Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g02018 TTTTTTTTTTTTTTTTTTTGTTATTTGACTTGGTTGTCTGAATCGGTTGTTGCAGCAGGGTCGGGAGCCACAGCTATGCAGAGCCAACTTGTGTGCAATGGTTGTAGGAGCCTTCTGCTTTACCCCAGAGGGGCTACCAATGTTTGTTGTGCATTGTGCAACACAATTACCTCTGTTCCTCCTCCTGGGATGGAAATGTCCCAACTTTATTGTGGAGGTTGTAGGACATTGCTAATGTACACTCGTGGAGCTACAAGTGTGAGATGTTCTTGCTGTCATACTGTAAACCTTGTTCCAGCTCATGTCCATTGTGGGAACTGCCGGACAACACTCATGTATCCTTATGGAGCTCCCTCAGTCAAATGTGCTCTTTGTCACTATATTACTAATGTCAGTATGAACAATGGAAGGCTTCCAATCCCTGTTCATAGACCCAACGGGCCAACCAATGCTGGAACATTACCGTCTACTTCAACATCAATGCCCCAATCTCAAAGTCAAACAGTAGTGGTAGAAAATCCAATGTCTGTTGATTCAAGTGGGAAATTGGTGAGCAATGTTGTTGTTGGTGTCACAACGGATAAGAAATAACGGCATCACATATAAAAGGTACAGTACATGTCACGACGCATTACCACATCTGGCCTCACAGGAAGAAGATATTGTTTGTGTATATGAATATATATGATATTGCAGCCTGCAATGGTTTAATCAAAATCGATATTTTTTCCAATATAATAGTTGGACGGATATCATGTCTGTGTATGTATGAATGTATATGAGGTGGACAAGTCGTGAAAGGGCATAAAACCTATTTTGTGTGATGGCAAGAGCCTTCTTTGTTGTTTTCTTGGTATCCATGCCCAAATCAATTGGTTCATTCAGATTTATTATAACTTGATTTACAAGTCCTAAACTAGTAAATGCTACTGTTCTTTCATGGTTTGTGAAACTTGTGTTTCTCTTGGTGATCTTTTAGATACACG 986 0.4026 MQSQLVCNGCRSLLLYPRGATNVCCALCNTITSVPPPGMEMSQLYCGGCRTLLMYTRGATSVRCSCCHTVNLVPAHVHCGNCRTTLMYPYGAPSVKCALCHYITNVSMNNGRLPIPVHRPNGPTNAGTLPSTSTSMPQSQSQTVVVENPMSVDSSGKLVSNVVVGVTTDKK 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g02018 171 MobiDBLite consensus disorder prediction 119 138 - -
Pste3g02018 171 NCBIfam zinc finger domain, LSD1 subclass 4 34 IPR005735 -
Pste3g02018 171 NCBIfam zinc finger domain, LSD1 subclass 76 105 IPR005735 -
Pste3g02018 171 NCBIfam zinc finger domain, LSD1 subclass 43 73 IPR005735 -
Pste3g02018 171 MobiDBLite consensus disorder prediction 124 138 - -
Pste3g02018 171 PANTHER PROTEIN LSD1 2 170 IPR040319 -
Pste3g02018 171 Pfam LSD1 zinc finger 7 31 IPR005735 -
Pste3g02018 171 Pfam LSD1 zinc finger 79 103 IPR005735 -
Pste3g02018 171 Pfam LSD1 zinc finger 46 70 IPR005735 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g02018 Pste-Chr3 13781070 13786539 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-LSD Pste3g02018 zf-LSD1 8.2e-12 No_clan