Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g02026 ATGGATATATAGCTTTATTAAAATGGTTTTGTAGGGATGTGGTGGCAAATTATCTTGTCTTGGGAGAAGAAGAAAAGATAGGTGGTTGAGTTGTCCACGTGGCAGGAAGCAACATGGGATGAGGATGGACATCTAGTTCTTATTGGTCCGAAATCTATCCACGATACCTTAAGATTTCTTGTACAGATTTCATCGTCCTAGTTGGCCTTGTATGAGATTTTCTCCTACTTGCACATAAAATGTCTCCAACTGCTGCATTTGCAAAAGCAGCCTCAATTTTCTGACTGTGTCTCCTAACAAGTTTATAGAGAGAAATGGCAGCTGCAACTGCAACATCTGGTGCTGTGTTAAATGGGTTGGGATCTTCCTTCTTGAGTGGAGGAAACAGGAGCCAAACTCTTCTGGCCACTGCTATTGGAGGCAAAGTTGGTGTTGCGGTTAGTCCCAGAAGCAGAAGATTCATTGTAGTAGCGGCTGCTGCACCAAAGAAGTCATGGCTCCCTGGCGTTAGAGGTGGCGGCAATTTCGTCGACCCTGAATGGCTTGATGGATCGCTACCAGGAGACTATGGTTTTGACCCACTAGGACTTGGGAAGGACCCAGCATTCCTGAAATGGTACAGAGAAGCAGAGCTAATTCATGGGAGATGGGCAATGGCAGCAGTAGTAGGCATCTTTGTGGGGCAGGCATGGAGTGGAGTGCCATGGTTTGAGGCTGGAGCTGACCCCAATGCAATTGCTCCTTTCTCCTTTGGTACTCTTTTGGGAACCCAGTTGCTTCTCATGGGGTGGGTTGAGAGTAAGAGATGGGTGGACTTCTTCAACCCAGACTCACAGTCAGTGGAATGGGCCACTCCATGGTCAAGAACAGCTGAGAACTTTGCCAATGCCACTGGTGAGCAAGGCTACCCAGGTGGCAAATTCTTTGACCCTTTGGGCTTTGCTGGCACTATTAAGGATGGTGTTTACATTCCAGATACAGACAAGCTCCAAAGATTGAAATTGGCTGAGATTAAGCATGCCAGGATTGCTATGTTAGCCATGCTCACTTTCTACTTTGAGGCCGGACAAGGGAAAACCCCCCTTTCCGCTCTTGGCTTGTAAACTAAACAATTCCATGTAGATAATTTAATTCACATTCTAGACACTTCCAAATCCTCTTTCTGTTACCCCTTCACAAATTCAAATTCTATCATGACTTCCTTTTATGTTTCTCTACTGTAATTTCCCCTACTTTCATTTACTTTTCCTTCCCCTACCACCTCTAGTTTAAGTGTCACATGGGACACTTAAAACTGTATACATTGGATTGCCATAAACAAATGCCAATTTCTTCATCCACGGAAGATAATCTGGCACTAAATAACCAAAGCACTCATATCATATGTAGAAGTATAACATAATGTTCACATAGATTTCATTGAAAATGCATACACTAAATTAAATGTTCACAATTTCTGCATTAAAAAATAGAAGCATTTAATTAAAATATGGGGGTAGAGTAATGAGAAAGGGGATATGCAGTAAAACTGTTTTACCATCTTTAAACTCTAATTTAATACTCTGTTTGCTCTTTTTTGTAAAAAAACAAGTGATGATTTAAAATATATTATCATTTATTTTTTTATATGGATGGAGAGGCAGTAATACTTTGGCTGATCATAATATGAAAAATATTGTACTTCTCTA 1688 0.4123 MAAATATSGAVLNGLGSSFLSGGNRSQTLLATAIGGKVGVAVSPRSRRFIVVAAAAPKKSWLPGVRGGGNFVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWSGVPWFEAGADPNAIAPFSFGTLLGTQLLLMGWVESKRWVDFFNPDSQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLGFAGTIKDGVYIPDTDKLQRLKLAEIKHARIAMLAMLTFYFEAGQGKTPLSALGL 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g02026 262 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 58 260 IPR001344 GO:0009765|GO:0016020
Pste3g02026 262 Gene3D Chlorophyll a/b binding protein domain 74 261 - -
Pste3g02026 262 Pfam Chlorophyll A-B binding protein 74 250 IPR022796 -
Pste3g02026 262 SUPERFAMILY Chlorophyll a-b binding protein 71 262 - -
Pste3g02026 262 FunFam Chlorophyll a-b binding protein, chloroplastic 74 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g02026 Pste-Chr3 13899191 13900993 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g02026 4 262 Chloroplast and Mitochondria Gene Families AT1G15820 79.151 7.91e-150 417