART LRR_typ_2 151 175 IPR003591 -
Pste3g02027 1018 SMART LRR_typ_2 471 495 IPR003591 -
Pste3g02027 1018 SMART LRR_typ_2 296 320 IPR003591 -
Pste3g02027 1018 SMART LRR_typ_2 447 470 IPR003591 -
Pste3g02027 1018 SMART LRR_typ_2 567 590 IPR003591 -
Pste3g02027 1018 SMART LRR_typ_2 591 616 IPR003591 -
Pste3g02027 1018 SMART LRR_typ_2 103 127 IPR003591 -
Pste3g02027 1018 FunFam Inactive leucine-rich repeat receptor-like protein kinase 345 636 - -
Pste3g02027 1018 FunFam LRR receptor-like serine/threonine-protein kinase EFR 674 783 - -
Pste3g02027 1018 Gene3D Ribonuclease Inhibitor 193 270 IPR032675 -
Pste3g02027 1018 CDD STKc_IRAK 709 996 - -
Pste3g02027 1018 SUPERFAMILY L domain-like 37 333 - -
Pste3g02027 1018 Pfam Leucine Rich Repeat 449 471 IPR001611 GO:0005515
Pste3g02027 1018 Gene3D Ribonuclease Inhibitor 271 341 IPR032675 -
Pste3g02027 1018 Gene3D Phosphorylase Kinase; domain 1 683 783 - -
Pste3g02027 1018 ProSitePatterns Serine/Threonine protein kinases active-site signature. 832 844 IPR008271 GO:0004672|GO:0006468
Pste3g02027 1018 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 784 1008 - -
Pste3g02027 1018 ProSiteProfiles Protein kinase domain profile. 703 998 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g02027 1018 FunFam Putative leucine-rich repeat receptor-like protein kinase family protein 233 340 - -
Pste3g02027 1018 Coils Coil 988 1008 - -
Pste3g02027 1018 SUPERFAMILY Protein kinase-like (PK-like) 685 995 IPR011009 -
Pste3g02027 1018 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 274 996 - -
Pste3g02027 1018 Pfam Leucine rich repeat 377 436 IPR001611 GO:0005515
Pste3g02027 1018 Pfam Leucine rich repeat 545 604 IPR001611 GO:0005515
Pste3g02027 1018 Pfam Leucine rich repeat 105 164 IPR001611 GO:0005515
Pste3g02027 1018 FunFam Receptor protein kinase CLAVATA1 35 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g02027 Pste-Chr3 13902622 13905758 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g02027 38 1009 Receptor kinase-like Gene Family AT3G47570 41.793 0.0 680
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Pste3g02027 Pkinase 6.8e-43 CL0016